BLASTX nr result

ID: Glycyrrhiza23_contig00027392 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027392
         (802 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535288.1| PREDICTED: probable actin-related protein 2/...   275   6e-72
ref|XP_003590151.1| Actin-related protein 2/3 complex subunit, p...   251   2e-64
emb|CBI23704.3| unnamed protein product [Vitis vinifera]              180   3e-43
ref|XP_002282041.2| PREDICTED: probable actin-related protein 2/...   179   6e-43
ref|XP_002311692.1| predicted protein [Populus trichocarpa] gi|2...   169   9e-40

>ref|XP_003535288.1| PREDICTED: probable actin-related protein 2/3 complex subunit
           2-like [Glycine max]
          Length = 368

 Score =  275 bits (704), Expect = 6e-72
 Identities = 135/153 (88%), Positives = 143/153 (93%)
 Frame = -1

Query: 802 PPPELRGEAFEDLSTNGGFFSFDISSRHVEGNRLDKTVWNLLNFNAYVRYHVKSTKGFIQ 623
           PPPELRGEAFEDLSTNGGFF+FDISSRHVEGNRLDKTVWNLLNFNAYVRYHVKSTKGFIQ
Sbjct: 215 PPPELRGEAFEDLSTNGGFFTFDISSRHVEGNRLDKTVWNLLNFNAYVRYHVKSTKGFIQ 274

Query: 622 RRMRKRLENLVEVLHQTNSEENEQTKQVKQHQGFRYTKKLVRSSKYNILKQKWGTFGRKI 443
           RRMRKRLE+LVEVLHQTN EENEQT   KQHQ +RYTKKLVRS+KY +LKQ+WGTFGRKI
Sbjct: 275 RRMRKRLESLVEVLHQTNLEENEQT---KQHQVYRYTKKLVRSAKYAVLKQRWGTFGRKI 331

Query: 442 KRIHFRLKIHGFTRFRQRWLRFPKFSSTEYTKL 344
           KRI FRLKIHGFTRFRQ+W RFPKF ST YTK+
Sbjct: 332 KRIRFRLKIHGFTRFRQQWFRFPKF-STGYTKI 363


>ref|XP_003590151.1| Actin-related protein 2/3 complex subunit, partial [Medicago
           truncatula] gi|355479199|gb|AES60402.1| Actin-related
           protein 2/3 complex subunit, partial [Medicago
           truncatula]
          Length = 191

 Score =  251 bits (640), Expect = 2e-64
 Identities = 131/155 (84%), Positives = 137/155 (88%), Gaps = 1/155 (0%)
 Frame = -1

Query: 802 PPPELRGEAFEDLSTNGGFFSFDISSRHVEGNRLDKTVWNLLNFNAYVRYHVKSTKGFIQ 623
           PPPEL GEA EDLSTNGGF SFDISSRH+EGNRLDKTVWNLLNFNA VRYHVKSTKGFIQ
Sbjct: 40  PPPELTGEALEDLSTNGGFVSFDISSRHIEGNRLDKTVWNLLNFNANVRYHVKSTKGFIQ 99

Query: 622 RRMRKRLENLVEVLHQTNSEENEQTKQVK-QHQGFRYTKKLVRSSKYNILKQKWGTFGRK 446
           RRMRKRLENLVEVLHQTNSEE EQTKQVK QHQG R TKKLVRSSK+  +K++W T GRK
Sbjct: 100 RRMRKRLENLVEVLHQTNSEEIEQTKQVKQQHQGRRSTKKLVRSSKHT-MKKRWYTLGRK 158

Query: 445 IKRIHFRLKIHGFTRFRQRWLRFPKFSSTEYTKLE 341
           IKRI FRLKIHGFTRFRQ W  F K SST+YTKLE
Sbjct: 159 IKRISFRLKIHGFTRFRQCW--FQKNSSTKYTKLE 191


>emb|CBI23704.3| unnamed protein product [Vitis vinifera]
          Length = 362

 Score =  180 bits (457), Expect = 3e-43
 Identities = 92/154 (59%), Positives = 113/154 (73%)
 Frame = -1

Query: 802 PPPELRGEAFEDLSTNGGFFSFDISSRHVEGNRLDKTVWNLLNFNAYVRYHVKSTKGFIQ 623
           PPPELRGE FEDLSTNGGF SFDI S HVEG +LDKTVW+LLNF AYV+YHVK T+GFIQ
Sbjct: 216 PPPELRGELFEDLSTNGGFVSFDIFSHHVEGKQLDKTVWSLLNFYAYVKYHVKCTRGFIQ 275

Query: 622 RRMRKRLENLVEVLHQTNSEENEQTKQVKQHQGFRYTKKLVRSSKYNILKQKWGTFGRKI 443
           RRM+ RLE+LVEVL   + EE E  ++V   +G R  +KLV  S+  +L ++        
Sbjct: 276 RRMKNRLESLVEVLQNASMEEEEHIQKV---EGCRCVRKLVSLSRSKVLNRRC----HFT 328

Query: 442 KRIHFRLKIHGFTRFRQRWLRFPKFSSTEYTKLE 341
           K+I   +KIHGF+RFRQ+WL  PKFS  +YTKL+
Sbjct: 329 KKIRSPIKIHGFSRFRQQWLTMPKFSLIKYTKLD 362


>ref|XP_002282041.2| PREDICTED: probable actin-related protein 2/3 complex subunit
           2-like [Vitis vinifera]
          Length = 368

 Score =  179 bits (454), Expect = 6e-43
 Identities = 92/157 (58%), Positives = 113/157 (71%), Gaps = 3/157 (1%)
 Frame = -1

Query: 802 PPPELRGEAFEDLSTNGGFFSFDISSRHVEGNRLDKTVWNLLNFNAYVRYHVKSTKGFIQ 623
           PPPELRGE FEDLSTNGGF SFDI S HVEG +LDKTVW+LLNF AYV+YHVK T+GFIQ
Sbjct: 216 PPPELRGELFEDLSTNGGFVSFDIFSHHVEGKQLDKTVWSLLNFYAYVKYHVKCTRGFIQ 275

Query: 622 RRMRKRLENLVEVLHQTNSEENEQTKQVK---QHQGFRYTKKLVRSSKYNILKQKWGTFG 452
           RRM+ RLE+LVEVL   + EE E  ++V+      G R  +KLV  S+  +L ++     
Sbjct: 276 RRMKNRLESLVEVLQNASMEEEEHIQKVEGKWSDAGCRCVRKLVSLSRSKVLNRRC---- 331

Query: 451 RKIKRIHFRLKIHGFTRFRQRWLRFPKFSSTEYTKLE 341
              K+I   +KIHGF+RFRQ+WL  PKFS  +YTKL+
Sbjct: 332 HFTKKIRSPIKIHGFSRFRQQWLTMPKFSLIKYTKLD 368


>ref|XP_002311692.1| predicted protein [Populus trichocarpa] gi|222851512|gb|EEE89059.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score =  169 bits (427), Expect = 9e-40
 Identities = 91/155 (58%), Positives = 102/155 (65%), Gaps = 1/155 (0%)
 Frame = -1

Query: 802 PPPELRGEAFEDLSTNGGFFSFDISSRHVEGNRLDKTVWNLLNFNAYVRYHVKSTKGFIQ 623
           PPPELRGE  EDLSTNGGF +FDISSRHVEG +LDKTVW+LLNF AYV+ HVK T+GFIQ
Sbjct: 216 PPPELRGEPLEDLSTNGGFVTFDISSRHVEGKKLDKTVWSLLNFYAYVKKHVKGTRGFIQ 275

Query: 622 RRMRKRLENLVEVLHQTNSEENEQTKQVKQHQGFRYTKKLVRSSKYNILKQKWGTFGRKI 443
           RRM+KRLE                      H   RY  KLV  SK    K++     RKI
Sbjct: 276 RRMQKRLET---------------------HAECRYVGKLVGLSKPKNFKRRCRDLTRKI 314

Query: 442 KRIHFRLKIHGFTRFRQRWLRFPKFSS-TEYTKLE 341
            +IHFR+KIHGF RF +RWL  PKFSS   YTKLE
Sbjct: 315 MQIHFRIKIHGFRRFHRRWLTIPKFSSPLRYTKLE 349


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