BLASTX nr result

ID: Glycyrrhiza23_contig00027381 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027381
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617396.1| Ribosomal RNA small subunit methyltransferas...   140   8e-32
ref|XP_003545221.1| PREDICTED: putative methyltransferase NSUN6-...   139   3e-31
ref|XP_002528046.1| RNA binding protein, putative [Ricinus commu...   129   2e-28
gb|AAF24826.1|AC007592_19 F12K11.10 [Arabidopsis thaliana]            124   8e-27
ref|NP_172143.3| NOL1/NOP2/sun-like protein [Arabidopsis thalian...   124   8e-27

>ref|XP_003617396.1| Ribosomal RNA small subunit methyltransferase B [Medicago
           truncatula] gi|355518731|gb|AET00355.1| Ribosomal RNA
           small subunit methyltransferase B [Medicago truncatula]
          Length = 572

 Score =  140 bits (354), Expect = 8e-32
 Identities = 65/66 (98%), Positives = 65/66 (98%)
 Frame = +2

Query: 2   KYLSLAPQHPKIGGPGLVGSCEFPDGYVEEWLRPGEEDLVQRFDPSSPLDTIGFFIAKFA 181
           KYLSLAPQHPKIGGPGLVGSCEFPDGY EEWLRPGEEDLVQRFDPSSPLDTIGFFIAKFA
Sbjct: 507 KYLSLAPQHPKIGGPGLVGSCEFPDGYAEEWLRPGEEDLVQRFDPSSPLDTIGFFIAKFA 566

Query: 182 VGSKDT 199
           VGSKDT
Sbjct: 567 VGSKDT 572


>ref|XP_003545221.1| PREDICTED: putative methyltransferase NSUN6-like [Glycine max]
          Length = 571

 Score =  139 bits (349), Expect = 3e-31
 Identities = 63/66 (95%), Positives = 65/66 (98%)
 Frame = +2

Query: 2   KYLSLAPQHPKIGGPGLVGSCEFPDGYVEEWLRPGEEDLVQRFDPSSPLDTIGFFIAKFA 181
           KYLSLAPQHP+IGGPGLVGSCEFPDGY+EEWLRPGEEDLVQRFDPSSPLDTIGFFIAKF 
Sbjct: 506 KYLSLAPQHPRIGGPGLVGSCEFPDGYIEEWLRPGEEDLVQRFDPSSPLDTIGFFIAKFL 565

Query: 182 VGSKDT 199
           VGSKDT
Sbjct: 566 VGSKDT 571


>ref|XP_002528046.1| RNA binding protein, putative [Ricinus communis]
           gi|223532576|gb|EEF34364.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 586

 Score =  129 bits (325), Expect = 2e-28
 Identities = 58/65 (89%), Positives = 64/65 (98%)
 Frame = +2

Query: 2   KYLSLAPQHPKIGGPGLVGSCEFPDGYVEEWLRPGEEDLVQRFDPSSPLDTIGFFIAKFA 181
           K+LSLAPQH ++GGPGLVGSCEFPDGY+EEWLRPGEE+LVQRFDPSSPLDTIGFFIAKFA
Sbjct: 521 KFLSLAPQHLRVGGPGLVGSCEFPDGYMEEWLRPGEEELVQRFDPSSPLDTIGFFIAKFA 580

Query: 182 VGSKD 196
           VG+KD
Sbjct: 581 VGTKD 585


>gb|AAF24826.1|AC007592_19 F12K11.10 [Arabidopsis thaliana]
          Length = 365

 Score =  124 bits (311), Expect = 8e-27
 Identities = 54/65 (83%), Positives = 62/65 (95%)
 Frame = +2

Query: 2   KYLSLAPQHPKIGGPGLVGSCEFPDGYVEEWLRPGEEDLVQRFDPSSPLDTIGFFIAKFA 181
           ++LSLAPQHP+IGGPGLVG CEFPDGY+EEWL+PGEE+LVQ+FDPSS LDTIGFFIAKF+
Sbjct: 301 RFLSLAPQHPRIGGPGLVGRCEFPDGYIEEWLKPGEEELVQKFDPSSELDTIGFFIAKFS 360

Query: 182 VGSKD 196
           VG KD
Sbjct: 361 VGPKD 365


>ref|NP_172143.3| NOL1/NOP2/sun-like protein [Arabidopsis thaliana]
           gi|30102680|gb|AAP21258.1| At1g06560 [Arabidopsis
           thaliana] gi|110743735|dbj|BAE99704.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332189884|gb|AEE28005.1| NOL1/NOP2/sun-like protein
           [Arabidopsis thaliana]
          Length = 599

 Score =  124 bits (311), Expect = 8e-27
 Identities = 54/65 (83%), Positives = 62/65 (95%)
 Frame = +2

Query: 2   KYLSLAPQHPKIGGPGLVGSCEFPDGYVEEWLRPGEEDLVQRFDPSSPLDTIGFFIAKFA 181
           ++LSLAPQHP+IGGPGLVG CEFPDGY+EEWL+PGEE+LVQ+FDPSS LDTIGFFIAKF+
Sbjct: 535 RFLSLAPQHPRIGGPGLVGRCEFPDGYIEEWLKPGEEELVQKFDPSSELDTIGFFIAKFS 594

Query: 182 VGSKD 196
           VG KD
Sbjct: 595 VGPKD 599


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