BLASTX nr result

ID: Glycyrrhiza23_contig00027346 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027346
         (213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621596.1| Pentatricopeptide repeat-containing protein ...    82   6e-14
ref|XP_003531893.1| PREDICTED: pentatricopeptide repeat-containi...    79   3e-13
ref|XP_003551784.1| PREDICTED: pentatricopeptide repeat-containi...    79   4e-13
ref|XP_002515260.1| pentatricopeptide repeat-containing protein,...    78   8e-13
ref|XP_003621600.1| Pentatricopeptide repeat-containing protein ...    74   9e-12

>ref|XP_003621596.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355496611|gb|AES77814.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 849

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 46/68 (67%), Positives = 50/68 (73%)
 Frame = +2

Query: 2   KNGLVESSMMLLDAMIAEGIKPNVVTYNSIIDAFGQLSALECVVDTSLQATEYPTEHSSS 181
           KNGLVESS+MLL AMI +GIKPNVVT+NSIIDA  Q   LE  V  S QA EYPTE  SS
Sbjct: 506 KNGLVESSIMLLIAMIEKGIKPNVVTFNSIIDASRQSPTLEYGVHGSSQAVEYPTEQLSS 565

Query: 182 MVITGTNQ 205
           M+I G  Q
Sbjct: 566 MLIDGAFQ 573


>ref|XP_003531893.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic-like [Glycine max]
          Length = 878

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 43/71 (60%), Positives = 50/71 (70%), Gaps = 3/71 (4%)
 Frame = +2

Query: 2   KNGLVESSMMLLDAMIAEGIKPNVVTYNSIIDAF---GQLSALECVVDTSLQATEYPTEH 172
           KNGL+ESS+ LLD M  +G +PNVVTYNSIIDAF    QL ALEC VDT  QA E+  + 
Sbjct: 519 KNGLIESSLRLLDVMTEKGSRPNVVTYNSIIDAFKIGQQLPALECAVDTPFQANEHQIKP 578

Query: 173 SSSMVITGTNQ 205
           SSS +I G  Q
Sbjct: 579 SSSRLIVGNFQ 589


>ref|XP_003551784.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic-like [Glycine max]
          Length = 875

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 43/71 (60%), Positives = 50/71 (70%), Gaps = 3/71 (4%)
 Frame = +2

Query: 2   KNGLVESSMMLLDAMIAEGIKPNVVTYNSIIDAF---GQLSALECVVDTSLQATEYPTEH 172
           KNGL+ESS+ LLD M  +G +PNVVTYNSIIDAF    QL ALEC VDTS QA E+  + 
Sbjct: 518 KNGLIESSLRLLDVMTEKGSRPNVVTYNSIIDAFRIGQQLPALECAVDTSFQANEHQIKP 577

Query: 173 SSSMVITGTNQ 205
           SSS +  G  Q
Sbjct: 578 SSSRLSAGNFQ 588


>ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545740|gb|EEF47244.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 878

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 39/63 (61%), Positives = 48/63 (76%)
 Frame = +2

Query: 2   KNGLVESSMMLLDAMIAEGIKPNVVTYNSIIDAFGQLSALECVVDTSLQATEYPTEHSSS 181
           KNGLVESS+ LLD M  EGI+PNVVTYNSIIDAFG+ ++ +CVVD S + T    E  SS
Sbjct: 518 KNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDAFGRSASAQCVVDDSGETTALQVESLSS 577

Query: 182 MVI 190
           +V+
Sbjct: 578 IVV 580


>ref|XP_003621600.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355496615|gb|AES77818.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 890

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 41/68 (60%), Positives = 49/68 (72%)
 Frame = +2

Query: 2   KNGLVESSMMLLDAMIAEGIKPNVVTYNSIIDAFGQLSALECVVDTSLQATEYPTEHSSS 181
           KNGL+ESS+MLL AM+ +GIKPNVVT+NSIIDA  Q   LE  V+ S  A +YP E SS 
Sbjct: 541 KNGLMESSIMLLMAMMEKGIKPNVVTFNSIIDASQQSPTLEYGVNGSSDAIDYPIEQSSP 600

Query: 182 MVITGTNQ 205
           +VI G  Q
Sbjct: 601 IVIDGAFQ 608


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