BLASTX nr result

ID: Glycyrrhiza23_contig00027342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027342
         (761 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003596703.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   205   7e-51
ref|XP_003612124.1| F-box family-3 [Medicago truncatula] gi|3555...   205   1e-50
ref|XP_003617561.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   187   3e-45
ref|XP_003628587.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   178   1e-42
ref|XP_003627028.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   177   2e-42

>ref|XP_003596703.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355485751|gb|AES66954.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 457

 Score =  205 bits (522), Expect = 7e-51
 Identities = 125/244 (51%), Positives = 159/244 (65%), Gaps = 4/244 (1%)
 Frame = -1

Query: 731 FQRFAVFVNGVLSLRSSREIRKMRLSCGHSVTDTFYAHSIDTWILAAVGPHIQELHLKLV 552
           F++FA FVN VLS+R SR+IRKMRLSCGHS  D F+++SID+WI +A G  +QEL + L 
Sbjct: 80  FRKFAAFVNSVLSIRRSRDIRKMRLSCGHSEVDPFFSNSIDSWIRSATGSCLQELDITLF 139

Query: 551 SSDRPRRSDRILGPSFLIPVALFNCPNLVSLRLCGGIHVRVQRSSAVRLPSLKMLELKIG 372
            +DR       L  + L P     C NLVSL LCG I+V ++RSSA  LPSLK L+L IG
Sbjct: 140 YTDREYVFSIFL--TILAP-----CTNLVSLSLCGDIYVVLERSSAFFLPSLKKLQLDIG 192

Query: 371 CVDVDSVNTLLSGCPILETLDLTFYAKFSTKVRIPPLPSLKRLKFKAQMG-KSYLQIDAP 195
            V+++S++ LLS CPILETL+L+       ++R+P  PSLKRLKF  +    +YL+IDAP
Sbjct: 193 YVEMNSMDNLLSSCPILETLELSISPDRLARLRVP--PSLKRLKFTVENNFGAYLEIDAP 250

Query: 194 DLKYLSIVQREFG---AVGNLQNVVEAYVDVFPGLREPYDGLREPVDSLLNFLRALSGTK 24
            LKYLS+V   FG    VGNL  V EAY+DVF           E VD L +  RALS  K
Sbjct: 251 GLKYLSLVNITFGDAATVGNLDQVEEAYLDVFSTPE------NESVDPLFDLFRALSRIK 304

Query: 23  HLLL 12
           HL+L
Sbjct: 305 HLVL 308


>ref|XP_003612124.1| F-box family-3 [Medicago truncatula] gi|355513459|gb|AES95082.1|
           F-box family-3 [Medicago truncatula]
          Length = 452

 Score =  205 bits (521), Expect = 1e-50
 Identities = 124/250 (49%), Positives = 160/250 (64%), Gaps = 6/250 (2%)
 Frame = -1

Query: 737 QRFQRFAVFVNGVLSL-RSSREIRKMRLSCGHSVTDT-FYAHSIDTWILAAVGPHIQELH 564
           +RF+ FA+ VNGVL+L R+ R I+KM LSC HS TD  F  +S++TW+ AA+GPH+ EL 
Sbjct: 76  ERFKSFALLVNGVLALLRNPRAIQKMSLSCVHSFTDDKFREYSVETWVRAAIGPHLHELE 135

Query: 563 LKLVSSDRPRRSDRILGPSFLIPVALFNCPNLVSLRLCGGIHVRVQRSSAVRLPSLKMLE 384
           L L   +          P F +P ALF+CPNLVSL L G +HV +Q S+AV LPSLKML 
Sbjct: 136 LTLFCDED--------APDFKLPQALFSCPNLVSLSLSGAVHVSIQHSTAVSLPSLKMLM 187

Query: 383 LKIGCVDVDSVNTLLSGCPILETLDLTFYAKFSTKVRIPPLPSLKRLKFKAQMG-KSYLQ 207
           + IG V+V SVN LL GC  +E LDL F A+   KV +P  PSLKRLK   +    +YL+
Sbjct: 188 IDIGYVEVSSVNALLDGCSSIEILDLGFSAQSLDKVCVP--PSLKRLKITIENDVGAYLE 245

Query: 206 IDAPDLKYLSIVQREFG---AVGNLQNVVEAYVDVFPGLREPYDGLREPVDSLLNFLRAL 36
           ++APDL+YL+I Q  FG   ++ +L NVVEAY+DVFP            +  L N   AL
Sbjct: 246 VNAPDLQYLNITQITFGEGFSLYSLPNVVEAYLDVFP-------TSLGSIVPLHNLFGAL 298

Query: 35  SGTKHLLLQR 6
           SG KHL+L R
Sbjct: 299 SGAKHLMLSR 308


>ref|XP_003617561.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355518896|gb|AET00520.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 462

 Score =  187 bits (474), Expect = 3e-45
 Identities = 114/248 (45%), Positives = 159/248 (64%), Gaps = 6/248 (2%)
 Frame = -1

Query: 737 QRFQRFAVFVNGVLSLRSSREIRKMRLSCGHSVTDTFYAHSIDTWILAAVGPHIQELHLK 558
           ++F  F+VFVN VL+LR SR +RK  LSC H   D FY HSIDTWI A +GP+++E HL 
Sbjct: 79  EQFLIFSVFVNTVLTLRKSRVVRKFCLSCYHVQLDPFYNHSIDTWINATIGPNLEEFHLT 138

Query: 557 LVSSDRPRRSDRILGPSFLIPVALFNCPNLVSLRLCGGIHVRVQRSSAVRLPSLKMLE-L 381
           L+++    R          +P++LF+CPNLVSL     I +++Q +S + LPSLK+L+ L
Sbjct: 139 LLTAAGFNR----------VPLSLFSCPNLVSLSFNDYIILQLQDNSKICLPSLKLLQLL 188

Query: 380 KIGCVDVDSVNTLLSGCPILETLDLTFYAKFSTKVRIPPLPSLKRLKFKAQMG-KSYLQI 204
            +  +D++SVN LLSGCP+LE L+++F  +    +R+    +LKRLK   +    +YL+I
Sbjct: 189 DMYNLDLNSVNALLSGCPVLENLEISFAPESLATLRLSS-STLKRLKIDVENEVGAYLEI 247

Query: 203 DAPDLKYLSIVQREF---GAVGNLQNVVEAYVDVFPGLREPYD-GLREPVDSLLNFLRAL 36
           DAPDLKYLS+    F    +VGNL NV EA++DVF   R P      E V+ +L  L+AL
Sbjct: 248 DAPDLKYLSLTNIMFLNAASVGNLHNVEEAHLDVFSTHRAPSSPSTSESVEPVLRLLQAL 307

Query: 35  SGTKHLLL 12
           SG KHL L
Sbjct: 308 SGIKHLKL 315


>ref|XP_003628587.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355522609|gb|AET03063.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 454

 Score =  178 bits (451), Expect = 1e-42
 Identities = 112/247 (45%), Positives = 151/247 (61%), Gaps = 5/247 (2%)
 Frame = -1

Query: 737 QRFQRFAVFVNGVLSLRSSREIRKMRLSCGHSVTDTFYAHSIDTWILAAVGPHIQELHLK 558
           ++F  F VFVN VLSLR SR +RK RLS  H   +  +A+S+DTW+  A+GPH+QE HL 
Sbjct: 78  EQFMLFTVFVNTVLSLRRSRVVRKFRLSSDHIPNNPLFAYSVDTWLSIAIGPHLQEFHLT 137

Query: 557 LVSSDRPRRSDRILGPSFLIPVALFNCPNLVSLRLCGGIHVRVQRSSAVRLPSLKMLE-L 381
           L ++          G    +P  LF+C NL+SL L G I + +Q    + LPSLK+L+ L
Sbjct: 138 LFTA----------GAFDNLPPTLFSCSNLISLSLSGYILLPLQDPLEICLPSLKVLQLL 187

Query: 380 KIGCVDVDSVNTLLSGCPILETLDLTFYAKFSTKVRIPPLPSLKRLKFKAQMG-KSYLQI 204
            +  +++ S++ LLS CP+LE L+L F  +    +R+P   SLKRLK        ++L+I
Sbjct: 188 NMHHLNLSSMHILLSACPVLENLELFFSPESLDIIRVP--SSLKRLKITVDNNVGAWLEI 245

Query: 203 DAPDLKYLS---IVQREFGAVGNLQNVVEAYVDVFPGLREPYDGLREPVDSLLNFLRALS 33
           DAP LKYLS   I  R+  AVGNL +V EAY+DVFP  +       E V+ LLN LRALS
Sbjct: 246 DAPGLKYLSLECITFRDAAAVGNLHSVEEAYLDVFPTPKS------ESVEPLLNLLRALS 299

Query: 32  GTKHLLL 12
           G KHL L
Sbjct: 300 GIKHLEL 306


>ref|XP_003627028.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355521050|gb|AET01504.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 451

 Score =  177 bits (450), Expect = 2e-42
 Identities = 115/258 (44%), Positives = 154/258 (59%), Gaps = 8/258 (3%)
 Frame = -1

Query: 761 DVHYHERLQRFQRFAVFVNGVLSLRSS-REIRKMRLSCGHSVT--DTFYAHSIDTWILAA 591
           D  Y +     ++F   V GVL+L  + R IRKMRL C HSV   D F+ HS+DTW+   
Sbjct: 63  DSLYSDNPIELKKFVFLVTGVLTLLPNPRGIRKMRLHCAHSVINDDNFHDHSLDTWVCPV 122

Query: 590 VGPHIQELHLKLVSSDRPRRSDRILGPSFLIPVALFNCPNLVSLRLCGGIHVRVQRSSAV 411
           +GP+++EL L L   D          P F +P++LF CPNLVSL +CGGIH+ VQ ++ +
Sbjct: 123 IGPYLEELDLDLYIDDEN-------APDFKLPLSLFTCPNLVSLSICGGIHLDVQSTTPI 175

Query: 410 RLPSLKMLELKI-GCVDVDSVNTLLSGCPILETLDLTFYAKFSTKVRIPPLPSLKRLKFK 234
            LPSLKML + + G V+V  VN LL GCP +E LDL F +     V +P   SLKRLK +
Sbjct: 176 SLPSLKMLLIDVLGNVEVAFVNALLYGCPNIEALDLHFLSDSLENVCLP--ASLKRLKIQ 233

Query: 233 AQMG-KSYLQIDAPDLKYLSIVQREF---GAVGNLQNVVEAYVDVFPGLREPYDGLREPV 66
                 S L+I+APDL+YL+I Q +F    ++ +  NVVEA +D+FP     Y+     V
Sbjct: 234 IDNDFGSSLEINAPDLEYLNIYQHKFIDVLSMNSFHNVVEASLDLFP---FSYNF----V 286

Query: 65  DSLLNFLRALSGTKHLLL 12
           D LL  L  LS TKHL+L
Sbjct: 287 DPLLKLLNTLSRTKHLVL 304


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