BLASTX nr result
ID: Glycyrrhiza23_contig00027330
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00027330
(451 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containi... 214 6e-54
ref|XP_002523547.1| pentatricopeptide repeat-containing protein,... 172 2e-41
ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containi... 169 2e-40
ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containi... 169 2e-40
ref|XP_002313273.1| predicted protein [Populus trichocarpa] gi|2... 168 4e-40
>ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 813
Score = 214 bits (545), Expect = 6e-54
Identities = 107/150 (71%), Positives = 123/150 (82%), Gaps = 1/150 (0%)
Frame = +3
Query: 3 CSDSGDEVMARIVHCYXXXXXXXXXXXXX-NALVDVYGKCGNEKASRKVFDEMDARTEVS 179
C+++ D+VMARIVHCY NALVDVYGKCG+EKAS+KVFDE+D R +S
Sbjct: 250 CAETEDKVMARIVHCYALKVGLLGGHVKVGNALVDVYGKCGSEKASKKVFDEIDERNVIS 309
Query: 180 WNAIITGLSFRGLFVDALDAFRLMIDAGMRPNCVTISSTLPVLGELGLFKMGMEVHGFSL 359
WNAIIT SFRG ++DALD FRLMID GMRPN VTISS LPVLGELGLFK+GMEVHGFSL
Sbjct: 310 WNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFKLGMEVHGFSL 369
Query: 360 RMGIESDIFVANSLIDMYAKSGSSCVASTI 449
+M IESD+F++NSLIDMYAKSGSS +ASTI
Sbjct: 370 KMAIESDVFISNSLIDMYAKSGSSRIASTI 399
Score = 91.7 bits (226), Expect = 6e-17
Identities = 44/120 (36%), Positives = 70/120 (58%)
Frame = +3
Query: 90 NALVDVYGKCGNEKASRKVFDEMDARTEVSWNAIITGLSFRGLFVDALDAFRLMIDAGMR 269
N+L+D+Y K G+ + + +F++M R VSWNA+I + L +A++ R M G
Sbjct: 381 NSLIDMYAKSGSSRIASTIFNKMGVRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGET 440
Query: 270 PNCVTISSTLPVLGELGLFKMGMEVHGFSLRMGIESDIFVANSLIDMYAKSGSSCVASTI 449
PN VT ++ LP LG +G E+H +R+G D+FV+N+L DMY+K G +A +
Sbjct: 441 PNNVTFTNVLPACARLGFLNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNV 500
Score = 87.4 bits (215), Expect = 1e-15
Identities = 54/145 (37%), Positives = 76/145 (52%), Gaps = 3/145 (2%)
Frame = +3
Query: 3 CSDSGDEVMARIVHCYXXXXXXXXXXXXXNALVDVYGKCGNEKASRKVFDEMDARTEVSW 182
CSD + R VH N L+ YG CG + KVFDEM R +VSW
Sbjct: 147 CSDFVEVRKGREVHGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVSW 206
Query: 183 NAIITGLSFRGLFVDALDAFRLMIDA--GMRPNCVTISSTLPVLGELGLFKMGMEVHGFS 356
N +I S G + +AL FR+M+ A G++P+ VT+ S LPV E M VH ++
Sbjct: 207 NTVIGLCSLHGFYEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIVHCYA 266
Query: 357 LRMG-IESDIFVANSLIDMYAKSGS 428
L++G + + V N+L+D+Y K GS
Sbjct: 267 LKVGLLGGHVKVGNALVDVYGKCGS 291
Score = 77.8 bits (190), Expect = 9e-13
Identities = 47/145 (32%), Positives = 73/145 (50%)
Frame = +3
Query: 15 GDEVMARIVHCYXXXXXXXXXXXXXNALVDVYGKCGNEKASRKVFDEMDARTEVSWNAII 194
G E+ ARI+ NAL D+Y KCG ++ VF+ + R EVS+N +I
Sbjct: 462 GKEIHARIIRV-----GSSLDLFVSNALTDMYSKCGCLNLAQNVFN-ISVRDEVSYNILI 515
Query: 195 TGLSFRGLFVDALDAFRLMIDAGMRPNCVTISSTLPVLGELGLFKMGMEVHGFSLRMGIE 374
G S +++L F M GMRP+ V+ + L + G E+HG +R
Sbjct: 516 IGYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQGKEIHGLLVRKLFH 575
Query: 375 SDIFVANSLIDMYAKSGSSCVASTI 449
+ +FVANSL+D+Y + G +A+ +
Sbjct: 576 THLFVANSLLDLYTRCGRIDLATKV 600
Score = 60.1 bits (144), Expect = 2e-07
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 2/113 (1%)
Frame = +3
Query: 93 ALVDVYGKCGNEKASRKVFDEMDA--RTEVSWNAIITGLSFRGLFVDALDAFRLMIDAGM 266
+L+ Y G+ S +F A R+ WN +I S G+F D + M+ AG+
Sbjct: 75 SLILQYASFGHPSNSLLLFQHSVAYSRSAFLWNTLIRANSIAGVF-DGFGTYNTMVRAGV 133
Query: 267 RPNCVTISSTLPVLGELGLFKMGMEVHGFSLRMGIESDIFVANSLIDMYAKSG 425
+P+ T L V + + G EVHG + ++G + D+FV N+L+ Y G
Sbjct: 134 KPDECTYPFVLKVCSDFVEVRKGREVHGVAFKLGFDGDVFVGNTLLAFYGNCG 186
>ref|XP_002523547.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223537254|gb|EEF38886.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 555
Score = 172 bits (437), Expect = 2e-41
Identities = 89/149 (59%), Positives = 107/149 (71%)
Frame = +3
Query: 3 CSDSGDEVMARIVHCYXXXXXXXXXXXXXNALVDVYGKCGNEKASRKVFDEMDARTEVSW 182
C+ DEV+A +HCY NALVDVYGKCGN K+SR+VFDEM R EVSW
Sbjct: 122 CAALEDEVVASEIHCYVVKIGLDSQVTLCNALVDVYGKCGNLKSSRRVFDEMMERNEVSW 181
Query: 183 NAIITGLSFRGLFVDALDAFRLMIDAGMRPNCVTISSTLPVLGELGLFKMGMEVHGFSLR 362
NAIIT L++ DAL+AFRLMI+ ++PN VTI+S LPVL EL F +G E+HGFSLR
Sbjct: 182 NAIITSLAYMEHNKDALEAFRLMINEEVKPNSVTIASILPVLVELEHFDLGKEIHGFSLR 241
Query: 363 MGIESDIFVANSLIDMYAKSGSSCVASTI 449
GIESD+F++NSLIDMYAKSG S AS +
Sbjct: 242 FGIESDVFISNSLIDMYAKSGHSTQASVV 270
Score = 85.9 bits (211), Expect = 3e-15
Identities = 44/114 (38%), Positives = 68/114 (59%), Gaps = 1/114 (0%)
Frame = +3
Query: 90 NALVDVYGKCGNEKASRKVFDEMDARTEVSWNAIITGLSFRGLFVDALDAFRLM-IDAGM 266
N L+ YG G ++KVFDEM R VSWN ++ S G ++ ALD F M + +G
Sbjct: 49 NTLLLFYGNTGYLSDAKKVFDEMLERDVVSWNTLLGAFSVNGFYLKALDLFYEMNLRSGF 108
Query: 267 RPNCVTISSTLPVLGELGLFKMGMEVHGFSLRMGIESDIFVANSLIDMYAKSGS 428
RPN VT+ S LPV L + E+H + +++G++S + + N+L+D+Y K G+
Sbjct: 109 RPNMVTVVSVLPVCAALEDEVVASEIHCYVVKIGLDSQVTLCNALVDVYGKCGN 162
Score = 83.2 bits (204), Expect = 2e-14
Identities = 42/112 (37%), Positives = 62/112 (55%)
Frame = +3
Query: 90 NALVDVYGKCGNEKASRKVFDEMDARTEVSWNAIITGLSFRGLFVDALDAFRLMIDAGMR 269
N+L+D+Y K G+ + VF M + VSWNA++ + + A++ R M G
Sbjct: 252 NSLIDMYAKSGHSTQASVVFHLMTEKNVVSWNAMVANFAQNRFELAAIELVRQMQTDGAI 311
Query: 270 PNCVTISSTLPVLGELGLFKMGMEVHGFSLRMGIESDIFVANSLIDMYAKSG 425
PN VT ++ LP +G + G E+H + RMG D FV+N+L DMYAK G
Sbjct: 312 PNPVTFTNALPACARMGFLRPGKEIHARAFRMGCYFDQFVSNALTDMYAKCG 363
Score = 71.6 bits (174), Expect = 6e-11
Identities = 43/120 (35%), Positives = 60/120 (50%)
Frame = +3
Query: 90 NALVDVYGKCGNEKASRKVFDEMDARTEVSWNAIITGLSFRGLFVDALDAFRLMIDAGMR 269
NAL D+Y KCG +R VF+ + R EVS+N +I G S ++L F M GM
Sbjct: 353 NALTDMYAKCGFLNLARNVFN-ISLRDEVSYNILIVGYSQTTNSSESLSLFLEMGLVGME 411
Query: 270 PNCVTISSTLPVLGELGLFKMGMEVHGFSLRMGIESDIFVANSLIDMYAKSGSSCVASTI 449
+ V+ + L K G E+H +R + IF+ANSL+D Y K G +A I
Sbjct: 412 RDVVSYMGVIAACASLVALKQGEEIHALVVRKNLHMHIFIANSLLDFYTKCGKIDLACKI 471
>ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 684
Score = 169 bits (429), Expect = 2e-40
Identities = 88/144 (61%), Positives = 103/144 (71%)
Frame = +3
Query: 18 DEVMARIVHCYXXXXXXXXXXXXXNALVDVYGKCGNEKASRKVFDEMDARTEVSWNAIIT 197
DE M R +HCY NALVD YGKCG+ KA +VF+E + EVSWN+II
Sbjct: 127 DEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIIN 186
Query: 198 GLSFRGLFVDALDAFRLMIDAGMRPNCVTISSTLPVLGELGLFKMGMEVHGFSLRMGIES 377
GL+ +G DAL+AFR+MIDAG +PN VTISS LPVL EL FK G E+HGFS+RMG E+
Sbjct: 187 GLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTET 246
Query: 378 DIFVANSLIDMYAKSGSSCVASTI 449
DIF+ANSLIDMYAKSG S ASTI
Sbjct: 247 DIFIANSLIDMYAKSGHSTEASTI 270
Score = 95.9 bits (237), Expect = 3e-18
Identities = 46/112 (41%), Positives = 67/112 (59%)
Frame = +3
Query: 90 NALVDVYGKCGNEKASRKVFDEMDARTEVSWNAIITGLSFRGLFVDALDAFRLMIDAGMR 269
N+L+D+Y K G+ + +F +D R VSWNA+I + L ++A+ M + G
Sbjct: 252 NSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGEC 311
Query: 270 PNCVTISSTLPVLGELGLFKMGMEVHGFSLRMGIESDIFVANSLIDMYAKSG 425
PN VT ++ LP LG G E+H +R+G+ SD+FV+NSLIDMYAK G
Sbjct: 312 PNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCG 363
Score = 86.7 bits (213), Expect = 2e-15
Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 1/143 (0%)
Frame = +3
Query: 3 CSDSGDEVMARIVHCYXXXXXXXXXXXXXNALVDVYGKCGNEKASRKVFDEMDARTEVSW 182
CSDS D VH N L+ +YG CG +R++FDEM R VSW
Sbjct: 20 CSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSW 79
Query: 183 NAIITGLSFRGLFVDALDA-FRLMIDAGMRPNCVTISSTLPVLGELGLFKMGMEVHGFSL 359
N II LS G + +A + F +++ + ++PN V++ S LP+ L +M +H +S+
Sbjct: 80 NTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSV 139
Query: 360 RMGIESDIFVANSLIDMYAKSGS 428
++G++S + N+L+D Y K GS
Sbjct: 140 KVGLDSQVTTCNALVDAYGKCGS 162
Score = 77.0 bits (188), Expect = 1e-12
Identities = 43/117 (36%), Positives = 65/117 (55%)
Frame = +3
Query: 90 NALVDVYGKCGNEKASRKVFDEMDARTEVSWNAIITGLSFRGLFVDALDAFRLMIDAGMR 269
N+L+D+Y KCG ++R VF+ + EVS+N +I G S + +L+ F M G +
Sbjct: 353 NSLIDMYAKCGCLHSARNVFNT-SRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKK 411
Query: 270 PNCVTISSTLPVLGELGLFKMGMEVHGFSLRMGIESDIFVANSLIDMYAKSGSSCVA 440
P+ V+ + L K G EVHG +LR + S +FV+NSL+D Y K G +A
Sbjct: 412 PDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIA 468
>ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 833
Score = 169 bits (429), Expect = 2e-40
Identities = 88/144 (61%), Positives = 103/144 (71%)
Frame = +3
Query: 18 DEVMARIVHCYXXXXXXXXXXXXXNALVDVYGKCGNEKASRKVFDEMDARTEVSWNAIIT 197
DE M R +HCY NALVD YGKCG+ KA +VF+E + EVSWN+II
Sbjct: 276 DEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIIN 335
Query: 198 GLSFRGLFVDALDAFRLMIDAGMRPNCVTISSTLPVLGELGLFKMGMEVHGFSLRMGIES 377
GL+ +G DAL+AFR+MIDAG +PN VTISS LPVL EL FK G E+HGFS+RMG E+
Sbjct: 336 GLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTET 395
Query: 378 DIFVANSLIDMYAKSGSSCVASTI 449
DIF+ANSLIDMYAKSG S ASTI
Sbjct: 396 DIFIANSLIDMYAKSGHSTEASTI 419
Score = 95.9 bits (237), Expect = 3e-18
Identities = 46/112 (41%), Positives = 67/112 (59%)
Frame = +3
Query: 90 NALVDVYGKCGNEKASRKVFDEMDARTEVSWNAIITGLSFRGLFVDALDAFRLMIDAGMR 269
N+L+D+Y K G+ + +F +D R VSWNA+I + L ++A+ M + G
Sbjct: 401 NSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGEC 460
Query: 270 PNCVTISSTLPVLGELGLFKMGMEVHGFSLRMGIESDIFVANSLIDMYAKSG 425
PN VT ++ LP LG G E+H +R+G+ SD+FV+NSLIDMYAK G
Sbjct: 461 PNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCG 512
Score = 86.7 bits (213), Expect = 2e-15
Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 1/143 (0%)
Frame = +3
Query: 3 CSDSGDEVMARIVHCYXXXXXXXXXXXXXNALVDVYGKCGNEKASRKVFDEMDARTEVSW 182
CSDS D VH N L+ +YG CG +R++FDEM R VSW
Sbjct: 169 CSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSW 228
Query: 183 NAIITGLSFRGLFVDALDA-FRLMIDAGMRPNCVTISSTLPVLGELGLFKMGMEVHGFSL 359
N II LS G + +A + F +++ + ++PN V++ S LP+ L +M +H +S+
Sbjct: 229 NTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSV 288
Query: 360 RMGIESDIFVANSLIDMYAKSGS 428
++G++S + N+L+D Y K GS
Sbjct: 289 KVGLDSQVTTCNALVDAYGKCGS 311
Score = 77.0 bits (188), Expect = 1e-12
Identities = 43/117 (36%), Positives = 65/117 (55%)
Frame = +3
Query: 90 NALVDVYGKCGNEKASRKVFDEMDARTEVSWNAIITGLSFRGLFVDALDAFRLMIDAGMR 269
N+L+D+Y KCG ++R VF+ + EVS+N +I G S + +L+ F M G +
Sbjct: 502 NSLIDMYAKCGCLHSARNVFNT-SRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKK 560
Query: 270 PNCVTISSTLPVLGELGLFKMGMEVHGFSLRMGIESDIFVANSLIDMYAKSGSSCVA 440
P+ V+ + L K G EVHG +LR + S +FV+NSL+D Y K G +A
Sbjct: 561 PDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIA 617
>ref|XP_002313273.1| predicted protein [Populus trichocarpa] gi|222849681|gb|EEE87228.1|
predicted protein [Populus trichocarpa]
Length = 680
Score = 168 bits (426), Expect = 4e-40
Identities = 88/149 (59%), Positives = 101/149 (67%)
Frame = +3
Query: 3 CSDSGDEVMARIVHCYXXXXXXXXXXXXXNALVDVYGKCGNEKASRKVFDEMDARTEVSW 182
C+ D V R +HCY NALVDVYGKCG K SR+VFDE+ R VSW
Sbjct: 119 CAGLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSW 178
Query: 183 NAIITGLSFRGLFVDALDAFRLMIDAGMRPNCVTISSTLPVLGELGLFKMGMEVHGFSLR 362
NAIIT L++ DAL+ FRLMID G++PN VT SS LPVL EL LF G E+HGFSLR
Sbjct: 179 NAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLR 238
Query: 363 MGIESDIFVANSLIDMYAKSGSSCVASTI 449
G+ESDIFVAN+LIDMYAKSG S AS +
Sbjct: 239 FGLESDIFVANALIDMYAKSGRSLQASNV 267
Score = 89.4 bits (220), Expect = 3e-16
Identities = 49/142 (34%), Positives = 74/142 (52%), Gaps = 1/142 (0%)
Frame = +3
Query: 3 CSDSGDEVMARIVHCYXXXXXXXXXXXXXNALVDVYGKCGNEKASRKVFDEMDARTEVSW 182
C+DS R +H N L+ YG CG K ++VFDEM R VSW
Sbjct: 17 CADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKRVFDEMLERDVVSW 76
Query: 183 NAIITGLSFRGLFVDALDAF-RLMIDAGMRPNCVTISSTLPVLGELGLFKMGMEVHGFSL 359
N++I S G + +A+ F + + +G RPN V+I S LPV L G ++H + +
Sbjct: 77 NSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQIHCYVV 136
Query: 360 RMGIESDIFVANSLIDMYAKSG 425
+ G++S + V N+L+D+Y K G
Sbjct: 137 KTGLDSQVTVGNALVDVYGKCG 158
Score = 88.6 bits (218), Expect = 5e-16
Identities = 43/112 (38%), Positives = 65/112 (58%)
Frame = +3
Query: 90 NALVDVYGKCGNEKASRKVFDEMDARTEVSWNAIITGLSFRGLFVDALDAFRLMIDAGMR 269
NAL+D+Y K G + VF+++ + VSWNA++ + L + A+D R M G
Sbjct: 249 NALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEI 308
Query: 270 PNCVTISSTLPVLGELGLFKMGMEVHGFSLRMGIESDIFVANSLIDMYAKSG 425
PN VT ++ LP +G + G E+H ++R G D+FV+N+L DMYAK G
Sbjct: 309 PNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCG 360
Score = 74.3 bits (181), Expect = 9e-12
Identities = 42/120 (35%), Positives = 65/120 (54%)
Frame = +3
Query: 90 NALVDVYGKCGNEKASRKVFDEMDARTEVSWNAIITGLSFRGLFVDALDAFRLMIDAGMR 269
NAL D+Y KCG +R+VF ++ R EVS+N +I G S ++L F M GM+
Sbjct: 350 NALTDMYAKCGCLNLARRVF-KISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMK 408
Query: 270 PNCVTISSTLPVLGELGLFKMGMEVHGFSLRMGIESDIFVANSLIDMYAKSGSSCVASTI 449
+ V+ + L K G EVHG ++R + + +F+AN+L+D Y K G +A +
Sbjct: 409 LDVVSYMGVISACANLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKV 468