BLASTX nr result

ID: Glycyrrhiza23_contig00027298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027298
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554421.1| PREDICTED: ABC transporter G family member 3...   149   2e-34
ref|XP_003625775.1| Pleiotropic drug resistance ABC transporter ...   145   3e-33
ref|XP_002277172.2| PREDICTED: pleiotropic drug resistance prote...   144   8e-33
emb|CBI30263.3| unnamed protein product [Vitis vinifera]              144   8e-33
ref|XP_002534113.1| ATP-binding cassette transporter, putative [...   144   8e-33

>ref|XP_003554421.1| PREDICTED: ABC transporter G family member 39-like [Glycine max]
          Length = 1437

 Score =  149 bits (377), Expect = 2e-34
 Identities = 69/85 (81%), Positives = 81/85 (95%)
 Frame = +3

Query: 6    SYWRHPQYNAVRFFMTIVIGVMFGLIFWNQAQEARKQQDLMNLLGAMYSAVLFLGATNAT 185
            SYWR+PQYNAVRFFMTIV+GVMFG+IFWN+A++  KQQDLMNLLG MY+A+LFLGA NA+
Sbjct: 1173 SYWRYPQYNAVRFFMTIVVGVMFGVIFWNKAKKTHKQQDLMNLLGGMYAAMLFLGAMNAS 1232

Query: 186  SVQPVVSIERSVFYRERAAGMYSAL 260
            SVQPVV+IER++FYRERAAGMYSAL
Sbjct: 1233 SVQPVVAIERTIFYRERAAGMYSAL 1257


>ref|XP_003625775.1| Pleiotropic drug resistance ABC transporter family protein [Medicago
            truncatula] gi|355500790|gb|AES81993.1| Pleiotropic drug
            resistance ABC transporter family protein [Medicago
            truncatula]
          Length = 1461

 Score =  145 bits (367), Expect = 3e-33
 Identities = 68/86 (79%), Positives = 79/86 (91%)
 Frame = +3

Query: 3    LSYWRHPQYNAVRFFMTIVIGVMFGLIFWNQAQEARKQQDLMNLLGAMYSAVLFLGATNA 182
            LSYWRH QYNAVRF MTI+IG++FGLIFW QA++ + QQDL+NLLGAMYSAVLFLGATN+
Sbjct: 1196 LSYWRHSQYNAVRFLMTIIIGLLFGLIFWKQAKKTKTQQDLLNLLGAMYSAVLFLGATNS 1255

Query: 183  TSVQPVVSIERSVFYRERAAGMYSAL 260
             +VQPVVSI R++FYRERAAGMYSAL
Sbjct: 1256 ATVQPVVSIARTIFYRERAAGMYSAL 1281


>ref|XP_002277172.2| PREDICTED: pleiotropic drug resistance protein 2 [Vitis vinifera]
          Length = 1434

 Score =  144 bits (363), Expect = 8e-33
 Identities = 66/85 (77%), Positives = 79/85 (92%)
 Frame = +3

Query: 6    SYWRHPQYNAVRFFMTIVIGVMFGLIFWNQAQEARKQQDLMNLLGAMYSAVLFLGATNAT 185
            SYWR+PQYNA+RFFMTIVIG +FG+IFWN+ ++  KQQDLMNLLGAMY+AVLFLGATNA+
Sbjct: 1170 SYWRNPQYNAIRFFMTIVIGALFGVIFWNKGEQTTKQQDLMNLLGAMYAAVLFLGATNAS 1229

Query: 186  SVQPVVSIERSVFYRERAAGMYSAL 260
            +VQ +V+IER+VFYRERAAGMYS L
Sbjct: 1230 AVQSIVAIERTVFYRERAAGMYSPL 1254


>emb|CBI30263.3| unnamed protein product [Vitis vinifera]
          Length = 1357

 Score =  144 bits (363), Expect = 8e-33
 Identities = 66/85 (77%), Positives = 79/85 (92%)
 Frame = +3

Query: 6    SYWRHPQYNAVRFFMTIVIGVMFGLIFWNQAQEARKQQDLMNLLGAMYSAVLFLGATNAT 185
            SYWR+PQYNA+RFFMTIVIG +FG+IFWN+ ++  KQQDLMNLLGAMY+AVLFLGATNA+
Sbjct: 1093 SYWRNPQYNAIRFFMTIVIGALFGVIFWNKGEQTTKQQDLMNLLGAMYAAVLFLGATNAS 1152

Query: 186  SVQPVVSIERSVFYRERAAGMYSAL 260
            +VQ +V+IER+VFYRERAAGMYS L
Sbjct: 1153 AVQSIVAIERTVFYRERAAGMYSPL 1177


>ref|XP_002534113.1| ATP-binding cassette transporter, putative [Ricinus communis]
            gi|223525836|gb|EEF28273.1| ATP-binding cassette
            transporter, putative [Ricinus communis]
          Length = 1437

 Score =  144 bits (363), Expect = 8e-33
 Identities = 66/85 (77%), Positives = 78/85 (91%)
 Frame = +3

Query: 6    SYWRHPQYNAVRFFMTIVIGVMFGLIFWNQAQEARKQQDLMNLLGAMYSAVLFLGATNAT 185
            SYWR+PQYNA+RFF+T++IG +FGLIFWN+ Q+  KQQDLMNLLGA+YSAV FLGA N +
Sbjct: 1173 SYWRNPQYNAIRFFLTVIIGTLFGLIFWNKGQKIGKQQDLMNLLGAIYSAVFFLGACNTS 1232

Query: 186  SVQPVVSIERSVFYRERAAGMYSAL 260
            SVQPVV+IER+VFYRERAAGMYSAL
Sbjct: 1233 SVQPVVAIERTVFYRERAAGMYSAL 1257


Top