BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027261
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537204.1| PREDICTED: DNA-directed RNA polymerase I sub...   114   8e-24
ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Me...    96   3e-18
ref|XP_003518107.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...    87   1e-15
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...    84   9e-15
emb|CBI29879.3| unnamed protein product [Vitis vinifera]               79   5e-13

>ref|XP_003537204.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
           max]
          Length = 1653

 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/83 (66%), Positives = 66/83 (79%)
 Frame = -2

Query: 251 SKCGSAEQLGENWTNLQFSEAMSVLRKFLMRTYRKCQNCGSVNPKISKPTYGWFHVNVLS 72
           S+C SAEQLGENWT+LQFSEAMSVLRK L + ++KCQ CG+ NPKISKPT+GWFH+NVLS
Sbjct: 164 SQCYSAEQLGENWTSLQFSEAMSVLRKLLTKKHKKCQKCGAKNPKISKPTFGWFHMNVLS 223

Query: 71  DYQARANVIRGNDTFLASETIND 3
             + RA+ IR     + SET ND
Sbjct: 224 ADETRADTIRS----VESETTND 242


>ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
           gi|355509045|gb|AES90187.1| DNA-directed RNA polymerase
           subunit beta [Medicago truncatula]
          Length = 1628

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 44/69 (63%), Positives = 56/69 (81%)
 Frame = -2

Query: 251 SKCGSAEQLGENWTNLQFSEAMSVLRKFLMRTYRKCQNCGSVNPKISKPTYGWFHVNVLS 72
           S+   AEQLGE+WT+LQFSEAMSV+ +FL + Y+KC NCG ++PKI+KPT+G F+V  LS
Sbjct: 158 SQWSGAEQLGESWTSLQFSEAMSVIYEFLAKDYKKCLNCGCISPKITKPTFGRFNVKALS 217

Query: 71  DYQARANVI 45
             QARANVI
Sbjct: 218 SVQARANVI 226


>ref|XP_003518107.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I
           subunit RPA190-like [Glycine max]
          Length = 1568

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 39/56 (69%), Positives = 49/56 (87%)
 Frame = -2

Query: 251 SKCGSAEQLGENWTNLQFSEAMSVLRKFLMRTYRKCQNCGSVNPKISKPTYGWFHV 84
           S+C SAE+LGENWT+LQFSEA SVLRKFL + + KCQ CG+ NP+ISKPT+GWF++
Sbjct: 208 SQCYSAEKLGENWTSLQFSEAXSVLRKFLTKKH-KCQECGAENPRISKPTFGWFYM 262


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
           communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
           polymerase I largest subunit, putative [Ricinus
           communis]
          Length = 1686

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 36/62 (58%), Positives = 47/62 (75%)
 Frame = -2

Query: 221 ENWTNLQFSEAMSVLRKFLMRTYRKCQNCGSVNPKISKPTYGWFHVNVLSDYQARANVIR 42
           + WT+LQF+EAMSVL  FL   ++KC+NC S NP I+KPT+GWFH + +SD   RANVI 
Sbjct: 180 QGWTSLQFTEAMSVLNNFLKPKFKKCKNCESSNPNITKPTFGWFHTSGMSDASIRANVIT 239

Query: 41  GN 36
           G+
Sbjct: 240 GH 241


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 34/62 (54%), Positives = 47/62 (75%)
 Frame = -2

Query: 221 ENWTNLQFSEAMSVLRKFLMRTYRKCQNCGSVNPKISKPTYGWFHVNVLSDYQARANVIR 42
           + WT+LQ  EAMSV+  FL   +R C+NC + +P+++KPT+GWFH+  LSD Q RANVIR
Sbjct: 178 QEWTSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIR 237

Query: 41  GN 36
           G+
Sbjct: 238 GS 239