BLASTX nr result

ID: Glycyrrhiza23_contig00027259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027259
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548572.1| PREDICTED: probable ATP-dependent DNA helica...   142   4e-32
ref|XP_004142851.1| PREDICTED: probable ATP-dependent DNA helica...   121   7e-26
ref|XP_002298526.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|NP_189410.2| rock-N-rollers protein [Arabidopsis thaliana] g...   119   3e-25
dbj|BAB02697.1| helicase-like protein [Arabidopsis thaliana]          119   3e-25

>ref|XP_003548572.1| PREDICTED: probable ATP-dependent DNA helicase HFM1-like [Glycine
           max]
          Length = 1195

 Score =  142 bits (357), Expect = 4e-32
 Identities = 67/74 (90%), Positives = 70/74 (94%)
 Frame = -2

Query: 227 NPVNYAIKKGISSDGLEKHVQEICVQKVNELSQYQMVWVDEDGFLLRPLDPGRLMTKYYL 48
           NP+NYAIKKGIS D LEKHVQ+ICV+KVNELSQ  MVWVDEDGFLLRPLDPGRLMTKYYL
Sbjct: 487 NPMNYAIKKGISGDRLEKHVQDICVRKVNELSQNDMVWVDEDGFLLRPLDPGRLMTKYYL 546

Query: 47  RFDTMKQIMRTPEN 6
           RFDTMKQIMRTPEN
Sbjct: 547 RFDTMKQIMRTPEN 560


>ref|XP_004142851.1| PREDICTED: probable ATP-dependent DNA helicase HFM1-like [Cucumis
           sativus] gi|449483903|ref|XP_004156727.1| PREDICTED:
           probable ATP-dependent DNA helicase HFM1-like [Cucumis
           sativus]
          Length = 1189

 Score =  121 bits (303), Expect = 7e-26
 Identities = 51/74 (68%), Positives = 65/74 (87%)
 Frame = -2

Query: 227 NPVNYAIKKGISSDGLEKHVQEICVQKVNELSQYQMVWVDEDGFLLRPLDPGRLMTKYYL 48
           NP  YAI+ GI +  +EKH+++IC++KVNELS++QM+W+DEDGFLL+PLDPGRLMTKYYL
Sbjct: 562 NPQKYAIRNGIPNHNMEKHMEDICIEKVNELSRHQMIWMDEDGFLLKPLDPGRLMTKYYL 621

Query: 47  RFDTMKQIMRTPEN 6
           +FDTMK IM  PEN
Sbjct: 622 KFDTMKHIMHAPEN 635


>ref|XP_002298526.1| predicted protein [Populus trichocarpa] gi|222845784|gb|EEE83331.1|
           predicted protein [Populus trichocarpa]
          Length = 984

 Score =  119 bits (298), Expect = 3e-25
 Identities = 52/74 (70%), Positives = 66/74 (89%)
 Frame = -2

Query: 227 NPVNYAIKKGISSDGLEKHVQEICVQKVNELSQYQMVWVDEDGFLLRPLDPGRLMTKYYL 48
           NP +YA+KKGIS D +EK +QEI VQKVNELS +QM+W D+DGFLL+PL+PGRLMT+YYL
Sbjct: 441 NPEHYAVKKGISRDRIEKQMQEITVQKVNELSHHQMIWTDKDGFLLKPLEPGRLMTRYYL 500

Query: 47  RFDTMKQIMRTPEN 6
           +F+TMK +M+TPEN
Sbjct: 501 KFNTMKHVMQTPEN 514


>ref|NP_189410.2| rock-N-rollers protein [Arabidopsis thaliana]
           gi|60172796|gb|AAX14498.1| meiotic recombination protein
           MER3 [Arabidopsis thaliana] gi|62001777|gb|AAX58606.1|
           ROCK-N-ROLLERS [Arabidopsis thaliana]
           gi|332643836|gb|AEE77357.1| rock-N-rollers protein
           [Arabidopsis thaliana]
          Length = 1133

 Score =  119 bits (297), Expect = 3e-25
 Identities = 51/72 (70%), Positives = 63/72 (87%)
 Frame = -2

Query: 227 NPVNYAIKKGISSDGLEKHVQEICVQKVNELSQYQMVWVDEDGFLLRPLDPGRLMTKYYL 48
           NP NYAIKKGI  D +EKH+QE+C+QK+NELSQYQM+W D DGF+L+P +PGRLMTKYYL
Sbjct: 487 NPENYAIKKGIPKDRVEKHLQELCLQKINELSQYQMIWTDTDGFVLKPEEPGRLMTKYYL 546

Query: 47  RFDTMKQIMRTP 12
           +F+TMK I+ TP
Sbjct: 547 KFETMKYIINTP 558


>dbj|BAB02697.1| helicase-like protein [Arabidopsis thaliana]
          Length = 1111

 Score =  119 bits (297), Expect = 3e-25
 Identities = 51/72 (70%), Positives = 63/72 (87%)
 Frame = -2

Query: 227 NPVNYAIKKGISSDGLEKHVQEICVQKVNELSQYQMVWVDEDGFLLRPLDPGRLMTKYYL 48
           NP NYAIKKGI  D +EKH+QE+C+QK+NELSQYQM+W D DGF+L+P +PGRLMTKYYL
Sbjct: 437 NPENYAIKKGIPKDRVEKHLQELCLQKINELSQYQMIWTDTDGFVLKPEEPGRLMTKYYL 496

Query: 47  RFDTMKQIMRTP 12
           +F+TMK I+ TP
Sbjct: 497 KFETMKYIINTP 508


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