BLASTX nr result

ID: Glycyrrhiza23_contig00027238 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027238
         (672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540628.1| PREDICTED: uncharacterized protein LOC100796...   380   e-103
ref|XP_003607275.1| Nucleoporin NUP188-like protein [Medicago tr...   378   e-103
ref|XP_002277289.2| PREDICTED: uncharacterized protein LOC100264...   336   3e-90
emb|CBI37915.3| unnamed protein product [Vitis vinifera]              336   3e-90
ref|XP_002313738.1| predicted protein [Populus trichocarpa] gi|2...   318   5e-85

>ref|XP_003540628.1| PREDICTED: uncharacterized protein LOC100796560 [Glycine max]
          Length = 1969

 Score =  380 bits (977), Expect = e-103
 Identities = 187/223 (83%), Positives = 205/223 (91%)
 Frame = +3

Query: 3   FSAFEMNEAGPLVLAWAVFLYLLMTLPGKDGNNELMEIDHIGYVRQAFEAGSLKYCVEIL 182
           F+AFEM EAGPLVLAWAVFLYLL+TL  KD NNELMEIDHI YVRQAFEAGSL+YC+EIL
Sbjct: 315 FNAFEMKEAGPLVLAWAVFLYLLLTLVEKDENNELMEIDHISYVRQAFEAGSLRYCLEIL 374

Query: 183 QCDILKDYDGPVSGYCSVLRTFISAFIASYEITLQPEDSNLTLILDILCKIYRGEESLCI 362
           +CDILK+YDGPVSGY  VLRTFISAF+ASYEI LQPEDSN TL+LDILCKIYRGEESLCI
Sbjct: 375 ECDILKEYDGPVSGYRGVLRTFISAFVASYEINLQPEDSNPTLMLDILCKIYRGEESLCI 434

Query: 363 QFWDKESFIDGPIRCLLCNLESEFPFRTVELVRLLSSLCEGTWPAECVYNFLDRSVGISS 542
           QFWDKESFIDGPIR LLCNLESEFPFRT+ELV+LLSSLCEGTWPAECVYNFL+RSVGISS
Sbjct: 435 QFWDKESFIDGPIRSLLCNLESEFPFRTLELVQLLSSLCEGTWPAECVYNFLNRSVGISS 494

Query: 543 LFEISSNLQADDVSHIVEAQQAVQVPGIEGLFVPSGTRGCVLK 671
           LFEISS+L+      +VEAQQAVQVPG+EG F+P+GTRG VL+
Sbjct: 495 LFEISSDLE------VVEAQQAVQVPGVEGFFIPAGTRGSVLR 531


>ref|XP_003607275.1| Nucleoporin NUP188-like protein [Medicago truncatula]
            gi|355508330|gb|AES89472.1| Nucleoporin NUP188-like
            protein [Medicago truncatula]
          Length = 1967

 Score =  378 bits (970), Expect = e-103
 Identities = 192/232 (82%), Positives = 203/232 (87%), Gaps = 9/232 (3%)
 Frame = +3

Query: 3    FSAFEMNEAGPLVLAWAVFLYLLMTLPGKDGNNELMEIDHIGYVRQAFEAGSLKYCVEIL 182
            FS FEMNEAGPL+LAWAVFLYLL TLPGK+GNNEL++IDHIGYVRQAFEAGSL YC++IL
Sbjct: 324  FSTFEMNEAGPLILAWAVFLYLLSTLPGKNGNNELIDIDHIGYVRQAFEAGSLHYCLKIL 383

Query: 183  QCDILKDYD---------GPVSGYCSVLRTFISAFIASYEITLQPEDSNLTLILDILCKI 335
            QCDILKDYD         GPVSGY SVLRTFISAFIASYEI LQPED+N TLILDI+CKI
Sbjct: 384  QCDILKDYDLYAFPMSIQGPVSGYRSVLRTFISAFIASYEINLQPEDNNSTLILDIICKI 443

Query: 336  YRGEESLCIQFWDKESFIDGPIRCLLCNLESEFPFRTVELVRLLSSLCEGTWPAECVYNF 515
            YRGEESLC+QFWDK S IDGPIR LL NLESEFP RTVELVRLLSSL EGTWPAECVY F
Sbjct: 444  YRGEESLCVQFWDKGSVIDGPIRSLLFNLESEFPVRTVELVRLLSSLSEGTWPAECVYTF 503

Query: 516  LDRSVGISSLFEISSNLQADDVSHIVEAQQAVQVPGIEGLFVPSGTRGCVLK 671
            LDRSVGISSL EISS+L ADDV HI+EA  AVQVPGIEGLF PSGTRG VLK
Sbjct: 504  LDRSVGISSLLEISSDLLADDVYHILEAPHAVQVPGIEGLFAPSGTRGRVLK 555


>ref|XP_002277289.2| PREDICTED: uncharacterized protein LOC100264071 [Vitis vinifera]
          Length = 1983

 Score =  336 bits (861), Expect = 3e-90
 Identities = 162/223 (72%), Positives = 188/223 (84%)
 Frame = +3

Query: 3   FSAFEMNEAGPLVLAWAVFLYLLMTLPGKDGNNELMEIDHIGYVRQAFEAGSLKYCVEIL 182
           F+AFE  EAGPL+L WAVFL L+ +LPGK  N+ LM+IDH+GYVRQAFEA SL Y +E+L
Sbjct: 327 FNAFETKEAGPLILTWAVFLCLISSLPGKQENSVLMDIDHVGYVRQAFEAASLSYFLELL 386

Query: 183 QCDILKDYDGPVSGYCSVLRTFISAFIASYEITLQPEDSNLTLILDILCKIYRGEESLCI 362
           Q DILKD DGPV+GY SVLRTF+SAFIASYEI +Q ED+ L LILDILCKIYRGEESLC 
Sbjct: 387 QSDILKDSDGPVAGYRSVLRTFVSAFIASYEINVQLEDNTLKLILDILCKIYRGEESLCN 446

Query: 363 QFWDKESFIDGPIRCLLCNLESEFPFRTVELVRLLSSLCEGTWPAECVYNFLDRSVGISS 542
           QFWD+ESF+DGPIRCLLCNLE EFP RTVELV  LS+LCEGTWPAECVYNFLD+SVGISS
Sbjct: 447 QFWDRESFVDGPIRCLLCNLEGEFPIRTVELVGFLSALCEGTWPAECVYNFLDKSVGISS 506

Query: 543 LFEISSNLQADDVSHIVEAQQAVQVPGIEGLFVPSGTRGCVLK 671
           L EI+S+   D++S I+E +  + VPG+EGL +PS TRG VLK
Sbjct: 507 LLEITSDSLVDNISQIIETRVPLHVPGVEGLIIPSQTRGHVLK 549


>emb|CBI37915.3| unnamed protein product [Vitis vinifera]
          Length = 1958

 Score =  336 bits (861), Expect = 3e-90
 Identities = 162/223 (72%), Positives = 188/223 (84%)
 Frame = +3

Query: 3   FSAFEMNEAGPLVLAWAVFLYLLMTLPGKDGNNELMEIDHIGYVRQAFEAGSLKYCVEIL 182
           F+AFE  EAGPL+L WAVFL L+ +LPGK  N+ LM+IDH+GYVRQAFEA SL Y +E+L
Sbjct: 327 FNAFETKEAGPLILTWAVFLCLISSLPGKQENSVLMDIDHVGYVRQAFEAASLSYFLELL 386

Query: 183 QCDILKDYDGPVSGYCSVLRTFISAFIASYEITLQPEDSNLTLILDILCKIYRGEESLCI 362
           Q DILKD DGPV+GY SVLRTF+SAFIASYEI +Q ED+ L LILDILCKIYRGEESLC 
Sbjct: 387 QSDILKDSDGPVAGYRSVLRTFVSAFIASYEINVQLEDNTLKLILDILCKIYRGEESLCN 446

Query: 363 QFWDKESFIDGPIRCLLCNLESEFPFRTVELVRLLSSLCEGTWPAECVYNFLDRSVGISS 542
           QFWD+ESF+DGPIRCLLCNLE EFP RTVELV  LS+LCEGTWPAECVYNFLD+SVGISS
Sbjct: 447 QFWDRESFVDGPIRCLLCNLEGEFPIRTVELVGFLSALCEGTWPAECVYNFLDKSVGISS 506

Query: 543 LFEISSNLQADDVSHIVEAQQAVQVPGIEGLFVPSGTRGCVLK 671
           L EI+S+   D++S I+E +  + VPG+EGL +PS TRG VLK
Sbjct: 507 LLEITSDSLVDNISQIIETRVPLHVPGVEGLIIPSQTRGHVLK 549


>ref|XP_002313738.1| predicted protein [Populus trichocarpa] gi|222850146|gb|EEE87693.1|
            predicted protein [Populus trichocarpa]
          Length = 740

 Score =  318 bits (816), Expect = 5e-85
 Identities = 157/223 (70%), Positives = 178/223 (79%)
 Frame = +3

Query: 3    FSAFEMNEAGPLVLAWAVFLYLLMTLPGKDGNNELMEIDHIGYVRQAFEAGSLKYCVEIL 182
            F      EAGPL+LAWAV L L+ +LPG + N+ LMEIDH+GYVRQAFE  SL   V++L
Sbjct: 332  FVTLGTREAGPLILAWAVCLCLISSLPGSEENSVLMEIDHVGYVRQAFEGASLSIFVDVL 391

Query: 183  QCDILKDYDGPVSGYCSVLRTFISAFIASYEITLQPEDSNLTLILDILCKIYRGEESLCI 362
            + D+LK+ DGPV+GY SVLRTFISAFIASYEI LQ EDS L+LILDILCKIYRGEESLCI
Sbjct: 392  ESDLLKESDGPVAGYRSVLRTFISAFIASYEINLQLEDSTLSLILDILCKIYRGEESLCI 451

Query: 363  QFWDKESFIDGPIRCLLCNLESEFPFRTVELVRLLSSLCEGTWPAECVYNFLDRSVGISS 542
            QFWDKESFIDGPIRCLLCNLE  FPFRT E VRLLS+LCEG+WPAECVYNFLD+ VG+SS
Sbjct: 452  QFWDKESFIDGPIRCLLCNLEGVFPFRTAEFVRLLSALCEGSWPAECVYNFLDKYVGVSS 511

Query: 543  LFEISSNLQADDVSHIVEAQQAVQVPGIEGLFVPSGTRGCVLK 671
            LFEI+S    D  S  VE Q  + VPG + L +PS TRG VLK
Sbjct: 512  LFEITSESLVDSASQAVETQLPLHVPGADSLIIPSKTRGHVLK 554


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