BLASTX nr result

ID: Glycyrrhiza23_contig00027237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027237
         (670 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625663.1| Chromodomain-helicase-DNA-binding protein [M...   214   2e-53
ref|XP_003520650.1| PREDICTED: uncharacterized protein LOC100813...   198   7e-49
ref|XP_002529415.1| mom(plant), putative [Ricinus communis] gi|2...    69   8e-10
ref|XP_003540760.1| PREDICTED: uncharacterized protein LOC100792...    64   2e-08
ref|XP_002330022.1| chromatin remodeling complex subunit [Populu...    64   3e-08

>ref|XP_003625663.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
            gi|355500678|gb|AES81881.1|
            Chromodomain-helicase-DNA-binding protein [Medicago
            truncatula]
          Length = 1564

 Score =  214 bits (544), Expect = 2e-53
 Identities = 110/184 (59%), Positives = 134/184 (72%)
 Frame = -2

Query: 669  SAIQSVLEDDLSGTVMPLYDFVYHSGRDHCNNHGDGVILQAPIDPAEPVNSSFISPDTLQ 490
            SA  S +ED LS +VMPL  F+ H+GRDH    G    LQA  DP E  +SSF+SP T Q
Sbjct: 1377 SASPSFMED-LSRSVMPLDRFINHNGRDHRYIRGSEERLQALYDPVELASSSFVSPVTSQ 1435

Query: 489  PSTYVPVNENATDDPHSISNPGYINNDNFQAHSVTSEMPHNAYPDPLLIELERIEMMNEE 310
            PS+Y P N NA   PH I+NPGY+++D FQAH VT +MPH A PDPLLIE+ERI  MNE 
Sbjct: 1436 PSSYAPWNGNAIHVPHDITNPGYMSSDPFQAHYVTYQMPHVADPDPLLIEMERIRKMNES 1495

Query: 309  AFKIHEKKRLQLQSDYKKEFQNLAEKYCMLLQNFNTEVELKGKELEKQCELVLMNMVLAE 130
            A K HE+K LQLQSDYKKEF+ L EK+CM+LQN NT V LK K+LE Q ++VLMNM+LA+
Sbjct: 1496 AVKTHEEKILQLQSDYKKEFETLCEKHCMMLQNVNTAVALKNKDLETQRDIVLMNMILAD 1555

Query: 129  AWIQ 118
             W++
Sbjct: 1556 VWVR 1559


>ref|XP_003520650.1| PREDICTED: uncharacterized protein LOC100813574 [Glycine max]
          Length = 1429

 Score =  198 bits (504), Expect = 7e-49
 Identities = 114/206 (55%), Positives = 133/206 (64%), Gaps = 19/206 (9%)
 Frame = -2

Query: 669  SAIQSVLEDDLSGTVMPLYDFVYHSGRDHCNNHGDGVILQAPIDPAEPVNSSFISPDTLQ 490
            SAI S  E++ + TVMPL D   HSG DH   H   VIL+AP D    +NSSF+SP   Q
Sbjct: 1204 SAIPSFPENNAASTVMPLDDIFRHSGEDHRYIHEAEVILEAPKD----LNSSFVSPVIPQ 1259

Query: 489  PSTYVPVNENATDDPHSISNPGYINNDNFQAHSVTSEMPHNAYPDPLL------------ 346
            P T VP+NENAT  PH I+ PG++N+D  +AHSVTSE+ H AY DPLL            
Sbjct: 1260 PFTSVPMNENATHAPHGITIPGFMNSDYSEAHSVTSEVSHLAYTDPLLGEMSIIENMNEE 1319

Query: 345  -------IELERIEMMNEEAFKIHEKKRLQLQSDYKKEFQNLAEKYCMLLQNFNTEVELK 187
                   IE+ERIE   EEAFKIHE+K LQLQSDY+KE + L+ KY MLLQN NTEV LK
Sbjct: 1320 AFIDLLPIEMERIEKEKEEAFKIHEQKILQLQSDYEKEVEKLSVKYKMLLQNVNTEVALK 1379

Query: 186  GKELEKQCELVLMNMVLAEAWIQKLD 109
              ELE QCELVL N VLA+ W   LD
Sbjct: 1380 RTELETQCELVLRNKVLAQVWTHNLD 1405


>ref|XP_002529415.1| mom(plant), putative [Ricinus communis] gi|223531092|gb|EEF32941.1|
            mom(plant), putative [Ricinus communis]
          Length = 1982

 Score = 68.9 bits (167), Expect = 8e-10
 Identities = 49/178 (27%), Positives = 79/178 (44%), Gaps = 2/178 (1%)
 Frame = -2

Query: 642  DLSGTVMPLYDFVYHSGRDHCNNHGDGVILQAPIDPAEPVNSSFISPDTLQPSTYVPVNE 463
            +++GT MP+ +          + HG       P D                    +PV+ 
Sbjct: 1586 NIAGTSMPMVEDQVQCSDLAISQHGTHTTQHLPAD--------------------IPVHG 1625

Query: 462  NAT--DDPHSISNPGYINNDNFQAHSVTSEMPHNAYPDPLLIELERIEMMNEEAFKIHEK 289
            + T   D  ++     +NN   Q        P   Y DPL +ELER+    ++    HE 
Sbjct: 1626 SGTHVSDTRTLPISSGVNNYTVQTVPPVRVPPLPFYHDPLQVELERLRKEADQIVNAHEN 1685

Query: 288  KRLQLQSDYKKEFQNLAEKYCMLLQNFNTEVELKGKELEKQCELVLMNMVLAEAWIQK 115
             +LQL+SD ++E   + +KY + LQ   +E  +K KE++   + VLMN +LAEA+  K
Sbjct: 1686 TKLQLKSDCEQEVAQIRKKYEVKLQELESEFLMKKKEMDMNEKKVLMNKILAEAFRSK 1743


>ref|XP_003540760.1| PREDICTED: uncharacterized protein LOC100792516 [Glycine max]
          Length = 2010

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
 Frame = -2

Query: 456  TDDPHSISNPGYINNDNFQ-AHSVTSEMPHNAYPDPLLIELERIEMMNEEAFKIHEKKRL 280
            + D  ++S    INN   Q A    S +  +   DPL  ELER+ ++ ++  K +E K+L
Sbjct: 1655 SSDTRNLSTLTEINNHPIQPASQSASRIIRHLCLDPLTNELERLRILTDQNMKEYENKKL 1714

Query: 279  QLQSDYKKEFQNLAEKYCMLLQNFNTEVELKGKELEKQCELVLMNMVLAEAWIQK 115
            QL+ D++KE + L  KY +  +    E +   K L+ Q  +VL+N +LAEA+  K
Sbjct: 1715 QLKYDFEKELEELYRKYDIKRKEVEVEFQNIRKNLDTQHNIVLVNKILAEAFRAK 1769


>ref|XP_002330022.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222871447|gb|EEF08578.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1441

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 51/147 (34%), Positives = 73/147 (49%), Gaps = 13/147 (8%)
 Frame = -2

Query: 516  SFISPDTLQPST----YVPVNENATDDPHS-ISN----PGYINNDNFQAHSVTSEMPHNA 364
            S  SP + Q +T    +VP++  A   P + ISN    P      N  A +    MP + 
Sbjct: 1028 SIDSPTSSQLTTSFAQHVPIDLIAVGGPQTHISNMRTEPVTSRISNHSATAPAVRMPVST 1087

Query: 363  YPDPLLIELERIEMMNEEAFKIHEKKRLQLQSDYKKEFQNLAEK----YCMLLQNFNTEV 196
              DPL  EL+RI    ++  KIHE  +L+L+SD +KE Q +  +    Y   LQ+   E 
Sbjct: 1088 SQDPLQNELDRIRTETDQIIKIHEDTKLRLKSDCEKEIQEVVAQIRRTYDFKLQDLEYEF 1147

Query: 195  ELKGKELEKQCELVLMNMVLAEAWIQK 115
              K KE++     VLMN +LAEA+  K
Sbjct: 1148 LRKKKEMDDNQSKVLMNKILAEAFRTK 1174


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