BLASTX nr result

ID: Glycyrrhiza23_contig00027236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027236
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532339.1| PREDICTED: LOB domain-containing protein 41-...    82   6e-14
ref|XP_003552728.1| PREDICTED: LOB domain-containing protein 41-...    73   4e-11
ref|XP_003555129.1| PREDICTED: LOB domain-containing protein 41-...    72   8e-11
ref|XP_003618732.1| LOB domain-containing protein [Medicago trun...    70   2e-10
gb|AFK42949.1| unknown [Medicago truncatula]                           70   2e-10

>ref|XP_003532339.1| PREDICTED: LOB domain-containing protein 41-like [Glycine max]
          Length = 296

 Score = 82.0 bits (201), Expect = 6e-14
 Identities = 46/65 (70%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
 Frame = +2

Query: 65  LFHDEPESNPNPNEIDRAEESGDEVGLELTLGFEPVSRADHVVPVKKRRTELKDWS-VSC 241
           LF DEPESNP    +DR     D+VGLELTLGFEPVS A HVVPVKKRR +LKD+S  SC
Sbjct: 233 LFRDEPESNPK--RLDRT----DDVGLELTLGFEPVSGAQHVVPVKKRRIDLKDFSGSSC 286

Query: 242 KMELG 256
           KMELG
Sbjct: 287 KMELG 291


>ref|XP_003552728.1| PREDICTED: LOB domain-containing protein 41-like [Glycine max]
          Length = 301

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 42/69 (60%), Positives = 48/69 (69%), Gaps = 5/69 (7%)
 Frame = +2

Query: 65  LFHDEPESNPNPNEIDRAEESGDEVGLELTLGFEPVSRADHVVPVKKRRTELKDW----- 229
           LF +EPE+NP        +   D+VGLELTLGFEPVSRA  VVPVKKRR ELK++     
Sbjct: 236 LFREEPETNP--------KRVSDDVGLELTLGFEPVSRARPVVPVKKRRIELKNFSGSAE 287

Query: 230 SVSCKMELG 256
           S SCKMELG
Sbjct: 288 SGSCKMELG 296


>ref|XP_003555129.1| PREDICTED: LOB domain-containing protein 41-like [Glycine max]
          Length = 293

 Score = 71.6 bits (174), Expect = 8e-11
 Identities = 42/73 (57%), Positives = 49/73 (67%), Gaps = 9/73 (12%)
 Frame = +2

Query: 65  LFHDEPESNPNPNEIDRAEESGDEVGLELTLGFEPVSRADHVVPVKKRR---------TE 217
           LFH+EPES    +  DR  ESG+E+GLELTLGFEPVSR  HVVP+KKR+         + 
Sbjct: 221 LFHEEPESVAKTS--DRTGESGNEIGLELTLGFEPVSRVHHVVPMKKRKIIASKSYGDSA 278

Query: 218 LKDWSVSCKMELG 256
            KD   SCKMELG
Sbjct: 279 EKD---SCKMELG 288


>ref|XP_003618732.1| LOB domain-containing protein [Medicago truncatula]
           gi|355493747|gb|AES74950.1| LOB domain-containing
           protein [Medicago truncatula]
          Length = 278

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 45/92 (48%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
 Frame = +2

Query: 2   ESSLSHPCKXXXXXXXXXXXXLFHDEPESNPNPNEI------DRAEES-GDEVGLELTLG 160
           ESSLS P K            LFHDE E  P            RAEE   D VGLEL LG
Sbjct: 182 ESSLSQPGKDSESGVSVETSILFHDESEFEPESQAKVKGRAEGRAEEGLSDGVGLELRLG 241

Query: 161 FEPVSRADHVVPVKKRRTELKDWSVSCKMELG 256
            EPVSR + +VP+KKR+  LKD S S K+ELG
Sbjct: 242 IEPVSREEFMVPIKKRKIVLKDCSASSKVELG 273


>gb|AFK42949.1| unknown [Medicago truncatula]
          Length = 287

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 41/66 (62%), Positives = 45/66 (68%), Gaps = 2/66 (3%)
 Frame = +2

Query: 65  LFHDEPESNPNPNEIDRAEESGDE-VGLELTLGFEPVSRADHVVPVKKRRTELKDWSV-S 238
           LF DEPE +      DR  E+G+E VGLELTLG EPVSR  HVVPVKKRR  LKD  V S
Sbjct: 217 LFRDEPELDRKMKPADRTGENGEEKVGLELTLGLEPVSRVYHVVPVKKRRVVLKDCGVGS 276

Query: 239 CKMELG 256
             +ELG
Sbjct: 277 WNVELG 282