BLASTX nr result

ID: Glycyrrhiza23_contig00027221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027221
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004169632.1| PREDICTED: signal recognition particle 43 kD...    77   1e-12
ref|XP_004144929.1| PREDICTED: signal recognition particle 43 kD...    77   1e-12
ref|XP_002282206.1| PREDICTED: signal recognition particle 43 kD...    77   2e-12
emb|CAN73168.1| hypothetical protein VITISV_027983 [Vitis vinifera]    77   2e-12
ref|XP_003537753.1| PREDICTED: signal recognition particle 43 kD...    76   2e-12

>ref|XP_004169632.1| PREDICTED: signal recognition particle 43 kDa protein,
           chloroplastic-like [Cucumis sativus]
          Length = 358

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 42/79 (53%), Positives = 53/79 (67%), Gaps = 5/79 (6%)
 Frame = -1

Query: 267 AGKTGDNSAFKSLLDSGDGCDVDVENTDSQSALLFVARLLAEACVRLLA----NLNHRDN 100
           A K  D SA KSL+DSGD  D D  + D ++ALLFV+ L +  CVR+LA    NLNHRDN
Sbjct: 116 AAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDN 175

Query: 99  S-GLVVLHMAMGYMRPQQI 46
           S G   LHMA GY++P+ +
Sbjct: 176 SGGFTALHMAAGYVKPETV 194


>ref|XP_004144929.1| PREDICTED: signal recognition particle 43 kDa protein,
           chloroplastic-like [Cucumis sativus]
           gi|449472373|ref|XP_004153574.1| PREDICTED: signal
           recognition particle 43 kDa protein, chloroplastic-like
           [Cucumis sativus]
          Length = 355

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 42/79 (53%), Positives = 53/79 (67%), Gaps = 5/79 (6%)
 Frame = -1

Query: 267 AGKTGDNSAFKSLLDSGDGCDVDVENTDSQSALLFVARLLAEACVRLLA----NLNHRDN 100
           A K  D SA KSL+DSGD  D D  + D ++ALLFV+ L +  CVR+LA    NLNHRDN
Sbjct: 116 AAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDN 175

Query: 99  S-GLVVLHMAMGYMRPQQI 46
           S G   LHMA GY++P+ +
Sbjct: 176 SGGFTALHMAAGYVKPETV 194


>ref|XP_002282206.1| PREDICTED: signal recognition particle 43 kDa protein,
           chloroplastic-like [Vitis vinifera]
          Length = 373

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 41/77 (53%), Positives = 55/77 (71%), Gaps = 6/77 (7%)
 Frame = -1

Query: 267 AGKTGDNSAFKSLLDSGDGCDVDVENTDSQSALLFVARLLAEACVRLL----ANLNHRDN 100
           A K  D++A K+LL+SGDG DVD  + + ++ALLF A L +EACV++L    A+LNHRDN
Sbjct: 124 AAKKADDAALKALLESGDGRDVDAVDENGRTALLFAAGLGSEACVQILADAGADLNHRDN 183

Query: 99  --SGLVVLHMAMGYMRP 55
              GL  LHMA GY++P
Sbjct: 184 GGGGLTALHMAAGYVKP 200


>emb|CAN73168.1| hypothetical protein VITISV_027983 [Vitis vinifera]
          Length = 373

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 41/77 (53%), Positives = 55/77 (71%), Gaps = 6/77 (7%)
 Frame = -1

Query: 267 AGKTGDNSAFKSLLDSGDGCDVDVENTDSQSALLFVARLLAEACVRLL----ANLNHRDN 100
           A K  D++A K+LL+SGDG DVD  + + ++ALLF A L +EACV++L    A+LNHRDN
Sbjct: 124 AAKKADDAALKALLESGDGRDVDAVDENGRTALLFAAGLGSEACVQILADAGADLNHRDN 183

Query: 99  --SGLVVLHMAMGYMRP 55
              GL  LHMA GY++P
Sbjct: 184 GGGGLTALHMAAGYVKP 200


>ref|XP_003537753.1| PREDICTED: signal recognition particle 43 kDa protein,
           chloroplastic-like [Glycine max]
          Length = 382

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 43/76 (56%), Positives = 52/76 (68%), Gaps = 5/76 (6%)
 Frame = -1

Query: 267 AGKTGDNSAFKSLLDSGDGCDVDVENTDSQSALLFVARLLAEACVRLL----ANLNHRDN 100
           A K  D SA K+L  S DG DVD  + D ++ALLFVA L +E+CV+LL    ANL+HRD 
Sbjct: 124 AAKKADESALKNLTKSDDGRDVDAVDADGRTALLFVAGLGSESCVKLLAEAGANLDHRDR 183

Query: 99  S-GLVVLHMAMGYMRP 55
           S GL  LHMA GY+RP
Sbjct: 184 SGGLAALHMAAGYVRP 199


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