BLASTX nr result

ID: Glycyrrhiza23_contig00027219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027219
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537861.1| PREDICTED: bifunctional dihydrofolate reduct...   123   2e-26
ref|XP_003603965.1| Dihydrofolate reductase-thymidylate synthase...   119   3e-25
ref|XP_003603964.1| Dihydrofolate reductase-thymidylate synthase...   119   3e-25
ref|XP_003603963.1| Dihydrofolate reductase-thymidylate synthase...   119   3e-25
dbj|BAF98221.1| CM0216.390.nc [Lotus japonicus]                       119   3e-25

>ref|XP_003537861.1| PREDICTED: bifunctional dihydrofolate reductase-thymidylate
           synthase-like [Glycine max]
          Length = 528

 Score =  123 bits (308), Expect = 2e-26
 Identities = 63/82 (76%), Positives = 64/82 (78%)
 Frame = -2

Query: 246 MASDSFVIXXXXXXXXXXXXXQRTYQAVVVATRDMGISKDGKMPWMLPTDLKFFEEITTI 67
           MASDS VI             QRTYQAVVVATRDMGISKD K+PW LPTDL FFEEITT 
Sbjct: 1   MASDSLVISNGNGNSKSEPHPQRTYQAVVVATRDMGISKDEKLPWTLPTDLNFFEEITTT 60

Query: 66  TSDPGKKNAVVMGRKTWESIPP 1
           TSDPGKKNAVVMGRKTWESIPP
Sbjct: 61  TSDPGKKNAVVMGRKTWESIPP 82


>ref|XP_003603965.1| Dihydrofolate reductase-thymidylate synthase [Medicago truncatula]
           gi|355493013|gb|AES74216.1| Dihydrofolate
           reductase-thymidylate synthase [Medicago truncatula]
          Length = 558

 Score =  119 bits (298), Expect = 3e-25
 Identities = 63/112 (56%), Positives = 71/112 (63%), Gaps = 14/112 (12%)
 Frame = -2

Query: 297 IPLHLQRNWLC--------------RLLT*VMASDSFVIXXXXXXXXXXXXXQRTYQAVV 160
           I LH Q+NWLC              R L+  MA DS  I              RTYQ VV
Sbjct: 3   IALHFQKNWLCSPYFHPNQSLSLCRRFLSSTMAGDSSAIFNGNGNGSINLQ--RTYQVVV 60

Query: 159 VATRDMGISKDGKMPWMLPTDLKFFEEITTITSDPGKKNAVVMGRKTWESIP 4
            AT++MGI KDGK+PW LPTDLKFF+EITT TS+PGKKNA+VMGRKTWESIP
Sbjct: 61  AATKEMGIGKDGKLPWRLPTDLKFFKEITTTTSEPGKKNAIVMGRKTWESIP 112


>ref|XP_003603964.1| Dihydrofolate reductase-thymidylate synthase [Medicago truncatula]
           gi|355493012|gb|AES74215.1| Dihydrofolate
           reductase-thymidylate synthase [Medicago truncatula]
          Length = 504

 Score =  119 bits (298), Expect = 3e-25
 Identities = 63/112 (56%), Positives = 71/112 (63%), Gaps = 14/112 (12%)
 Frame = -2

Query: 297 IPLHLQRNWLC--------------RLLT*VMASDSFVIXXXXXXXXXXXXXQRTYQAVV 160
           I LH Q+NWLC              R L+  MA DS  I              RTYQ VV
Sbjct: 14  IALHFQKNWLCSPYFHPNQSLSLCRRFLSSTMAGDSSAIFNGNGNGSINLQ--RTYQVVV 71

Query: 159 VATRDMGISKDGKMPWMLPTDLKFFEEITTITSDPGKKNAVVMGRKTWESIP 4
            AT++MGI KDGK+PW LPTDLKFF+EITT TS+PGKKNA+VMGRKTWESIP
Sbjct: 72  AATKEMGIGKDGKLPWRLPTDLKFFKEITTTTSEPGKKNAIVMGRKTWESIP 123


>ref|XP_003603963.1| Dihydrofolate reductase-thymidylate synthase [Medicago truncatula]
           gi|355493011|gb|AES74214.1| Dihydrofolate
           reductase-thymidylate synthase [Medicago truncatula]
          Length = 569

 Score =  119 bits (298), Expect = 3e-25
 Identities = 63/112 (56%), Positives = 71/112 (63%), Gaps = 14/112 (12%)
 Frame = -2

Query: 297 IPLHLQRNWLC--------------RLLT*VMASDSFVIXXXXXXXXXXXXXQRTYQAVV 160
           I LH Q+NWLC              R L+  MA DS  I              RTYQ VV
Sbjct: 14  IALHFQKNWLCSPYFHPNQSLSLCRRFLSSTMAGDSSAIFNGNGNGSINLQ--RTYQVVV 71

Query: 159 VATRDMGISKDGKMPWMLPTDLKFFEEITTITSDPGKKNAVVMGRKTWESIP 4
            AT++MGI KDGK+PW LPTDLKFF+EITT TS+PGKKNA+VMGRKTWESIP
Sbjct: 72  AATKEMGIGKDGKLPWRLPTDLKFFKEITTTTSEPGKKNAIVMGRKTWESIP 123


>dbj|BAF98221.1| CM0216.390.nc [Lotus japonicus]
          Length = 528

 Score =  119 bits (298), Expect = 3e-25
 Identities = 60/82 (73%), Positives = 64/82 (78%)
 Frame = -2

Query: 246 MASDSFVIXXXXXXXXXXXXXQRTYQAVVVATRDMGISKDGKMPWMLPTDLKFFEEITTI 67
           MASDS VI             QRTYQAVV+AT DMGISKDGK+PW LPTD KFFEEITT 
Sbjct: 1   MASDSLVISNGHDNGNLELSPQRTYQAVVIATPDMGISKDGKLPWALPTDQKFFEEITTK 60

Query: 66  TSDPGKKNAVVMGRKTWESIPP 1
           TSDPGKKNAVVMGRK+WE+IPP
Sbjct: 61  TSDPGKKNAVVMGRKSWEAIPP 82


Top