BLASTX nr result

ID: Glycyrrhiza23_contig00027215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027215
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004159645.1| PREDICTED: F-box protein CPR30-like [Cucumis...    89   4e-16
ref|XP_004147498.1| PREDICTED: F-box protein CPR30-like [Cucumis...    89   4e-16
dbj|BAJ52237.1| hypothetical protein [Pyrus pyrifolia]                 82   4e-14
dbj|BAK69449.1| S-locus F-box brothers2-S1 [Pyrus pyrifolia]           80   2e-13
ref|XP_002300154.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13

>ref|XP_004159645.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
          Length = 383

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 52/140 (37%), Positives = 81/140 (57%)
 Frame = +1

Query: 58  MESVPNLPQELVDDILTRLPYKSLVRFKCVCKYWYALFHDPLFLSRHLSHFIKNHNSGDS 237
           M S+PNLP  ++ DIL+RLP +SL+RFKCV K WYALF+DP F ++H S  +++ +    
Sbjct: 1   MASLPNLPDGVIIDILSRLPPESLLRFKCVRKSWYALFNDPKFKAKHFSTSLQHKH---- 56

Query: 238 VLLRLSFPTIFGDGLENYKLFSLSATSADCSAVETLIPKFNMLSTKFQICGHCNGILCFS 417
           +LL+       G+    + LF L  +     ++  +   F+     F+I GH +G+LC +
Sbjct: 57  ILLKRLVTKHSGNKENIFSLFKLPLSIHPSLSLSDIDLPFHEDFRFFEIRGHSHGLLCLT 116

Query: 418 IDYWPRSKEVLLYNPATREF 477
                  K++ L NP+TREF
Sbjct: 117 ----DLRKDIFLCNPSTREF 132


>ref|XP_004147498.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
          Length = 376

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 52/140 (37%), Positives = 81/140 (57%)
 Frame = +1

Query: 58  MESVPNLPQELVDDILTRLPYKSLVRFKCVCKYWYALFHDPLFLSRHLSHFIKNHNSGDS 237
           M S+PNLP  ++ DIL+RLP +SL+RFKCV K WYALF+DP F ++H S  +++ +    
Sbjct: 1   MASLPNLPDGVIIDILSRLPPESLLRFKCVRKSWYALFNDPKFKAKHFSTSLQHKH---- 56

Query: 238 VLLRLSFPTIFGDGLENYKLFSLSATSADCSAVETLIPKFNMLSTKFQICGHCNGILCFS 417
           +LL+       G+    + LF L  +     ++  +   F+     F+I GH +G+LC +
Sbjct: 57  ILLKRLVTKHSGNKENIFSLFKLPLSIHPSLSLSDIDLPFHEDFRFFEIRGHSHGLLCLT 116

Query: 418 IDYWPRSKEVLLYNPATREF 477
                  K++ L NP+TREF
Sbjct: 117 ----DLRKDIFLCNPSTREF 132


>dbj|BAJ52237.1| hypothetical protein [Pyrus pyrifolia]
          Length = 393

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 56/142 (39%), Positives = 81/142 (57%), Gaps = 9/142 (6%)
 Frame = +1

Query: 79  PQELVDDILTRLPYKSLVRFKCVCKYWYALFHDPLFLSRHLSHFIKNH-NSGDSVLLRLS 255
           P++ + +IL+RLP KSL+RFKC+ K W+ L + P F+++HL++   N  +S   +LL  S
Sbjct: 10  PEDKMVEILSRLPPKSLMRFKCIRKSWFTLINSPSFVAKHLNNSTDNKLSSSTCILLNRS 69

Query: 256 FPTIFGDGLENYKLF----SLSATSADCSA---VETLIPKFNMLSTKF-QICGHCNGILC 411
              IF D     ++F    +LS  S + +    VE LI  F +    F  I G+CNGILC
Sbjct: 70  QAHIFPDQSWKQEVFWSTINLSIDSDEHNLHYDVEDLIIPFPLEDHDFVLIFGYCNGILC 129

Query: 412 FSIDYWPRSKEVLLYNPATREF 477
             +      K VLL NPATR+F
Sbjct: 130 VDV-----GKNVLLCNPATRQF 146


>dbj|BAK69449.1| S-locus F-box brothers2-S1 [Pyrus pyrifolia]
          Length = 413

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 56/154 (36%), Positives = 83/154 (53%), Gaps = 9/154 (5%)
 Frame = +1

Query: 40  TSTNEVMESVPNLPQELVDDILTRLPYKSLVRFKCVCKYWYALFHDPLFLSRHLSHFIKN 219
           T   +V ES    P++ V +IL+RLP KSL+RFKC+ K W  + ++P F+++HLS+ + N
Sbjct: 15  TEMTQVRES--ETPEDRVAEILSRLPPKSLMRFKCIRKSWGTIINNPSFMAKHLSNSVDN 72

Query: 220 -HNSGDSVLLRLSFPTIFGD-GLENYKLFSLSATSADCSA------VETLIPKFNMLS-T 372
             +S   +LLR S   +F D   +    +S+   S D         VE L  +F +    
Sbjct: 73  KFSSSTCILLRRSQMPVFPDRSWKREHFWSMINLSHDSDEHNLYYDVEDLNIQFPLEDHD 132

Query: 373 KFQICGHCNGILCFSIDYWPRSKEVLLYNPATRE 474
              I G+CNGI+C  +      K  +LYNPATRE
Sbjct: 133 HVSIHGYCNGIVCLIV-----GKNAVLYNPATRE 161


>ref|XP_002300154.1| predicted protein [Populus trichocarpa] gi|222847412|gb|EEE84959.1|
           predicted protein [Populus trichocarpa]
          Length = 372

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 50/136 (36%), Positives = 74/136 (54%), Gaps = 2/136 (1%)
 Frame = +1

Query: 76  LPQELVDDILTRLPYKSLVRFKCVCKYWYALFHDPLFLSRHLSHFIKNHNSGDSVLLRLS 255
           LPQ+++ DILT LP KSL+RFKCVCK W++L  DP F+  HL    +  NS  S  L LS
Sbjct: 4   LPQDIMVDILTYLPVKSLLRFKCVCKLWHSLISDPKFVKSHLK-TAREVNSNKSQRLLLS 62

Query: 256 FPTIFGDGLENYKLFSLSATSADCSAVETLIPKFNMLSTKF--QICGHCNGILCFSIDYW 429
             T      ++    + S    D +  E   P     S  +   I G C+G++C  +DY 
Sbjct: 63  TRT-----PQSVDFEAASEGDEDNAVQELEYPDVVRCSPTYFIGIMGSCDGLICLFVDY- 116

Query: 430 PRSKEVLLYNPATREF 477
               +++L+NP+TR++
Sbjct: 117 ---AKLVLWNPSTRDY 129


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