BLASTX nr result

ID: Glycyrrhiza23_contig00027200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027200
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607275.1| Nucleoporin NUP188-like protein [Medicago tr...   129   2e-28
ref|XP_003540628.1| PREDICTED: uncharacterized protein LOC100796...   113   1e-23
ref|XP_002528258.1| conserved hypothetical protein [Ricinus comm...    83   3e-14
ref|XP_002277289.2| PREDICTED: uncharacterized protein LOC100264...    76   3e-12
ref|NP_195587.5| uncharacterized protein [Arabidopsis thaliana] ...    69   5e-10

>ref|XP_003607275.1| Nucleoporin NUP188-like protein [Medicago truncatula]
           gi|355508330|gb|AES89472.1| Nucleoporin NUP188-like
           protein [Medicago truncatula]
          Length = 1967

 Score =  129 bits (325), Expect = 2e-28
 Identities = 68/93 (73%), Positives = 70/93 (75%)
 Frame = +2

Query: 2   KNVWVVEIICNLVKNLPLNSYGAALMSMGVKILGIMLFCSPSNVTAVTLNVNLFDPTLQT 181
           KNVWVVE+ICNLVKN PLNSYGAALMSMG+KILGIML CSPSNVTAVTLN NLFD TLQT
Sbjct: 634 KNVWVVEMICNLVKNPPLNSYGAALMSMGLKILGIMLICSPSNVTAVTLNANLFDITLQT 693

Query: 182 XXXXXXXXXXXXXXXXXXXRLARMLLIDCEQNS 280
                              RLARMLLIDCEQNS
Sbjct: 694 TVFSVSSNGLSSGSWMLSGRLARMLLIDCEQNS 726


>ref|XP_003540628.1| PREDICTED: uncharacterized protein LOC100796560 [Glycine max]
          Length = 1969

 Score =  113 bits (283), Expect = 1e-23
 Identities = 63/96 (65%), Positives = 66/96 (68%), Gaps = 3/96 (3%)
 Frame = +2

Query: 2   KNVWVVEIICNLVKNLPLNSYGAALMSMGVKILGIMLFCSPSNVTAVTLNVNLFDPTLQT 181
           K VWVV+IICNLVKNL LNS GAALMSMGVKILGIML CSP+NV A TLN NLFD TLQT
Sbjct: 610 KRVWVVDIICNLVKNLTLNSCGAALMSMGVKILGIMLICSPANVAATTLNANLFDITLQT 669

Query: 182 ---XXXXXXXXXXXXXXXXXXXRLARMLLIDCEQNS 280
                                 +LARMLLIDCEQNS
Sbjct: 670 PTFNVGSNVLLSFYSGSWLLSCKLARMLLIDCEQNS 705


>ref|XP_002528258.1| conserved hypothetical protein [Ricinus communis]
           gi|223532295|gb|EEF34096.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1783

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 46/92 (50%), Positives = 57/92 (61%)
 Frame = +2

Query: 2   KNVWVVEIICNLVKNLPLNSYGAALMSMGVKILGIMLFCSPSNVTAVTLNVNLFDPTLQT 181
           +N WVV+IIC ++KNL   S GAA+MSMGV IL  ML CSPS+V A  L  N+F+ TL+T
Sbjct: 516 RNSWVVDIICAVIKNLSPTSAGAAVMSMGVSILAKMLKCSPSHVAAAALKSNIFEMTLKT 575

Query: 182 XXXXXXXXXXXXXXXXXXXRLARMLLIDCEQN 277
                              +LA+MLLIDCEQN
Sbjct: 576 ----------SIGSWMLPGKLAKMLLIDCEQN 597


>ref|XP_002277289.2| PREDICTED: uncharacterized protein LOC100264071 [Vitis vinifera]
          Length = 1983

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 41/88 (46%), Positives = 53/88 (60%)
 Frame = +2

Query: 14  VVEIICNLVKNLPLNSYGAALMSMGVKILGIMLFCSPSNVTAVTLNVNLFDPTLQTXXXX 193
           +VEIIC L++NL  N   +++M+MGV IL  ML CSPS+VTAV L  N+FD   +T    
Sbjct: 631 MVEIICTLIRNLSPNWSSSSMMAMGVSILEKMLKCSPSHVTAVALKANIFDLASKTSTFE 690

Query: 194 XXXXXXXXXXXXXXXRLARMLLIDCEQN 277
                          +LA+MLLIDCEQN
Sbjct: 691 TLFTGSTSGSWLLSGKLAKMLLIDCEQN 718


>ref|NP_195587.5| uncharacterized protein [Arabidopsis thaliana]
           gi|332661571|gb|AEE86971.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 1965

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 37/91 (40%), Positives = 54/91 (59%)
 Frame = +2

Query: 5   NVWVVEIICNLVKNLPLNSYGAALMSMGVKILGIMLFCSPSNVTAVTLNVNLFDPTLQTX 184
           +V VV+IICN V++L  +S GAA+M+M + IL  +L CSPS+V  + L  N+FD T  + 
Sbjct: 617 DVRVVDIICNSVRSLTFDSGGAAVMAMAIDILAKLLRCSPSSVAPMVLKSNIFDMTSCSD 676

Query: 185 XXXXXXXXXXXXXXXXXXRLARMLLIDCEQN 277
                             +LA+M+LIDCE+N
Sbjct: 677 VPDSGYNISLSGSWSLSGKLAKMILIDCEKN 707


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