BLASTX nr result
ID: Glycyrrhiza23_contig00027200
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00027200 (281 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003607275.1| Nucleoporin NUP188-like protein [Medicago tr... 129 2e-28 ref|XP_003540628.1| PREDICTED: uncharacterized protein LOC100796... 113 1e-23 ref|XP_002528258.1| conserved hypothetical protein [Ricinus comm... 83 3e-14 ref|XP_002277289.2| PREDICTED: uncharacterized protein LOC100264... 76 3e-12 ref|NP_195587.5| uncharacterized protein [Arabidopsis thaliana] ... 69 5e-10 >ref|XP_003607275.1| Nucleoporin NUP188-like protein [Medicago truncatula] gi|355508330|gb|AES89472.1| Nucleoporin NUP188-like protein [Medicago truncatula] Length = 1967 Score = 129 bits (325), Expect = 2e-28 Identities = 68/93 (73%), Positives = 70/93 (75%) Frame = +2 Query: 2 KNVWVVEIICNLVKNLPLNSYGAALMSMGVKILGIMLFCSPSNVTAVTLNVNLFDPTLQT 181 KNVWVVE+ICNLVKN PLNSYGAALMSMG+KILGIML CSPSNVTAVTLN NLFD TLQT Sbjct: 634 KNVWVVEMICNLVKNPPLNSYGAALMSMGLKILGIMLICSPSNVTAVTLNANLFDITLQT 693 Query: 182 XXXXXXXXXXXXXXXXXXXRLARMLLIDCEQNS 280 RLARMLLIDCEQNS Sbjct: 694 TVFSVSSNGLSSGSWMLSGRLARMLLIDCEQNS 726 >ref|XP_003540628.1| PREDICTED: uncharacterized protein LOC100796560 [Glycine max] Length = 1969 Score = 113 bits (283), Expect = 1e-23 Identities = 63/96 (65%), Positives = 66/96 (68%), Gaps = 3/96 (3%) Frame = +2 Query: 2 KNVWVVEIICNLVKNLPLNSYGAALMSMGVKILGIMLFCSPSNVTAVTLNVNLFDPTLQT 181 K VWVV+IICNLVKNL LNS GAALMSMGVKILGIML CSP+NV A TLN NLFD TLQT Sbjct: 610 KRVWVVDIICNLVKNLTLNSCGAALMSMGVKILGIMLICSPANVAATTLNANLFDITLQT 669 Query: 182 ---XXXXXXXXXXXXXXXXXXXRLARMLLIDCEQNS 280 +LARMLLIDCEQNS Sbjct: 670 PTFNVGSNVLLSFYSGSWLLSCKLARMLLIDCEQNS 705 >ref|XP_002528258.1| conserved hypothetical protein [Ricinus communis] gi|223532295|gb|EEF34096.1| conserved hypothetical protein [Ricinus communis] Length = 1783 Score = 82.8 bits (203), Expect = 3e-14 Identities = 46/92 (50%), Positives = 57/92 (61%) Frame = +2 Query: 2 KNVWVVEIICNLVKNLPLNSYGAALMSMGVKILGIMLFCSPSNVTAVTLNVNLFDPTLQT 181 +N WVV+IIC ++KNL S GAA+MSMGV IL ML CSPS+V A L N+F+ TL+T Sbjct: 516 RNSWVVDIICAVIKNLSPTSAGAAVMSMGVSILAKMLKCSPSHVAAAALKSNIFEMTLKT 575 Query: 182 XXXXXXXXXXXXXXXXXXXRLARMLLIDCEQN 277 +LA+MLLIDCEQN Sbjct: 576 ----------SIGSWMLPGKLAKMLLIDCEQN 597 >ref|XP_002277289.2| PREDICTED: uncharacterized protein LOC100264071 [Vitis vinifera] Length = 1983 Score = 75.9 bits (185), Expect = 3e-12 Identities = 41/88 (46%), Positives = 53/88 (60%) Frame = +2 Query: 14 VVEIICNLVKNLPLNSYGAALMSMGVKILGIMLFCSPSNVTAVTLNVNLFDPTLQTXXXX 193 +VEIIC L++NL N +++M+MGV IL ML CSPS+VTAV L N+FD +T Sbjct: 631 MVEIICTLIRNLSPNWSSSSMMAMGVSILEKMLKCSPSHVTAVALKANIFDLASKTSTFE 690 Query: 194 XXXXXXXXXXXXXXXRLARMLLIDCEQN 277 +LA+MLLIDCEQN Sbjct: 691 TLFTGSTSGSWLLSGKLAKMLLIDCEQN 718 >ref|NP_195587.5| uncharacterized protein [Arabidopsis thaliana] gi|332661571|gb|AEE86971.1| uncharacterized protein [Arabidopsis thaliana] Length = 1965 Score = 68.6 bits (166), Expect = 5e-10 Identities = 37/91 (40%), Positives = 54/91 (59%) Frame = +2 Query: 5 NVWVVEIICNLVKNLPLNSYGAALMSMGVKILGIMLFCSPSNVTAVTLNVNLFDPTLQTX 184 +V VV+IICN V++L +S GAA+M+M + IL +L CSPS+V + L N+FD T + Sbjct: 617 DVRVVDIICNSVRSLTFDSGGAAVMAMAIDILAKLLRCSPSSVAPMVLKSNIFDMTSCSD 676 Query: 185 XXXXXXXXXXXXXXXXXXRLARMLLIDCEQN 277 +LA+M+LIDCE+N Sbjct: 677 VPDSGYNISLSGSWSLSGKLAKMILIDCEKN 707