BLASTX nr result

ID: Glycyrrhiza23_contig00027192 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027192
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607275.1| Nucleoporin NUP188-like protein [Medicago tr...   166   1e-39
ref|XP_003540628.1| PREDICTED: uncharacterized protein LOC100796...   163   1e-38
ref|XP_002277289.2| PREDICTED: uncharacterized protein LOC100264...   133   2e-29
emb|CBI37915.3| unnamed protein product [Vitis vinifera]              133   2e-29
ref|NP_195587.5| uncharacterized protein [Arabidopsis thaliana] ...   130   1e-28

>ref|XP_003607275.1| Nucleoporin NUP188-like protein [Medicago truncatula]
           gi|355508330|gb|AES89472.1| Nucleoporin NUP188-like
           protein [Medicago truncatula]
          Length = 1967

 Score =  166 bits (421), Expect = 1e-39
 Identities = 86/119 (72%), Positives = 91/119 (76%)
 Frame = +2

Query: 146 MADTTNSVDASLWWDXXXXXXXXXXXXXXXXDLPRNLAKKLKDNHAWFVDTLSCFKPPNQ 325
           MADTT SVDASLWWD                DLP NLAKKLKDNHAWFVDTLSCFKPPNQ
Sbjct: 1   MADTT-SVDASLWWDSFTLLFTELEDSSLSSDLPLNLAKKLKDNHAWFVDTLSCFKPPNQ 59

Query: 326 KSKEALNSKKLKIGPQHLTIQPHLKDKALQISSCLQLDEVQSYILVERSIKHNNAAADS 502
           KSK+ALNSK +KIG   + I+P LKDKALQISSCL LDEVQSYILVER I+ NNAA DS
Sbjct: 60  KSKDALNSKNVKIGSHQMNIEPQLKDKALQISSCLLLDEVQSYILVERYIEDNNAAIDS 118


>ref|XP_003540628.1| PREDICTED: uncharacterized protein LOC100796560 [Glycine max]
          Length = 1969

 Score =  163 bits (413), Expect = 1e-38
 Identities = 89/120 (74%), Positives = 92/120 (76%), Gaps = 1/120 (0%)
 Frame = +2

Query: 146 MADTTNSVDASLWWDXXXXXXXXXXXXXXXXDLPRNLAKKLKDNHAWFVDTLSCFKPPNQ 325
           MADT+ SVDASLWWD                DLP NLAKKLKDNHAWFVDTL+ FKPPNQ
Sbjct: 1   MADTS-SVDASLWWDSFTVLFSELENSSLTSDLPPNLAKKLKDNHAWFVDTLTRFKPPNQ 59

Query: 326 KSKEALNSKKLKIGPQHLTIQPHLKDKALQISSCLQLDEVQSYILVERSIKHNNAA-ADS 502
            SKEAL+SK LKIG   LTIQP LKD ALQISSCL LDEVQSYILVERSIKHNNAA ADS
Sbjct: 60  SSKEALSSKTLKIGSHQLTIQPQLKDTALQISSCLLLDEVQSYILVERSIKHNNAAVADS 119


>ref|XP_002277289.2| PREDICTED: uncharacterized protein LOC100264071 [Vitis vinifera]
          Length = 1983

 Score =  133 bits (334), Expect = 2e-29
 Identities = 64/118 (54%), Positives = 82/118 (69%)
 Frame = +2

Query: 146 MADTTNSVDASLWWDXXXXXXXXXXXXXXXXDLPRNLAKKLKDNHAWFVDTLSCFKPPNQ 325
           +A   +SVD  LWWD                DLP  L KK+KDNHAWFVD  S FKPPN+
Sbjct: 12  LAPNPSSVDGLLWWDSFSLLLTELESVSPSSDLPPFLVKKVKDNHAWFVDMFSLFKPPNK 71

Query: 326 KSKEALNSKKLKIGPQHLTIQPHLKDKALQISSCLQLDEVQSYILVERSIKHNNAAAD 499
           KS+EAL+SK++KIG + LT+QP LK+ AL++S+ L LDEVQSY+LVER ++HNN A +
Sbjct: 72  KSREALDSKQVKIGTRQLTVQPELKEAALKVSNSLCLDEVQSYLLVERFVEHNNVAVN 129


>emb|CBI37915.3| unnamed protein product [Vitis vinifera]
          Length = 1958

 Score =  133 bits (334), Expect = 2e-29
 Identities = 64/118 (54%), Positives = 82/118 (69%)
 Frame = +2

Query: 146 MADTTNSVDASLWWDXXXXXXXXXXXXXXXXDLPRNLAKKLKDNHAWFVDTLSCFKPPNQ 325
           +A   +SVD  LWWD                DLP  L KK+KDNHAWFVD  S FKPPN+
Sbjct: 12  LAPNPSSVDGLLWWDSFSLLLTELESVSPSSDLPPFLVKKVKDNHAWFVDMFSLFKPPNK 71

Query: 326 KSKEALNSKKLKIGPQHLTIQPHLKDKALQISSCLQLDEVQSYILVERSIKHNNAAAD 499
           KS+EAL+SK++KIG + LT+QP LK+ AL++S+ L LDEVQSY+LVER ++HNN A +
Sbjct: 72  KSREALDSKQVKIGTRQLTVQPELKEAALKVSNSLCLDEVQSYLLVERFVEHNNVAVN 129


>ref|NP_195587.5| uncharacterized protein [Arabidopsis thaliana]
           gi|332661571|gb|AEE86971.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 1965

 Score =  130 bits (327), Expect = 1e-28
 Identities = 66/114 (57%), Positives = 79/114 (69%)
 Frame = +2

Query: 161 NSVDASLWWDXXXXXXXXXXXXXXXXDLPRNLAKKLKDNHAWFVDTLSCFKPPNQKSKEA 340
           NSVD+SLWWD                DLP+ +AKKL++NHAWFV TLS FKPP++KSKEA
Sbjct: 5   NSVDSSLWWDPFDSLLTDLENASLSDDLPQPIAKKLEENHAWFVGTLSMFKPPSEKSKEA 64

Query: 341 LNSKKLKIGPQHLTIQPHLKDKALQISSCLQLDEVQSYILVERSIKHNNAAADS 502
           LNS  +KI    L I+P LKDKAL+ISS L LDE+QSYILVERS++      DS
Sbjct: 65  LNSDLVKIKEHQLVIKPQLKDKALRISSHLNLDEIQSYILVERSMEQEYGTTDS 118


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