BLASTX nr result

ID: Glycyrrhiza23_contig00027174 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027174
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545107.1| PREDICTED: E3 ubiquitin-protein ligase ORTHR...   290   8e-77
ref|XP_003518578.1| PREDICTED: E3 ubiquitin-protein ligase ORTHR...   286   9e-76
ref|XP_003630722.1| E3 ubiquitin-protein ligase UHRF1 [Medicago ...   279   1e-73
ref|XP_003618072.1| E3 ubiquitin-protein ligase UHRF1 [Medicago ...   260   7e-68
ref|XP_002303746.1| predicted protein [Populus trichocarpa] gi|2...   254   4e-66

>ref|XP_003545107.1| PREDICTED: E3 ubiquitin-protein ligase ORTHRUS 2-like [Glycine max]
          Length = 624

 Score =  290 bits (742), Expect = 8e-77
 Identities = 131/153 (85%), Positives = 142/153 (92%)
 Frame = -3

Query: 464 RIEKCWRKNGIQGCKVCRYLFVRCDNEPAPWTSDDCGDRPRPLPEIGELKDAIDITERKG 285
           RIEKCWRKNGIQGCKVCRYLFVRCDNEPAPWTSD+ GDRPRPLP+I ELK A+D+TERKG
Sbjct: 374 RIEKCWRKNGIQGCKVCRYLFVRCDNEPAPWTSDEIGDRPRPLPKIDELKGAVDVTERKG 433

Query: 284 DPSWDFDEEKGCWLWKKPPPQSKKPVDIINPIDGTKIRVKRKAKEVTVKERLLKEFGCNI 105
           DPSWD+D EKGCWLWKKPPP+SKKPVDI +  +GT IRVKRKA+ V+VKERLLKEFGC I
Sbjct: 434 DPSWDYDPEKGCWLWKKPPPESKKPVDIKSE-NGTTIRVKRKAENVSVKERLLKEFGCQI 492

Query: 104 CRKVLAFPLTTPCAHNFCKACLEGAFSGQSFIR 6
           CRKV+A PLTTPCAHNFCKACLEGAFSGQSFIR
Sbjct: 493 CRKVMASPLTTPCAHNFCKACLEGAFSGQSFIR 525


>ref|XP_003518578.1| PREDICTED: E3 ubiquitin-protein ligase ORTHRUS 2-like [Glycine max]
          Length = 637

 Score =  286 bits (733), Expect = 9e-76
 Identities = 132/153 (86%), Positives = 138/153 (90%)
 Frame = -3

Query: 464 RIEKCWRKNGIQGCKVCRYLFVRCDNEPAPWTSDDCGDRPRPLPEIGELKDAIDITERKG 285
           RIEKCWRKNG QGCKVCRYLFVRCDNEPAPWTSD+ GDRPRPLP+I ELK A+DITERKG
Sbjct: 386 RIEKCWRKNGTQGCKVCRYLFVRCDNEPAPWTSDEIGDRPRPLPKIDELKGAVDITERKG 445

Query: 284 DPSWDFDEEKGCWLWKKPPPQSKKPVDIINPIDGTKIRVKRKAKEVTVKERLLKEFGCNI 105
           DPSWDFDEEKG WLWKKPPP+SKK VD I   DGT IRVKRKAK V+VKERLLKEFGC I
Sbjct: 446 DPSWDFDEEKGSWLWKKPPPESKKSVD-IKAEDGTTIRVKRKAKNVSVKERLLKEFGCQI 504

Query: 104 CRKVLAFPLTTPCAHNFCKACLEGAFSGQSFIR 6
           CRK +A PLTTPCAHNFCKACLEGAFSGQSFIR
Sbjct: 505 CRKAMASPLTTPCAHNFCKACLEGAFSGQSFIR 537


>ref|XP_003630722.1| E3 ubiquitin-protein ligase UHRF1 [Medicago truncatula]
           gi|355524744|gb|AET05198.1| E3 ubiquitin-protein ligase
           UHRF1 [Medicago truncatula]
          Length = 672

 Score =  279 bits (714), Expect = 1e-73
 Identities = 130/156 (83%), Positives = 142/156 (91%), Gaps = 3/156 (1%)
 Frame = -3

Query: 464 RIEKCWRKNGIQGCKVCRYLFVRCDNEPAPWTSDDCGDRPRPLPEIGELKDAIDITERKG 285
           RIEKCWRK GIQG KVCRYLFVRCDNEPAPWTSD  GDRPRPLP I E K AIDITERKG
Sbjct: 383 RIEKCWRKIGIQGHKVCRYLFVRCDNEPAPWTSDLSGDRPRPLPIIKEFKGAIDITERKG 442

Query: 284 DPSWDFDEEKGCWLWKKPPPQSKKPVDIINPIDGTKIRVKR-KAKEVT--VKERLLKEFG 114
           DPSWDFDEEKGCWLWKKPPP+SKKPV+I++P+DG+KI+V R K K+V+  +K+RLLKEFG
Sbjct: 443 DPSWDFDEEKGCWLWKKPPPRSKKPVNIVDPVDGSKIKVVRPKTKKVSFKIKDRLLKEFG 502

Query: 113 CNICRKVLAFPLTTPCAHNFCKACLEGAFSGQSFIR 6
           CNICRKVLA PLTTPCAHNFCKACLEGAFSGQS+IR
Sbjct: 503 CNICRKVLASPLTTPCAHNFCKACLEGAFSGQSYIR 538


>ref|XP_003618072.1| E3 ubiquitin-protein ligase UHRF1 [Medicago truncatula]
           gi|355519407|gb|AET01031.1| E3 ubiquitin-protein ligase
           UHRF1 [Medicago truncatula]
          Length = 696

 Score =  260 bits (665), Expect = 7e-68
 Identities = 118/156 (75%), Positives = 131/156 (83%), Gaps = 3/156 (1%)
 Frame = -3

Query: 464 RIEKCWRKNGIQGCKVCRYLFVRCDNEPAPWTSDDCGDRPRPLPEIGELKDAIDITERKG 285
           RIEKCWRK GIQG KVCRYLFVRCDNEPAPWTSD  GDRPRPLP I E K A+DITERK 
Sbjct: 389 RIEKCWRKVGIQGHKVCRYLFVRCDNEPAPWTSDLTGDRPRPLPTIKEFKGAVDITERKD 448

Query: 284 DPSWDFDEEKGCWLWKKPPPQSKKPVDIINPIDGTKIRVKRK---AKEVTVKERLLKEFG 114
           DPSWDFDEEKGCWLWKKPPP SKKP+++++  D TK+++ R         +K+RLLKEFG
Sbjct: 449 DPSWDFDEEKGCWLWKKPPPLSKKPMNVVDSFDPTKMKIVRPKAIKPSFKIKDRLLKEFG 508

Query: 113 CNICRKVLAFPLTTPCAHNFCKACLEGAFSGQSFIR 6
           CNICRKVLA PLTTPCAHNFCK CLEGAF+GQS+IR
Sbjct: 509 CNICRKVLASPLTTPCAHNFCKGCLEGAFAGQSYIR 544


>ref|XP_002303746.1| predicted protein [Populus trichocarpa] gi|222841178|gb|EEE78725.1|
           predicted protein [Populus trichocarpa]
          Length = 673

 Score =  254 bits (650), Expect = 4e-66
 Identities = 117/156 (75%), Positives = 132/156 (84%), Gaps = 2/156 (1%)
 Frame = -3

Query: 464 RIEKCWRKNGIQGCKVCRYLFVRCDNEPAPWTSDDCGDRPRPLPEIGELKDAIDITERKG 285
           RIEKCWRKNGIQG KVCRYLFVRCDNEPAPWTSD  GDRPRPLP I ELK+AIDITERKG
Sbjct: 389 RIEKCWRKNGIQGFKVCRYLFVRCDNEPAPWTSDVQGDRPRPLPVIKELKNAIDITERKG 448

Query: 284 DPSWDFDEEKGCWLWKKPPPQSKKPV-DIINPIDGTKIR-VKRKAKEVTVKERLLKEFGC 111
            PSWD+++EK CW+WKKPPP SKK V D + P DG  IR +KR+   ++V+E+LLKEF C
Sbjct: 449 SPSWDYEDEKSCWMWKKPPPASKKRVADSVGPEDGKVIRIIKRQKANISVREKLLKEFSC 508

Query: 110 NICRKVLAFPLTTPCAHNFCKACLEGAFSGQSFIRQ 3
            ICRKV+A P+TTPCAHNFCKACLEGAF+GQS  RQ
Sbjct: 509 QICRKVMANPITTPCAHNFCKACLEGAFAGQSLTRQ 544


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