BLASTX nr result

ID: Glycyrrhiza23_contig00027164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027164
         (646 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517934.1| PREDICTED: chromodomain-helicase-DNA-binding...   326   2e-87
ref|XP_002326828.1| chromatin remodeling complex subunit [Populu...   247   2e-63
ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding...   237   2e-60
emb|CAN83037.1| hypothetical protein VITISV_034336 [Vitis vinifera]   237   2e-60
ref|XP_002511628.1| helicase, putative [Ricinus communis] gi|223...   236   4e-60

>ref|XP_003517934.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Glycine
            max]
          Length = 1482

 Score =  326 bits (836), Expect = 2e-87
 Identities = 162/197 (82%), Positives = 177/197 (89%)
 Frame = -1

Query: 646  DTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLCINLVTEHTVEEVIMRRAERKLQLSLNV 467
            DTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLCINLVTE TVEEVIMRRAERKL LSLNV
Sbjct: 1070 DTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLCINLVTERTVEEVIMRRAERKLLLSLNV 1129

Query: 466  TGDNILEHEDKRTSAVGTSDLKSIIFGLHMFDPNEIDDGKHRDMDLPEINAMADKVIAMR 287
             GDNIL+ ++K  S VG+ DLKSIIFGLHMFDP EI+DG HR+M++PEI AMAD+V+AMR
Sbjct: 1130 IGDNILKDDNKEPSEVGSGDLKSIIFGLHMFDPTEINDGNHRNMNIPEICAMADRVLAMR 1189

Query: 286  DEQIVDKDDRKIEVNPRNYLKGYNVKEGGSASLSCDIGLDEASYLSWVKKFEEVSKSSCD 107
            DEQI+D D+RK EVNP N LKG  VKE  SASLSCD+GLDEASYLSWVKKFEEVSKSSCD
Sbjct: 1190 DEQILDNDERKFEVNPTNILKGDAVKERDSASLSCDLGLDEASYLSWVKKFEEVSKSSCD 1249

Query: 106  SIVDMRSRRNLDEEKSL 56
            SI D+RSRRN+DEEKSL
Sbjct: 1250 SITDLRSRRNVDEEKSL 1266


>ref|XP_002326828.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222835143|gb|EEE73578.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 866

 Score =  247 bits (630), Expect = 2e-63
 Identities = 123/198 (62%), Positives = 157/198 (79%), Gaps = 1/198 (0%)
 Frame = -1

Query: 646  DTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLCINLVTEHTVEEVIMRRAERKLQLSLNV 467
            DTVIFYEQDWNPQVDKQALQRAHRIGQMNHVL INLVT H+VEEVIM+RA+RKLQLS +V
Sbjct: 459  DTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTRHSVEEVIMQRAKRKLQLSHDV 518

Query: 466  TGDNILEHEDKRTSAVGTSDLKSIIFGLHMFDPNEIDDGKHRDMDLPEINAMADKVIAMR 287
             GD+++E + K T  + T DL+SIIFGLH FDP+E++  K  +++  E+ A+A KVIA+R
Sbjct: 519  VGDDVMEEDRKETGGIETGDLRSIIFGLHRFDPSEVNSEKSNELNASELKALAQKVIALR 578

Query: 286  DEQIVDKDDRKIEVNPRNYLKGYNVKEGGSASL-SCDIGLDEASYLSWVKKFEEVSKSSC 110
             +QI+DKDDRK EVNP    KG +   GG ++L S D GLDEASYLSWV+KF+E S+S+ 
Sbjct: 579  CDQILDKDDRKFEVNPIGQEKGLDFVSGGESALASYDPGLDEASYLSWVEKFKETSQSNE 638

Query: 109  DSIVDMRSRRNLDEEKSL 56
            + ++D+ +RRNL + K L
Sbjct: 639  NLVMDLGNRRNLPDNKYL 656


>ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Vitis
            vinifera]
          Length = 876

 Score =  237 bits (604), Expect = 2e-60
 Identities = 121/198 (61%), Positives = 152/198 (76%), Gaps = 1/198 (0%)
 Frame = -1

Query: 646  DTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLCINLVTEHTVEEVIMRRAERKLQLSLNV 467
            DTVIFYEQDWNPQVDKQALQRAHRIGQMNHVL INLVT  TVEE+IMRRAERKLQLS NV
Sbjct: 465  DTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTGRTVEEIIMRRAERKLQLSHNV 524

Query: 466  TGDNILEHEDKRTSAVGTSDLKSIIFGLHMFDPNEIDDGKHRDMDLPEINAMADKVIAMR 287
             G+  ++ E K  +     DL+S+IFGL M DP+EI++ +  + ++ E++AMADKV+A+R
Sbjct: 525  VGEVDIDREGKEMAGAEAGDLRSVIFGLRMIDPSEINNDESSEPNMSELDAMADKVVAIR 584

Query: 286  DEQIVDKDDRKIEVNPRNYLKGYN-VKEGGSASLSCDIGLDEASYLSWVKKFEEVSKSSC 110
             EQ + KDDRK EVNP + LKG++ + +  S S+  D GLDEASYL WV+KF+E S+SS 
Sbjct: 585  HEQQLGKDDRKFEVNPMDLLKGHDLIMDRSSVSVDFDPGLDEASYLVWVEKFKEASQSSD 644

Query: 109  DSIVDMRSRRNLDEEKSL 56
            D I+ + +RR L EEK L
Sbjct: 645  DPIIQVGNRRKLPEEKLL 662


>emb|CAN83037.1| hypothetical protein VITISV_034336 [Vitis vinifera]
          Length = 1054

 Score =  237 bits (604), Expect = 2e-60
 Identities = 121/198 (61%), Positives = 152/198 (76%), Gaps = 1/198 (0%)
 Frame = -1

Query: 646  DTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLCINLVTEHTVEEVIMRRAERKLQLSLNV 467
            DTVIFYEQDWNPQVDKQALQRAHRIGQMNHVL INLVT  TVEE+IMRRAERKLQLS NV
Sbjct: 545  DTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTGRTVEEIIMRRAERKLQLSHNV 604

Query: 466  TGDNILEHEDKRTSAVGTSDLKSIIFGLHMFDPNEIDDGKHRDMDLPEINAMADKVIAMR 287
             G+  ++ E K  +     DL+S+IFGL M DP+EI++ +  + ++ E++AMADKV+A+R
Sbjct: 605  VGEVDIDREGKEMAGAEAGDLRSVIFGLRMIDPSEINNDESSEPNMSELDAMADKVVAIR 664

Query: 286  DEQIVDKDDRKIEVNPRNYLKGYN-VKEGGSASLSCDIGLDEASYLSWVKKFEEVSKSSC 110
             EQ + KDDRK EVNP + LKG++ + +  S S+  D GLDEASYL WV+KF+E S+SS 
Sbjct: 665  HEQQLGKDDRKFEVNPMDLLKGHDLIMDRSSVSVDFDPGLDEASYLVWVEKFKEASQSSD 724

Query: 109  DSIVDMRSRRNLDEEKSL 56
            D I+ + +RR L EEK L
Sbjct: 725  DPIIQVGNRRKLPEEKLL 742


>ref|XP_002511628.1| helicase, putative [Ricinus communis] gi|223548808|gb|EEF50297.1|
            helicase, putative [Ricinus communis]
          Length = 860

 Score =  236 bits (601), Expect = 4e-60
 Identities = 121/198 (61%), Positives = 156/198 (78%), Gaps = 1/198 (0%)
 Frame = -1

Query: 646  DTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLCINLVTEHTVEEVIMRRAERKLQLSLNV 467
            DTVIFYEQDWNPQVDKQA+QRAHRIGQMNHVL INLVT HTVEEVIMRRAE+KLQLS NV
Sbjct: 454  DTVIFYEQDWNPQVDKQAVQRAHRIGQMNHVLSINLVTRHTVEEVIMRRAEKKLQLSNNV 513

Query: 466  TGDNILEHEDKRTSAVGTSDLKSIIFGLHMFDPNEIDDGKHRDMDLPEINAMADKVIAMR 287
             GD+++E + K    V T DL+SIIFGLH+FDP+EI   K  ++++PE+NAM  KVI +R
Sbjct: 514  LGDDVMEQKGKEPVGVETVDLRSIIFGLHIFDPSEIITEKPDELNMPELNAMIVKVIGIR 573

Query: 286  DEQIVDKDDRKIEVNPRNYLKGYNVKEGG-SASLSCDIGLDEASYLSWVKKFEEVSKSSC 110
            D+Q + KD  K +++  +  KG++V  GG SA ++ D GLDEASYLSWV++F+E S+SS 
Sbjct: 574  DDQGLAKDGGKYKLDQVDQKKGFDVVTGGNSAFINYDPGLDEASYLSWVERFKEASQSSG 633

Query: 109  DSIVDMRSRRNLDEEKSL 56
            + ++D+  RR+L E+K L
Sbjct: 634  NMVLDLGHRRSLPEDKHL 651


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