BLASTX nr result

ID: Glycyrrhiza23_contig00027157 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027157
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Gl...   186   1e-45
emb|CBI31012.3| unnamed protein product [Vitis vinifera]              147   1e-33
emb|CAN79309.1| hypothetical protein VITISV_020559 [Vitis vinifera]   143   1e-32
ref|XP_002331312.1| predicted protein [Populus trichocarpa] gi|2...   131   6e-29
emb|CAN66883.1| hypothetical protein VITISV_000960 [Vitis vinifera]   119   2e-25

>dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Glycine max]
          Length = 1321

 Score =  186 bits (473), Expect = 1e-45
 Identities = 91/110 (82%), Positives = 95/110 (86%)
 Frame = -2

Query: 332 FLVHFILNTLPPEYGPFKISYNTHKDKWSINELMTMCVQEEERLVMEMGDSALLTTACGK 153
           FLVHFILNTLP EYGPFKISYNTHKDKWSINELMTMCVQEEERLVMEMG+SALLTTA GK
Sbjct: 121 FLVHFILNTLPHEYGPFKISYNTHKDKWSINELMTMCVQEEERLVMEMGESALLTTAYGK 180

Query: 152 NKAVKSQANQKGSGRIPPQADIXXXXXXXXXXXKGHMKKNCPRFQKWLEK 3
           NKA+KSQA QKG+G+IPPQADI           KGHMKKNCP FQKWLEK
Sbjct: 181 NKAIKSQAYQKGNGKIPPQADIKKVAKCFFCKKKGHMKKNCPGFQKWLEK 230


>emb|CBI31012.3| unnamed protein product [Vitis vinifera]
          Length = 468

 Score =  147 bits (370), Expect = 1e-33
 Identities = 73/110 (66%), Positives = 83/110 (75%)
 Frame = -2

Query: 332 FLVHFILNTLPPEYGPFKISYNTHKDKWSINELMTMCVQEEERLVMEMGDSALLTTACGK 153
           FLVHFILNTLPP+YGPFKISYNTHKDKWSINELMTMCVQEE RL+ME G+S +L T   K
Sbjct: 197 FLVHFILNTLPPQYGPFKISYNTHKDKWSINELMTMCVQEEGRLMMEQGESVMLVTQ-RK 255

Query: 152 NKAVKSQANQKGSGRIPPQADIXXXXXXXXXXXKGHMKKNCPRFQKWLEK 3
            K  KSQA+QKG  +I P++DI           KGH+KK C +FQ WLEK
Sbjct: 256 GKKGKSQASQKGKQQISPKSDIKKDEKCFFCKKKGHVKKKCLKFQNWLEK 305


>emb|CAN79309.1| hypothetical protein VITISV_020559 [Vitis vinifera]
          Length = 1851

 Score =  143 bits (361), Expect = 1e-32
 Identities = 71/110 (64%), Positives = 84/110 (76%)
 Frame = -2

Query: 332 FLVHFILNTLPPEYGPFKISYNTHKDKWSINELMTMCVQEEERLVMEMGDSALLTTACGK 153
           FLVHFILNTLP +YGPFKISYNTH+DKWSINEL+TMCVQEE RL ME+G++AL+T   GK
Sbjct: 154 FLVHFILNTLPQQYGPFKISYNTHRDKWSINELLTMCVQEEGRLKMELGENALMTME-GK 212

Query: 152 NKAVKSQANQKGSGRIPPQADIXXXXXXXXXXXKGHMKKNCPRFQKWLEK 3
           +   ++QA +KG G+IPPQ  I           KGHMKK C +FQKWLEK
Sbjct: 213 D---QNQAKKKGKGKIPPQGGIKKVNKCFFYKKKGHMKKGCTKFQKWLEK 259


>ref|XP_002331312.1| predicted protein [Populus trichocarpa] gi|222873895|gb|EEF11026.1|
           predicted protein [Populus trichocarpa]
          Length = 183

 Score =  131 bits (329), Expect = 6e-29
 Identities = 67/104 (64%), Positives = 76/104 (73%)
 Frame = -2

Query: 332 FLVHFILNTLPPEYGPFKISYNTHKDKWSINELMTMCVQEEERLVMEMGDSALLTTACGK 153
           FLVH+ILNT P +YGPFKISYNTHK+ WSINELMTMCVQEE RLVME G+SA+L    G+
Sbjct: 84  FLVHYILNTFPHQYGPFKISYNTHKENWSINELMTMCVQEEGRLVMEQGESAMLAIR-GE 142

Query: 152 NKAVKSQANQKGSGRIPPQADIXXXXXXXXXXXKGHMKKNCPRF 21
               KSQANQKG G+IPPQA I           KGH+KK C +F
Sbjct: 143 G---KSQANQKGKGKIPPQAGIKKDSKCFFCKKKGHVKKKCAKF 183


>emb|CAN66883.1| hypothetical protein VITISV_000960 [Vitis vinifera]
          Length = 691

 Score =  119 bits (299), Expect = 2e-25
 Identities = 62/110 (56%), Positives = 73/110 (66%)
 Frame = -2

Query: 332 FLVHFILNTLPPEYGPFKISYNTHKDKWSINELMTMCVQEEERLVMEMGDSALLTTACGK 153
           F VHFILNTLP +YGPFKISYNTHKDKW INEL+TMCVQEE  L M++G+SAL+      
Sbjct: 110 FFVHFILNTLPQQYGPFKISYNTHKDKWLINELLTMCVQEEGMLKMKLGESALM----AM 165

Query: 152 NKAVKSQANQKGSGRIPPQADIXXXXXXXXXXXKGHMKKNCPRFQKWLEK 3
            +    QA +KG  +I  Q+ I           KGHMKK C +FQK LEK
Sbjct: 166 ERKDHYQAKKKGKSKILSQSGIKKTNRCFFCKKKGHMKKGCTKFQKCLEK 215


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