BLASTX nr result

ID: Glycyrrhiza23_contig00027154 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027154
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593181.1| hypothetical protein MTR_2g008650 [Medicago ...    79   3e-13
ref|XP_003600272.1| Replication protein A 70 kDa DNA-binding sub...    76   3e-12
ref|XP_003616287.1| Replication factor A protein [Medicago trunc...    76   3e-12
ref|XP_003605675.1| hypothetical protein MTR_4g036240 [Medicago ...    75   4e-12
ref|XP_003605305.1| Replication factor A protein [Medicago trunc...    75   4e-12

>ref|XP_003593181.1| hypothetical protein MTR_2g008650 [Medicago truncatula]
           gi|355482229|gb|AES63432.1| hypothetical protein
           MTR_2g008650 [Medicago truncatula]
          Length = 486

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 37/77 (48%), Positives = 51/77 (66%)
 Frame = -3

Query: 237 VIELEADSLKIKCALFGLYVDQLNAFVNSGNVQQPIVIIQFARVKTFREEVQLQNSMHST 58
           VIELEA   KI+C LFG YVD LN+F+ SG++   IVIIQ A+ K+F++++ +QN +  T
Sbjct: 98  VIELEAGGFKIQCTLFGSYVDDLNSFIASGDIPNAIVIIQLAKAKSFQDKIHVQNCIGCT 157

Query: 57  KIFFNPNIPEANEFRRR 7
           K+ F P    A   R R
Sbjct: 158 KVIFKPTCDAAVSMRNR 174


>ref|XP_003600272.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
           truncatula] gi|355489320|gb|AES70523.1| Replication
           protein A 70 kDa DNA-binding subunit [Medicago
           truncatula]
          Length = 701

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 33/77 (42%), Positives = 50/77 (64%)
 Frame = -3

Query: 237 VIELEADSLKIKCALFGLYVDQLNAFVNSGNVQQPIVIIQFARVKTFREEVQLQNSMHST 58
           VI +EAD  K++C LFG YVD+LN F+ +G     +V IQ A+VK F++ + +QN ++ T
Sbjct: 306 VIAMEADGYKLQCTLFGTYVDELNTFLATGETANVVVSIQLAKVKVFQDNIHIQNCLNCT 365

Query: 57  KIFFNPNIPEANEFRRR 7
           ++ FNP   E   F+ R
Sbjct: 366 RLKFNPVCAEGTAFKNR 382


>ref|XP_003616287.1| Replication factor A protein [Medicago truncatula]
           gi|355517622|gb|AES99245.1| Replication factor A protein
           [Medicago truncatula]
          Length = 517

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 34/78 (43%), Positives = 52/78 (66%)
 Frame = -3

Query: 243 MIVIELEADSLKIKCALFGLYVDQLNAFVNSGNVQQPIVIIQFARVKTFREEVQLQNSMH 64
           M++ E+   S K +CALFG YVD LN  +       PI+++QFA+VK FR++  LQN M+
Sbjct: 163 MVIFEITDASGKCECALFGQYVDTLNKLMGKSGGGMPIILVQFAKVKIFRDKASLQNVMN 222

Query: 63  STKIFFNPNIPEANEFRR 10
           +T+I  NP I +A++ R+
Sbjct: 223 TTRILINPPIEQADQIRK 240


>ref|XP_003605675.1| hypothetical protein MTR_4g036240 [Medicago truncatula]
           gi|355506730|gb|AES87872.1| hypothetical protein
           MTR_4g036240 [Medicago truncatula]
          Length = 480

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 33/77 (42%), Positives = 50/77 (64%)
 Frame = -3

Query: 237 VIELEADSLKIKCALFGLYVDQLNAFVNSGNVQQPIVIIQFARVKTFREEVQLQNSMHST 58
           VI +EAD  K++C LFG YVD+LN F+ +G     +V IQ A+VK F++ + +QN ++ T
Sbjct: 85  VIAMEADGYKLQCTLFGTYVDELNTFLATGETANVVVSIQLAKVKVFQDNIHIQNCLNCT 144

Query: 57  KIFFNPNIPEANEFRRR 7
           ++ FNP   E   F+ R
Sbjct: 145 RLKFNPVCVEGTAFKNR 161


>ref|XP_003605305.1| Replication factor A protein [Medicago truncatula]
           gi|355506360|gb|AES87502.1| Replication factor A protein
           [Medicago truncatula]
          Length = 283

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 36/78 (46%), Positives = 53/78 (67%)
 Frame = -3

Query: 243 MIVIELEADSLKIKCALFGLYVDQLNAFVNSGNVQQPIVIIQFARVKTFREEVQLQNSMH 64
           M VIEL+++  + KC LFG YV++L++F++SG  Q  +V I  A+VK F+ +  LQN+  
Sbjct: 144 MNVIELDSNGYRFKCTLFGEYVEELSSFLSSGESQNVVVAIMLAKVKLFQGKPALQNAFS 203

Query: 63  STKIFFNPNIPEANEFRR 10
           ST+I FNP I E  E R+
Sbjct: 204 STRITFNPEIGETKELRK 221


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