BLASTX nr result

ID: Glycyrrhiza23_contig00027132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027132
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK35761.1| unknown [Lotus japonicus]                               63   3e-08
ref|XP_003610820.1| hypothetical protein MTR_5g007390 [Medicago ...    56   3e-06
gb|AFK37936.1| unknown [Lotus japonicus]                               56   3e-06
ref|XP_003602588.1| hypothetical protein MTR_3g095970 [Medicago ...    55   8e-06
ref|XP_003595859.1| Manganese transport protein mntH [Medicago t...    55   8e-06

>gb|AFK35761.1| unknown [Lotus japonicus]
          Length = 69

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 23/66 (34%), Positives = 36/66 (54%)
 Frame = -3

Query: 223 CVVWFSTIWAIWLTRNDMTFNTVVFEVDSIMELIIRRSWQWFTARDNKFIEPFCNWYSDP 44
           C VW++ IW +W  RND+ F     ++   ME++  +SWQW  AR + F      WY D 
Sbjct: 3   CSVWWAVIWTVWNHRNDVIFRDEEVQMHKAMEMVKLKSWQWLNARKHNFSYSLYEWYCDS 62

Query: 43  MVCLSW 26
           + C+ +
Sbjct: 63  LSCIQF 68


>ref|XP_003610820.1| hypothetical protein MTR_5g007390 [Medicago truncatula]
           gi|355512155|gb|AES93778.1| hypothetical protein
           MTR_5g007390 [Medicago truncatula]
          Length = 123

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/63 (38%), Positives = 36/63 (57%)
 Frame = -3

Query: 220 VVWFSTIWAIWLTRNDMTFNTVVFEVDSIMELIIRRSWQWFTARDNKFIEPFCNWYSDPM 41
           ++W ++IWAIW TRN++ FN    EV  ++E I   SW+W  +R    +  F  W  DP 
Sbjct: 56  IIWHASIWAIWKTRNNIIFNNAGIEVQEVVEEIKMLSWKWNLSRLKIQVCLFYEWCWDPK 115

Query: 40  VCL 32
            C+
Sbjct: 116 WCM 118


>gb|AFK37936.1| unknown [Lotus japonicus]
          Length = 138

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 22/62 (35%), Positives = 33/62 (53%)
 Frame = -3

Query: 217 VWFSTIWAIWLTRNDMTFNTVVFEVDSIMELIIRRSWQWFTARDNKFIEPFCNWYSDPMV 38
           VW +T W++WL RN + F+    +   +++LI  RSW W  A+   F   F  W   P+ 
Sbjct: 74  VWMATCWSLWLMRNRVIFDNGELDTGLVLDLIQVRSWHWIKAKRVNFQNSFYEWKLSPLA 133

Query: 37  CL 32
           CL
Sbjct: 134 CL 135


>ref|XP_003602588.1| hypothetical protein MTR_3g095970 [Medicago truncatula]
           gi|355491636|gb|AES72839.1| hypothetical protein
           MTR_3g095970 [Medicago truncatula]
          Length = 152

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 21/67 (31%), Positives = 39/67 (58%)
 Frame = -3

Query: 232 SHWCVVWFSTIWAIWLTRNDMTFNTVVFEVDSIMELIIRRSWQWFTARDNKFIEPFCNWY 53
           S + V+WF+TIW IW  RN+  F     E+ +++E++ R S+ W  ++   F   + +W+
Sbjct: 42  SFFRVIWFATIWVIWKERNNRVFQNTGSELFNLIEIVKRYSFLWLRSKQVAFAYSYHDWW 101

Query: 52  SDPMVCL 32
             P+ C+
Sbjct: 102 KHPIHCM 108


>ref|XP_003595859.1| Manganese transport protein mntH [Medicago truncatula]
           gi|355484907|gb|AES66110.1| Manganese transport protein
           mntH [Medicago truncatula]
          Length = 663

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 21/44 (47%), Positives = 29/44 (65%)
 Frame = -3

Query: 220 VVWFSTIWAIWLTRNDMTFNTVVFEVDSIMELIIRRSWQWFTAR 89
           ++W +TIWA+W TRND  FN   FEVD I+E +   +W+W   R
Sbjct: 321 IIWLATIWALWKTRNDKVFNDANFEVDVIVEKVKVLAWKWAMCR 364


Top