BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027112
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas...    71   1e-10
ref|XP_003548282.1| PREDICTED: TMV resistance protein N-like [Gl...    67   3e-09
gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]               65   1e-08
sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H pr...    65   1e-08
emb|CAN61457.1| hypothetical protein VITISV_029796 [Vitis vinifera]    64   2e-08

>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase); Polynucleotidyl
            transferase, Ribonuclease H fold [Medicago truncatula]
          Length = 729

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 52/192 (27%), Positives = 80/192 (41%), Gaps = 4/192 (2%)
 Frame = -1

Query: 629  TNEERACFNSNIDTTCSRYLLESENFMHVLRDCKQVLSFWSQLVEPDKWSQFASRRFYSW 450
            TN  R+ +   I  TC     E E  +HVLRDC      W +L+  +  + F S     W
Sbjct: 490  TNYRRSKWGVGISPTCPCCAREDETVIHVLRDCVHSTQVWLRLIPHNYITNFFSFDCREW 549

Query: 449  LKWNLSSQDVGHLLIPWSTMVGVTLDALWRDTNSLIFNHKSEIDDNLLQQVIHQARFIYF 270
            +  NL+ + +G     W T    T   LW   N  IF    +   N    +    R I  
Sbjct: 550  VFNNLNKKGIGDNPATWQTTFMTTCWYLWNWRNKSIFEIGFQRPSNPTLVIQKFTREI-- 607

Query: 269  ESQKAIPMLGLPHKKEVDIAWTPPPRLAFKLNVDGSYIFALGSSACGGVI----GKFFQG 102
            E    +       K+ + I W  PP    KLN DG++  +   + CGG++    G++ +G
Sbjct: 608  EDNTKLVHKSSHQKETIYIGWMRPPFGWVKLNCDGAWKGSGTLAGCGGLLRDSDGRWIKG 667

Query: 101  FYCNVGNYSAIH 66
            ++  +G   A H
Sbjct: 668  YFKKIGMCDAFH 679


>ref|XP_003548282.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1420

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 10/192 (5%)
 Frame = -1

Query: 629  TNEERACFNSNIDTTCSRYLLESENFMHVLRDCKQVLSFWSQLVEPDKWSQFASRRFYSW 450
            TN  R   ++++D++C R     E  +H LRDC +V +FW  ++      +F +     W
Sbjct: 1098 TNPLRRYRHTSMDSSCPRCPELEETCLHALRDCPKVAAFWRSVLPKKLAPKFFNGDVAVW 1157

Query: 449  LKWNLSSQDVGHLLIPWSTMVGVTLDALWRDTNSLIFNHKSEIDDNLLQQVIHQARFIYF 270
            L+ NLS  +       W T  G+ ++ LW   N L+F      D   L  +       Y 
Sbjct: 1158 LETNLSFSEAAFF---WPTFFGIAVELLWESRNDLVFYKDGTWDYLDLSDITDIVFNRYK 1214

Query: 269  ESQKA-IPMLGLPHKKEVDIAWTPPPRLA-----FKLNVDGSYIFALGSSACGGVI---- 120
            +  +A    + +P      + W  P  L+      +LNV G+Y  +  ++ACGG+     
Sbjct: 1215 DCMRAHASHILMPRNL---LKWRRPLPLSHGHWLLRLNVSGAYDRSSDTAACGGIFRDNN 1271

Query: 119  GKFFQGFYCNVG 84
             +F  GF   +G
Sbjct: 1272 DRFVLGFSVKLG 1283


>gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]
          Length = 1055

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 52/191 (27%), Positives = 84/191 (43%), Gaps = 5/191 (2%)
 Frame = -1

Query: 629 TNEERACFNSNIDTTCSRYLLESENFMHVLRDCKQVLSFWSQLVEPDKWSQFASRRFYSW 450
           T EER   + +    C       E+ +HVLRDC   L  W ++V   +   F S+  + W
Sbjct: 423 TEEERHRRHLSASNVCQVCKGGVESMLHVLRDCPAQLGIWVRVVPQRRQQGFFSKSLFEW 482

Query: 449 LKWNLSSQDVGHLLIPWSTMVGVTLDALWRDTNSLIFNHKSEIDDNLLQQVIHQARFIYF 270
           L  NL  +  G   IPWST+  V +   W+     IF   ++  D +  + + +     +
Sbjct: 483 LYDNLGDRS-GCEDIPWSTIFAVIIWWGWKWRCGNIFGENTKCRDRV--KFVKEWAVEVY 539

Query: 269 ESQKAIPMLGLPHKK-EVDIAWTPPPRLAFKLNVDGSYIFALGSSACGGVI----GKFFQ 105
            +     ++G+   + E  I W  P     K+N DG+     G ++ GGV+    G +  
Sbjct: 540 RAHSGNVLVGITQPRVERMIGWVSPCVGWVKVNTDGASRGNPGLASAGGVLRDCTGAWCG 599

Query: 104 GFYCNVGNYSA 72
           GF  N+G  SA
Sbjct: 600 GFSLNIGRCSA 610


>sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H protein At1g65750
          Length = 620

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 52/191 (27%), Positives = 84/191 (43%), Gaps = 5/191 (2%)
 Frame = -1

Query: 629 TNEERACFNSNIDTTCSRYLLESENFMHVLRDCKQVLSFWSQLVEPDKWSQFASRRFYSW 450
           T EER   + +    C       E+ +HVLRDC   L  W ++V   +   F S+  + W
Sbjct: 314 TEEERHRRHLSASNVCQVCKGGVESMLHVLRDCPAQLGIWVRVVPQRRQQGFFSKSLFEW 373

Query: 449 LKWNLSSQDVGHLLIPWSTMVGVTLDALWRDTNSLIFNHKSEIDDNLLQQVIHQARFIYF 270
           L  NL  +  G   IPWST+  V +   W+     IF   ++  D +  + + +     +
Sbjct: 374 LYDNLGDRS-GCEDIPWSTIFAVIIWWGWKWRCGNIFGENTKCRDRV--KFVKEWAVEVY 430

Query: 269 ESQKAIPMLGLPHKK-EVDIAWTPPPRLAFKLNVDGSYIFALGSSACGGVI----GKFFQ 105
            +     ++G+   + E  I W  P     K+N DG+     G ++ GGV+    G +  
Sbjct: 431 RAHSGNVLVGITQPRVERMIGWVSPCVGWVKVNTDGASRGNPGLASAGGVLRDCTGAWCG 490

Query: 104 GFYCNVGNYSA 72
           GF  N+G  SA
Sbjct: 491 GFSLNIGRCSA 501


>emb|CAN61457.1| hypothetical protein VITISV_029796 [Vitis vinifera]
          Length = 358

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 33/116 (28%), Positives = 57/116 (49%)
 Frame = -1

Query: 629 TNEERACFNSNIDTTCSRYLLESENFMHVLRDCKQVLSFWSQLVEPDKWSQFASRRFYSW 450
           TN  R       D+ C       E+ +HVLRDC   ++FW  L+  +KW++F S     W
Sbjct: 2   TNGNRVKRGLASDSRCGGCNGSLEDAVHVLRDCPHAMAFWQVLLPGNKWNEFFSGECREW 61

Query: 449 LKWNLSSQDVGHLLIPWSTMVGVTLDALWRDTNSLIFNHKSEIDDNLLQQVIHQAR 282
           L  N+  +++  + + W+ +  +    LWR  N  +F    ++  N +  V++QAR
Sbjct: 62  LTKNVMRREIEGIPLQWNVLFALGCWWLWRWRNQRVFEPGKQLPFNKVAFVVNQAR 117