BLASTX nr result
ID: Glycyrrhiza23_contig00027106
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00027106
(938 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containi... 511 e-143
ref|XP_003629914.1| Pentatricopeptide repeat-containing protein ... 486 e-135
ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containi... 442 e-122
emb|CBI30808.3| unnamed protein product [Vitis vinifera] 442 e-122
ref|XP_002331875.1| predicted protein [Populus trichocarpa] gi|2... 421 e-115
>ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Glycine max]
Length = 721
Score = 511 bits (1316), Expect = e-143
Identities = 251/312 (80%), Positives = 278/312 (89%)
Frame = -1
Query: 938 LLTGYGLNDRHEEALGVFGDMVRVGVFPNESSFTSALNSCCGLEDLERGRVIHAAAIKML 759
LLTGYGLND+H EAL VFG+M+R+ V PNESSFTSALNSCCGLED+ERG+VIHAAA+KM
Sbjct: 320 LLTGYGLNDKHREALEVFGEMMRIDVVPNESSFTSALNSCCGLEDIERGKVIHAAAVKM- 378
Query: 758 LGLEYGAYVGSSLVAMYSKCGYIGDAVSVFKGIGEKSVVSWNSVIVGCAQHGCAMWGLAL 579
GLE G YVG SLV MYSKCGY+ DAV VFKGI EK+VVSWNSVIVGCAQHGC MW LAL
Sbjct: 379 -GLESGGYVGGSLVVMYSKCGYVSDAVYVFKGINEKNVVSWNSVIVGCAQHGCGMWALAL 437
Query: 578 FNRMLRDGVDPDEITLIGLLSACSHSGMLQKARCFFRYFGRERSVVTLTKEHYACMVDVL 399
FN+MLR+GVDPD IT+ GLLSACSHSGMLQKARCFFRYFG++RSV TLT EHY MVDVL
Sbjct: 438 FNQMLREGVDPDGITVTGLLSACSHSGMLQKARCFFRYFGQKRSV-TLTIEHYTSMVDVL 496
Query: 398 GRCGELEEAEALVRSMPVKAESIVWLALLSACRMHSNLDVAERAAKQILEMEPHCGAAYV 219
GRCGELEEAEA+V SMP+KA S+VWLALLSACR HSNLD+A+RAA QI E+EP C AAYV
Sbjct: 497 GRCGELEEAEAVVMSMPMKANSMVWLALLSACRKHSNLDLAKRAANQIFEIEPDCSAAYV 556
Query: 218 LLSNLYASSSRWSEVARIRRTMKQNGVVKQPGSSWVTLKGLRHEFLSADRSHPLTEEIYH 39
LLSNLYASSSRW+EVA IRR MK NGVVK+PGSSW+TLKG +H+FLSADRSHPL E+IY
Sbjct: 557 LLSNLYASSSRWAEVALIRRKMKHNGVVKKPGSSWLTLKGQKHKFLSADRSHPLAEKIYQ 616
Query: 38 KLEWLGVRLKEL 3
KLEWLGV+LKEL
Sbjct: 617 KLEWLGVKLKEL 628
Score = 63.2 bits (152), Expect = 9e-08
Identities = 51/219 (23%), Positives = 95/219 (43%), Gaps = 4/219 (1%)
Frame = -1
Query: 938 LLTGYGLNDRHEEALGVFGDMVRVGVFPNESSFTSALNSCCGLEDLERGRVIHAAAIKML 759
++ G N + E+AL +F DMV GV + L++ + G IH + K L
Sbjct: 218 MIAGLDHNGKSEQALVLFRDMVASGVCLSSGVLVCGLSAAAKIPAWRVGIQIHCSVFK-L 276
Query: 758 LGLEYGAYVGSSLVAMYSKCGYIGDAVSVFKGIGEKSVVSWNSVIVGCAQHGCAMWGLAL 579
+ +V +SLV Y+ C + A VF + KSVV W +++ G + L +
Sbjct: 277 GDWHFDEFVSASLVTFYAGCKQMEAACRVFGEVVYKSVVIWTALLTGYGLNDKHREALEV 336
Query: 578 FNRMLRDGVDPDEITLIGLLSACSHSGMLQKARCFFRYFGRERSVVTLTKEH----YACM 411
F M+R V P+E + L++C +++ + + V + E +
Sbjct: 337 FGEMMRIDVVPNESSFTSALNSCCGLEDIERGKVI------HAAAVKMGLESGGYVGGSL 390
Query: 410 VDVLGRCGELEEAEALVRSMPVKAESIVWLALLSACRMH 294
V + +CG + +A + + + K + W +++ C H
Sbjct: 391 VVMYSKCGYVSDAVYVFKGINEK-NVVSWNSVIVGCAQH 428
>ref|XP_003629914.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523936|gb|AET04390.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 727
Score = 486 bits (1252), Expect = e-135
Identities = 243/312 (77%), Positives = 266/312 (85%)
Frame = -1
Query: 938 LLTGYGLNDRHEEALGVFGDMVRVGVFPNESSFTSALNSCCGLEDLERGRVIHAAAIKML 759
LLTG GLND+H EAL VF +M+R V PNESSFTSALNSC GLEDLE+GRVIHAA IKM
Sbjct: 326 LLTGCGLNDKHVEALEVFSEMMRFNVVPNESSFTSALNSCVGLEDLEKGRVIHAAGIKM- 384
Query: 758 LGLEYGAYVGSSLVAMYSKCGYIGDAVSVFKGIGEKSVVSWNSVIVGCAQHGCAMWGLAL 579
GLE Y G+SLV MYSKCG+IGDA+ VFKGI EK+VVSWNSVIVGCAQHGC W L L
Sbjct: 385 -GLENAVYTGNSLVVMYSKCGFIGDALCVFKGICEKNVVSWNSVIVGCAQHGCGTWALVL 443
Query: 578 FNRMLRDGVDPDEITLIGLLSACSHSGMLQKARCFFRYFGRERSVVTLTKEHYACMVDVL 399
F MLR+GV+ DEITL GLLSACS SGMLQKARCFF YF R+RS+ LT EHYACMVDVL
Sbjct: 444 FKEMLREGVESDEITLTGLLSACSRSGMLQKARCFFGYFARKRSM-KLTVEHYACMVDVL 502
Query: 398 GRCGELEEAEALVRSMPVKAESIVWLALLSACRMHSNLDVAERAAKQILEMEPHCGAAYV 219
GRCGE+EEAEAL SMPV+A S+VWL LLSACR+HS+LDVAERAAK+I EMEP C AAYV
Sbjct: 503 GRCGEVEEAEALATSMPVEANSMVWLVLLSACRVHSSLDVAERAAKRIFEMEPDCSAAYV 562
Query: 218 LLSNLYASSSRWSEVARIRRTMKQNGVVKQPGSSWVTLKGLRHEFLSADRSHPLTEEIYH 39
LLSNLYASS RW EVARIR MK NG+VKQPGSSW+TLKG+RHEFLSADRSHPLTEEIY
Sbjct: 563 LLSNLYASSRRWLEVARIRMKMKHNGIVKQPGSSWITLKGMRHEFLSADRSHPLTEEIYE 622
Query: 38 KLEWLGVRLKEL 3
KL WLGV+L+EL
Sbjct: 623 KLVWLGVKLREL 634
Score = 72.8 bits (177), Expect = 1e-10
Identities = 56/219 (25%), Positives = 98/219 (44%), Gaps = 4/219 (1%)
Frame = -1
Query: 938 LLTGYGLNDRHEEALGVFGDMVRV-GVFPNESSFTSALNSCCGLEDLERGRVIHAAAIKM 762
++ G N + +AL F +MV GV + ++ L++ + D G IH K
Sbjct: 222 IIVGLDRNGKSYQALFFFKNMVGFSGVGISSTTLVCGLSAAAKILDFYAGIQIHCCMFKF 281
Query: 761 LLGLEYGAYVGSSLVAMYSKCGYIGDAVSVFKGIGEKSVVSWNSVIVGCAQHGCAMWGLA 582
+V +SLV Y+ C +GDA VF K+VV W +++ GC + + L
Sbjct: 282 GFCCGLDEFVSASLVTFYASCKRMGDACKVFGETVCKNVVVWTALLTGCGLNDKHVEALE 341
Query: 581 LFNRMLRDGVDPDEITLIGLLSACSHSGMLQKARCFFR---YFGRERSVVTLTKEHYACM 411
+F+ M+R V P+E + L++C L+K R G E +V T +
Sbjct: 342 VFSEMMRFNVVPNESSFTSALNSCVGLEDLEKGRVIHAAGIKMGLENAVYTGNS-----L 396
Query: 410 VDVLGRCGELEEAEALVRSMPVKAESIVWLALLSACRMH 294
V + +CG + +A + + + K + W +++ C H
Sbjct: 397 VVMYSKCGFIGDALCVFKGICEK-NVVSWNSVIVGCAQH 434
>ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial [Vitis vinifera]
Length = 676
Score = 442 bits (1138), Expect = e-122
Identities = 211/312 (67%), Positives = 255/312 (81%)
Frame = -1
Query: 938 LLTGYGLNDRHEEALGVFGDMVRVGVFPNESSFTSALNSCCGLEDLERGRVIHAAAIKML 759
L+TGYGLN +HE+AL VFG+M+R GV PN+SSFTSALNSCCGLE L+ GR IH AA+K
Sbjct: 275 LVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVK-- 332
Query: 758 LGLEYGAYVGSSLVAMYSKCGYIGDAVSVFKGIGEKSVVSWNSVIVGCAQHGCAMWGLAL 579
LGLE +VG+SL+ MY +CG + D V +FK I +K++VSWNSVIVGCAQHGC MW LA
Sbjct: 333 LGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAF 392
Query: 578 FNRMLRDGVDPDEITLIGLLSACSHSGMLQKARCFFRYFGRERSVVTLTKEHYACMVDVL 399
FN+M+R V+PDEIT GLLSACSHSGM QK RC F+YF +S + +HYACMVD+L
Sbjct: 393 FNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSA-EVKLDHYACMVDIL 451
Query: 398 GRCGELEEAEALVRSMPVKAESIVWLALLSACRMHSNLDVAERAAKQILEMEPHCGAAYV 219
GR G+LEEAE L+R+MPVKA S+VWL LLSAC MHS L+VAERAAK I+++EPHC +AYV
Sbjct: 452 GRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYV 511
Query: 218 LLSNLYASSSRWSEVARIRRTMKQNGVVKQPGSSWVTLKGLRHEFLSADRSHPLTEEIYH 39
LLSNLYAS+SRWS+V+RIRR MKQ G+ KQPG SW+T+KG R+EFLS DRSHP ++ IY
Sbjct: 512 LLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQ 571
Query: 38 KLEWLGVRLKEL 3
KLEWLG +LKEL
Sbjct: 572 KLEWLGGKLKEL 583
Score = 82.0 bits (201), Expect = 2e-13
Identities = 59/223 (26%), Positives = 104/223 (46%), Gaps = 8/223 (3%)
Frame = -1
Query: 938 LLTGYGLNDRHEEALGVFGDMVRVGVF--PNESSFTSALNSCCGLEDLERGRVIHAAAIK 765
++ G + R EEALG+F M+ GV P S++ + +C L +G IHA K
Sbjct: 172 MIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFK 231
Query: 764 MLLGLEYGAYVGSSLVAMYSKCGYIGDAVSVFKGIGEKSVVSWNSVIVGCAQHGCAMWGL 585
LG + AY+ ++L+ Y+ C + D++ VF G +VV W +++ G + L
Sbjct: 232 --LGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDAL 289
Query: 584 ALFNRMLRDGVDPDEITLIGLLSACSHSGMLQKARCFFRYFGRE--RSVVTLTKEHYA-- 417
+F M+R+GV P++ + L++C L +GRE + V L E
Sbjct: 290 KVFGEMMREGVLPNQSSFTSALNSCCGLEALD--------WGREIHTAAVKLGLETDVFV 341
Query: 416 --CMVDVLGRCGELEEAEALVRSMPVKAESIVWLALLSACRMH 294
++ + RCG L + + + + K + W +++ C H
Sbjct: 342 GNSLIVMYYRCGNLNDGVVIFKRIS-KKNIVSWNSVIVGCAQH 383
>emb|CBI30808.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 442 bits (1138), Expect = e-122
Identities = 211/312 (67%), Positives = 255/312 (81%)
Frame = -1
Query: 938 LLTGYGLNDRHEEALGVFGDMVRVGVFPNESSFTSALNSCCGLEDLERGRVIHAAAIKML 759
L+TGYGLN +HE+AL VFG+M+R GV PN+SSFTSALNSCCGLE L+ GR IH AA+K
Sbjct: 259 LVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVK-- 316
Query: 758 LGLEYGAYVGSSLVAMYSKCGYIGDAVSVFKGIGEKSVVSWNSVIVGCAQHGCAMWGLAL 579
LGLE +VG+SL+ MY +CG + D V +FK I +K++VSWNSVIVGCAQHGC MW LA
Sbjct: 317 LGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAF 376
Query: 578 FNRMLRDGVDPDEITLIGLLSACSHSGMLQKARCFFRYFGRERSVVTLTKEHYACMVDVL 399
FN+M+R V+PDEIT GLLSACSHSGM QK RC F+YF +S + +HYACMVD+L
Sbjct: 377 FNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSA-EVKLDHYACMVDIL 435
Query: 398 GRCGELEEAEALVRSMPVKAESIVWLALLSACRMHSNLDVAERAAKQILEMEPHCGAAYV 219
GR G+LEEAE L+R+MPVKA S+VWL LLSAC MHS L+VAERAAK I+++EPHC +AYV
Sbjct: 436 GRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYV 495
Query: 218 LLSNLYASSSRWSEVARIRRTMKQNGVVKQPGSSWVTLKGLRHEFLSADRSHPLTEEIYH 39
LLSNLYAS+SRWS+V+RIRR MKQ G+ KQPG SW+T+KG R+EFLS DRSHP ++ IY
Sbjct: 496 LLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQ 555
Query: 38 KLEWLGVRLKEL 3
KLEWLG +LKEL
Sbjct: 556 KLEWLGGKLKEL 567
Score = 82.0 bits (201), Expect = 2e-13
Identities = 59/223 (26%), Positives = 104/223 (46%), Gaps = 8/223 (3%)
Frame = -1
Query: 938 LLTGYGLNDRHEEALGVFGDMVRVGVF--PNESSFTSALNSCCGLEDLERGRVIHAAAIK 765
++ G + R EEALG+F M+ GV P S++ + +C L +G IHA K
Sbjct: 156 MIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFK 215
Query: 764 MLLGLEYGAYVGSSLVAMYSKCGYIGDAVSVFKGIGEKSVVSWNSVIVGCAQHGCAMWGL 585
LG + AY+ ++L+ Y+ C + D++ VF G +VV W +++ G + L
Sbjct: 216 --LGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDAL 273
Query: 584 ALFNRMLRDGVDPDEITLIGLLSACSHSGMLQKARCFFRYFGRE--RSVVTLTKEHYA-- 417
+F M+R+GV P++ + L++C L +GRE + V L E
Sbjct: 274 KVFGEMMREGVLPNQSSFTSALNSCCGLEALD--------WGREIHTAAVKLGLETDVFV 325
Query: 416 --CMVDVLGRCGELEEAEALVRSMPVKAESIVWLALLSACRMH 294
++ + RCG L + + + + K + W +++ C H
Sbjct: 326 GNSLIVMYYRCGNLNDGVVIFKRIS-KKNIVSWNSVIVGCAQH 367
>ref|XP_002331875.1| predicted protein [Populus trichocarpa] gi|222875393|gb|EEF12524.1|
predicted protein [Populus trichocarpa]
Length = 675
Score = 421 bits (1082), Expect = e-115
Identities = 200/311 (64%), Positives = 251/311 (80%)
Frame = -1
Query: 938 LLTGYGLNDRHEEALGVFGDMVRVGVFPNESSFTSALNSCCGLEDLERGRVIHAAAIKML 759
LLT Y N++H++AL VFGDM ++G PN+S+F+ L +CCGLE L++G+ IH AIK
Sbjct: 274 LLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIHTMAIK-- 331
Query: 758 LGLEYGAYVGSSLVAMYSKCGYIGDAVSVFKGIGEKSVVSWNSVIVGCAQHGCAMWGLAL 579
LGLE +VG+SLV MY++CG + AV+VF+ I EK +VSWNS+IVG AQHG +W L
Sbjct: 332 LGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIF 391
Query: 578 FNRMLRDGVDPDEITLIGLLSACSHSGMLQKARCFFRYFGRERSVVTLTKEHYACMVDVL 399
FN+M+R GVDP+EIT GLLSACS SGML K RCFF Y R +S V L +HYACMVD+L
Sbjct: 392 FNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISRYKSNV-LRPQHYACMVDIL 450
Query: 398 GRCGELEEAEALVRSMPVKAESIVWLALLSACRMHSNLDVAERAAKQILEMEPHCGAAYV 219
GRCG+L+EAE LVR MPVKA S++WLALLSACR+HSNL+VAERAAK IL++EP+C +AYV
Sbjct: 451 GRCGKLDEAEELVRYMPVKANSMIWLALLSACRVHSNLEVAERAAKHILDLEPNCSSAYV 510
Query: 218 LLSNLYASSSRWSEVARIRRTMKQNGVVKQPGSSWVTLKGLRHEFLSADRSHPLTEEIYH 39
LLSN+YAS+ RW++V+R+R MKQ G+VKQPGSSWV L+G +HEFLSADRSHPL+E IY
Sbjct: 511 LLSNIYASAGRWADVSRMRVKMKQGGLVKQPGSSWVVLRGKKHEFLSADRSHPLSERIYE 570
Query: 38 KLEWLGVRLKE 6
KL+WLG +LKE
Sbjct: 571 KLDWLGKKLKE 581