BLASTX nr result

ID: Glycyrrhiza23_contig00027100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027100
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538717.1| PREDICTED: YTH domain-containing protein 1-l...    93   3e-17
ref|XP_003517446.1| PREDICTED: YTH domain-containing protein 1-l...    92   6e-17
ref|XP_002275532.2| PREDICTED: uncharacterized protein LOC100254...    61   1e-07
emb|CBI34780.3| unnamed protein product [Vitis vinifera]               61   1e-07
ref|XP_002298082.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06

>ref|XP_003538717.1| PREDICTED: YTH domain-containing protein 1-like [Glycine max]
          Length = 368

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 43/56 (76%), Positives = 47/56 (83%)
 Frame = -3

Query: 168 ESSSYKFNEDINPTRADKVGHSHCQIGHPTGTGVKKLYNTKYFIIKSLNHHNICLS 1
           ESS YKF E+INPTRADK GHSH QIGHP G GV+K +NTKYF+IKSLNH NI LS
Sbjct: 31  ESSGYKFKENINPTRADKGGHSHGQIGHPAGIGVEKCHNTKYFVIKSLNHQNIHLS 86


>ref|XP_003517446.1| PREDICTED: YTH domain-containing protein 1-like [Glycine max]
          Length = 396

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 44/56 (78%), Positives = 47/56 (83%)
 Frame = -3

Query: 168 ESSSYKFNEDINPTRADKVGHSHCQIGHPTGTGVKKLYNTKYFIIKSLNHHNICLS 1
           ESS YKFNE+IN TRADK GHSH QIGHPTG GV+K +N KYFIIKSLNH NI LS
Sbjct: 31  ESSGYKFNENINTTRADKGGHSHGQIGHPTGIGVEKWHNIKYFIIKSLNHQNIHLS 86


>ref|XP_002275532.2| PREDICTED: uncharacterized protein LOC100254803 [Vitis vinifera]
          Length = 404

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/56 (55%), Positives = 39/56 (69%)
 Frame = -3

Query: 168 ESSSYKFNEDINPTRADKVGHSHCQIGHPTGTGVKKLYNTKYFIIKSLNHHNICLS 1
           ESSSYK NED  P+  ++  HSH  + + +     KLY+T+YFIIKSLNHHNI LS
Sbjct: 31  ESSSYKANEDGYPSGPEEQRHSHTGMLNSSANKKGKLYSTRYFIIKSLNHHNIQLS 86


>emb|CBI34780.3| unnamed protein product [Vitis vinifera]
          Length = 306

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/56 (55%), Positives = 39/56 (69%)
 Frame = -3

Query: 168 ESSSYKFNEDINPTRADKVGHSHCQIGHPTGTGVKKLYNTKYFIIKSLNHHNICLS 1
           ESSSYK NED  P+  ++  HSH  + + +     KLY+T+YFIIKSLNHHNI LS
Sbjct: 31  ESSSYKANEDGYPSGPEEQRHSHTGMLNSSANKKGKLYSTRYFIIKSLNHHNIQLS 86


>ref|XP_002298082.1| predicted protein [Populus trichocarpa] gi|222845340|gb|EEE82887.1|
           predicted protein [Populus trichocarpa]
          Length = 398

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/56 (55%), Positives = 38/56 (67%)
 Frame = -3

Query: 168 ESSSYKFNEDINPTRADKVGHSHCQIGHPTGTGVKKLYNTKYFIIKSLNHHNICLS 1
           ES SYK NED  P  A+K GH   ++G+ +    +KL NT+YFIIKSLN HNI LS
Sbjct: 31  ESPSYKGNEDGYPIMAEKAGHD--RVGNSSINKKRKLCNTRYFIIKSLNQHNIQLS 84


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