BLASTX nr result

ID: Glycyrrhiza23_contig00027080 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027080
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550201.1| PREDICTED: trafficking protein particle comp...   152   3e-35
ref|XP_002871450.1| hypothetical protein ARALYDRAFT_487936 [Arab...   135   3e-30
ref|NP_196665.1| protein TRS120 [Arabidopsis thaliana] gi|979515...   135   3e-30
ref|XP_002515463.1| conserved hypothetical protein [Ricinus comm...   133   1e-29
ref|XP_004145518.1| PREDICTED: uncharacterized protein LOC101217...   131   5e-29

>ref|XP_003550201.1| PREDICTED: trafficking protein particle complex subunit 9-like
           [Glycine max]
          Length = 1198

 Score =  152 bits (384), Expect = 3e-35
 Identities = 71/76 (93%), Positives = 74/76 (97%)
 Frame = +3

Query: 3   VLPIGTVPANLLRDYYSMLLPLHTIPLSAISSFYTEHQKSPFAHQPWDSGSLRFKFVLGG 182
           V+PIG VPAN+LRDYYSMLLPLHTIPLSAISSFYTEHQKSPFA QPWDSGSLRFKFVLGG
Sbjct: 17  VVPIGAVPANVLRDYYSMLLPLHTIPLSAISSFYTEHQKSPFAVQPWDSGSLRFKFVLGG 76

Query: 183 APPSPWEDFQSYRKTL 230
           APPSPWEDFQS+RKTL
Sbjct: 77  APPSPWEDFQSHRKTL 92


>ref|XP_002871450.1| hypothetical protein ARALYDRAFT_487936 [Arabidopsis lyrata subsp.
           lyrata] gi|297317287|gb|EFH47709.1| hypothetical protein
           ARALYDRAFT_487936 [Arabidopsis lyrata subsp. lyrata]
          Length = 1186

 Score =  135 bits (341), Expect = 3e-30
 Identities = 64/76 (84%), Positives = 68/76 (89%)
 Frame = +3

Query: 3   VLPIGTVPANLLRDYYSMLLPLHTIPLSAISSFYTEHQKSPFAHQPWDSGSLRFKFVLGG 182
           VLPIGT+P  LLRDY+SMLL  HTI LSAISSFYTEHQKSPF +QPWDSGSLRFKFVLGG
Sbjct: 17  VLPIGTIPPTLLRDYHSMLLRHHTIALSAISSFYTEHQKSPFTNQPWDSGSLRFKFVLGG 76

Query: 183 APPSPWEDFQSYRKTL 230
           +PPSPWEDFQS RK L
Sbjct: 77  SPPSPWEDFQSNRKML 92


>ref|NP_196665.1| protein TRS120 [Arabidopsis thaliana] gi|9795156|emb|CAC03452.1|
           putative protein [Arabidopsis thaliana]
           gi|332004245|gb|AED91628.1| protein TRS120 [Arabidopsis
           thaliana]
          Length = 1186

 Score =  135 bits (341), Expect = 3e-30
 Identities = 64/76 (84%), Positives = 68/76 (89%)
 Frame = +3

Query: 3   VLPIGTVPANLLRDYYSMLLPLHTIPLSAISSFYTEHQKSPFAHQPWDSGSLRFKFVLGG 182
           VLPIGT+P  LLRDY+SMLL  HTI LSAISSFYTEHQKSPF +QPWDSGSLRFKFVLGG
Sbjct: 17  VLPIGTIPPTLLRDYHSMLLRHHTIALSAISSFYTEHQKSPFTNQPWDSGSLRFKFVLGG 76

Query: 183 APPSPWEDFQSYRKTL 230
           +PPSPWEDFQS RK L
Sbjct: 77  SPPSPWEDFQSNRKML 92


>ref|XP_002515463.1| conserved hypothetical protein [Ricinus communis]
           gi|223545407|gb|EEF46912.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1195

 Score =  133 bits (335), Expect = 1e-29
 Identities = 61/76 (80%), Positives = 67/76 (88%)
 Frame = +3

Query: 3   VLPIGTVPANLLRDYYSMLLPLHTIPLSAISSFYTEHQKSPFAHQPWDSGSLRFKFVLGG 182
           ++PIG VPA +LRDYYSM    H IPLSAISSFYTEHQKSPFA+QPWD+GSLRFKFVLGG
Sbjct: 17  IIPIGAVPAKILRDYYSMFEGQHRIPLSAISSFYTEHQKSPFANQPWDTGSLRFKFVLGG 76

Query: 183 APPSPWEDFQSYRKTL 230
           +PPSPWEDFQS RK L
Sbjct: 77  SPPSPWEDFQSNRKIL 92


>ref|XP_004145518.1| PREDICTED: uncharacterized protein LOC101217047 [Cucumis sativus]
           gi|449485175|ref|XP_004157090.1| PREDICTED:
           uncharacterized LOC101217047 [Cucumis sativus]
          Length = 1196

 Score =  131 bits (330), Expect = 5e-29
 Identities = 62/76 (81%), Positives = 66/76 (86%)
 Frame = +3

Query: 3   VLPIGTVPANLLRDYYSMLLPLHTIPLSAISSFYTEHQKSPFAHQPWDSGSLRFKFVLGG 182
           VLPIG+VP  LLRDY SMLL    IPLSAISSFYTEHQKSPF+HQPWDSGSLRFKF+LGG
Sbjct: 17  VLPIGSVPPTLLRDYLSMLLRHQLIPLSAISSFYTEHQKSPFSHQPWDSGSLRFKFILGG 76

Query: 183 APPSPWEDFQSYRKTL 230
            PP+PWEDFQS RK L
Sbjct: 77  DPPNPWEDFQSNRKIL 92


Top