BLASTX nr result
ID: Glycyrrhiza23_contig00027060
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00027060 (318 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003532384.1| PREDICTED: pentatricopeptide repeat-containi... 101 7e-20 ref|XP_002281032.2| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 74 1e-11 ref|XP_002318186.1| predicted protein [Populus trichocarpa] gi|2... 65 4e-09 dbj|BAJ53111.1| JHL07K02.1 [Jatropha curcas] 60 2e-07 >ref|XP_003532384.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61800-like [Glycine max] Length = 577 Score = 101 bits (251), Expect = 7e-20 Identities = 60/106 (56%), Positives = 68/106 (64%) Frame = +1 Query: 1 HTLPILNNILSTFTSLLLPXXXXXXXXXXXXXXXXALSLFHSIPNPTPFSYNTLIRIHTL 180 HT PILNNILST +SLL ALSLFHSIPNP+ FS+NTLIRIHTL Sbjct: 32 HTFPILNNILSTLSSLLTTSSNSNSIITFY-----ALSLFHSIPNPSTFSFNTLIRIHTL 86 Query: 181 LSSPLPAINXXXXXXXXXXXXXXHTFPFVLKASSQLNNALSLIQSL 318 L SPLPA++ HTFPFVLKAS+QL ++LSL QSL Sbjct: 87 LLSPLPALHLFSTLRRLSLPPDFHTFPFVLKASAQL-HSLSLAQSL 131 >ref|XP_002281032.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g61800 [Vitis vinifera] Length = 576 Score = 74.3 bits (181), Expect = 1e-11 Identities = 48/106 (45%), Positives = 58/106 (54%) Frame = +1 Query: 1 HTLPILNNILSTFTSLLLPXXXXXXXXXXXXXXXXALSLFHSIPNPTPFSYNTLIRIHTL 180 H+ +L NIL+ FT+LL ALS+F+ IPNP+ F YNT+IR HTL Sbjct: 49 HSSLLLTNILTAFTALL--PTTNASPTTPAALTGYALSVFNRIPNPSTFGYNTMIRAHTL 106 Query: 181 LSSPLPAINXXXXXXXXXXXXXXHTFPFVLKASSQLNNALSLIQSL 318 LSSPL A+ HTFPF LKA S L ALSL Q+L Sbjct: 107 LSSPLAALVIFVRMRRLSVPPDTHTFPFCLKACSLL-PALSLAQTL 151 >ref|XP_002318186.1| predicted protein [Populus trichocarpa] gi|222858859|gb|EEE96406.1| predicted protein [Populus trichocarpa] Length = 537 Score = 65.5 bits (158), Expect = 4e-09 Identities = 31/66 (46%), Positives = 41/66 (62%) Frame = +1 Query: 106 ALSLFHSIPNPTPFSYNTLIRIHTLLSSPLPAINXXXXXXXXXXXXXXHTFPFVLKASSQ 285 A S+F+SI NP+ F YNT+IR+HTLLS P+PA++ H+FPF LKA +Q Sbjct: 77 AKSIFNSIQNPSTFCYNTIIRVHTLLSFPIPALHFFTQMRRLSVPLDSHSFPFTLKACAQ 136 Query: 286 LNNALS 303 L S Sbjct: 137 LGGVFS 142 >dbj|BAJ53111.1| JHL07K02.1 [Jatropha curcas] Length = 248 Score = 59.7 bits (143), Expect = 2e-07 Identities = 30/61 (49%), Positives = 37/61 (60%) Frame = +1 Query: 106 ALSLFHSIPNPTPFSYNTLIRIHTLLSSPLPAINXXXXXXXXXXXXXXHTFPFVLKASSQ 285 A+S+F +I NP+PF YN +IR HTL SSPL A+ H+FPFV KA SQ Sbjct: 73 AVSVFSAITNPSPFCYNLVIRAHTLHSSPLSALRFFLQMRRFSIPPDFHSFPFVFKACSQ 132 Query: 286 L 288 L Sbjct: 133 L 133