BLASTX nr result

ID: Glycyrrhiza23_contig00027060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027060
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532384.1| PREDICTED: pentatricopeptide repeat-containi...   101   7e-20
ref|XP_002281032.2| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    74   1e-11
ref|XP_002318186.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
dbj|BAJ53111.1| JHL07K02.1 [Jatropha curcas]                           60   2e-07

>ref|XP_003532384.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61800-like [Glycine max]
          Length = 577

 Score =  101 bits (251), Expect = 7e-20
 Identities = 60/106 (56%), Positives = 68/106 (64%)
 Frame = +1

Query: 1   HTLPILNNILSTFTSLLLPXXXXXXXXXXXXXXXXALSLFHSIPNPTPFSYNTLIRIHTL 180
           HT PILNNILST +SLL                  ALSLFHSIPNP+ FS+NTLIRIHTL
Sbjct: 32  HTFPILNNILSTLSSLLTTSSNSNSIITFY-----ALSLFHSIPNPSTFSFNTLIRIHTL 86

Query: 181 LSSPLPAINXXXXXXXXXXXXXXHTFPFVLKASSQLNNALSLIQSL 318
           L SPLPA++              HTFPFVLKAS+QL ++LSL QSL
Sbjct: 87  LLSPLPALHLFSTLRRLSLPPDFHTFPFVLKASAQL-HSLSLAQSL 131


>ref|XP_002281032.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g61800 [Vitis vinifera]
          Length = 576

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 48/106 (45%), Positives = 58/106 (54%)
 Frame = +1

Query: 1   HTLPILNNILSTFTSLLLPXXXXXXXXXXXXXXXXALSLFHSIPNPTPFSYNTLIRIHTL 180
           H+  +L NIL+ FT+LL                  ALS+F+ IPNP+ F YNT+IR HTL
Sbjct: 49  HSSLLLTNILTAFTALL--PTTNASPTTPAALTGYALSVFNRIPNPSTFGYNTMIRAHTL 106

Query: 181 LSSPLPAINXXXXXXXXXXXXXXHTFPFVLKASSQLNNALSLIQSL 318
           LSSPL A+               HTFPF LKA S L  ALSL Q+L
Sbjct: 107 LSSPLAALVIFVRMRRLSVPPDTHTFPFCLKACSLL-PALSLAQTL 151


>ref|XP_002318186.1| predicted protein [Populus trichocarpa] gi|222858859|gb|EEE96406.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 31/66 (46%), Positives = 41/66 (62%)
 Frame = +1

Query: 106 ALSLFHSIPNPTPFSYNTLIRIHTLLSSPLPAINXXXXXXXXXXXXXXHTFPFVLKASSQ 285
           A S+F+SI NP+ F YNT+IR+HTLLS P+PA++              H+FPF LKA +Q
Sbjct: 77  AKSIFNSIQNPSTFCYNTIIRVHTLLSFPIPALHFFTQMRRLSVPLDSHSFPFTLKACAQ 136

Query: 286 LNNALS 303
           L    S
Sbjct: 137 LGGVFS 142


>dbj|BAJ53111.1| JHL07K02.1 [Jatropha curcas]
          Length = 248

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/61 (49%), Positives = 37/61 (60%)
 Frame = +1

Query: 106 ALSLFHSIPNPTPFSYNTLIRIHTLLSSPLPAINXXXXXXXXXXXXXXHTFPFVLKASSQ 285
           A+S+F +I NP+PF YN +IR HTL SSPL A+               H+FPFV KA SQ
Sbjct: 73  AVSVFSAITNPSPFCYNLVIRAHTLHSSPLSALRFFLQMRRFSIPPDFHSFPFVFKACSQ 132

Query: 286 L 288
           L
Sbjct: 133 L 133


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