BLASTX nr result
ID: Glycyrrhiza23_contig00027049
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00027049 (410 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003548321.1| PREDICTED: DNA polymerase epsilon subunit 2-... 273 1e-71 ref|XP_002318325.1| predicted protein [Populus trichocarpa] gi|2... 270 7e-71 ref|XP_002531023.1| DNA polymerase epsilon subunit B, putative [... 267 6e-70 gb|EEC78576.1| hypothetical protein OsI_18564 [Oryza sativa Indi... 266 1e-69 ref|NP_001054723.1| Os05g0160800 [Oryza sativa Japonica Group] g... 266 1e-69 >ref|XP_003548321.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Glycine max] Length = 525 Score = 273 bits (697), Expect = 1e-71 Identities = 127/136 (93%), Positives = 130/136 (95%) Frame = +3 Query: 3 RLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKHLPNAIFSSNPCRVKFYTQEIV 182 RLKEHS+FLFIPGPDDAGPS VLPRCALPKYLTEELQKH+PNAIFSSNPCRVKFYTQEIV Sbjct: 353 RLKEHSKFLFIPGPDDAGPSNVLPRCALPKYLTEELQKHIPNAIFSSNPCRVKFYTQEIV 412 Query: 183 FFRQDMLYRMRRSCLMPPSMEETDDPFQHLVATITHQSHLCPLPLTVQPIIWNYDHCLNL 362 FFRQDMLYRMRRSCLMPPS EET D F+HLVATITHQSHLCPLPLTVQPIIWNYDHCL L Sbjct: 413 FFRQDMLYRMRRSCLMPPSTEETCDHFEHLVATITHQSHLCPLPLTVQPIIWNYDHCLYL 472 Query: 363 YPTPHAIVLGDRSQQK 410 YPTPH IVLGDRSQQK Sbjct: 473 YPTPHTIVLGDRSQQK 488 >ref|XP_002318325.1| predicted protein [Populus trichocarpa] gi|222858998|gb|EEE96545.1| predicted protein [Populus trichocarpa] Length = 518 Score = 270 bits (691), Expect = 7e-71 Identities = 122/136 (89%), Positives = 131/136 (96%) Frame = +3 Query: 3 RLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKHLPNAIFSSNPCRVKFYTQEIV 182 RLKEHSRF+FIPGP+DAGPSTVLPRC LPKYLTEELQKH+PNAIF+SNPCRVKFYTQEIV Sbjct: 347 RLKEHSRFMFIPGPEDAGPSTVLPRCPLPKYLTEELQKHIPNAIFASNPCRVKFYTQEIV 406 Query: 183 FFRQDMLYRMRRSCLMPPSMEETDDPFQHLVATITHQSHLCPLPLTVQPIIWNYDHCLNL 362 FFR D+LYRMRRSCLMPPS EETDDPF+HLVATITHQSHLCPLPL VQPIIWNYDHCL+L Sbjct: 407 FFRHDLLYRMRRSCLMPPSTEETDDPFEHLVATITHQSHLCPLPLIVQPIIWNYDHCLHL 466 Query: 363 YPTPHAIVLGDRSQQK 410 YP+PH IVLGDRS+QK Sbjct: 467 YPSPHTIVLGDRSEQK 482 >ref|XP_002531023.1| DNA polymerase epsilon subunit B, putative [Ricinus communis] gi|223529398|gb|EEF31361.1| DNA polymerase epsilon subunit B, putative [Ricinus communis] Length = 536 Score = 267 bits (683), Expect = 6e-70 Identities = 121/136 (88%), Positives = 130/136 (95%) Frame = +3 Query: 3 RLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKHLPNAIFSSNPCRVKFYTQEIV 182 RLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTE+LQKH+PNAIFS+NPCRVKFYTQEIV Sbjct: 365 RLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEDLQKHIPNAIFSTNPCRVKFYTQEIV 424 Query: 183 FFRQDMLYRMRRSCLMPPSMEETDDPFQHLVATITHQSHLCPLPLTVQPIIWNYDHCLNL 362 FFR D+LYRM RSCLMPPS EET DPF+HLVATITHQSHLCPLPL VQPIIWNYDHCL+L Sbjct: 425 FFRHDLLYRMHRSCLMPPSTEETADPFEHLVATITHQSHLCPLPLIVQPIIWNYDHCLHL 484 Query: 363 YPTPHAIVLGDRSQQK 410 YP+PH IVLGD+S+QK Sbjct: 485 YPSPHTIVLGDKSEQK 500 >gb|EEC78576.1| hypothetical protein OsI_18564 [Oryza sativa Indica Group] gi|222630291|gb|EEE62423.1| hypothetical protein OsJ_17214 [Oryza sativa Japonica Group] Length = 533 Score = 266 bits (680), Expect = 1e-69 Identities = 121/136 (88%), Positives = 128/136 (94%) Frame = +3 Query: 3 RLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKHLPNAIFSSNPCRVKFYTQEIV 182 RLKEHSRFLFIPGPDDAGPS LPRCALPKYLTEELQKH+PNAIF SNPCRVKFYTQEIV Sbjct: 360 RLKEHSRFLFIPGPDDAGPSKALPRCALPKYLTEELQKHIPNAIFVSNPCRVKFYTQEIV 419 Query: 183 FFRQDMLYRMRRSCLMPPSMEETDDPFQHLVATITHQSHLCPLPLTVQPIIWNYDHCLNL 362 FFRQD+LYRMRRSCL+PP+ EET DPF+HLVATITHQSHLCPLPLTVQPIIW+YDHCL L Sbjct: 420 FFRQDLLYRMRRSCLIPPTTEETSDPFEHLVATITHQSHLCPLPLTVQPIIWSYDHCLRL 479 Query: 363 YPTPHAIVLGDRSQQK 410 YPTPH IVLGD+S QK Sbjct: 480 YPTPHTIVLGDKSDQK 495 >ref|NP_001054723.1| Os05g0160800 [Oryza sativa Japonica Group] gi|51038114|gb|AAT93917.1| unknown protein [Oryza sativa Japonica Group] gi|55168061|gb|AAV43929.1| unknown protein [Oryza sativa Japonica Group] gi|113578274|dbj|BAF16637.1| Os05g0160800 [Oryza sativa Japonica Group] Length = 372 Score = 266 bits (680), Expect = 1e-69 Identities = 121/136 (88%), Positives = 128/136 (94%) Frame = +3 Query: 3 RLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKHLPNAIFSSNPCRVKFYTQEIV 182 RLKEHSRFLFIPGPDDAGPS LPRCALPKYLTEELQKH+PNAIF SNPCRVKFYTQEIV Sbjct: 199 RLKEHSRFLFIPGPDDAGPSKALPRCALPKYLTEELQKHIPNAIFVSNPCRVKFYTQEIV 258 Query: 183 FFRQDMLYRMRRSCLMPPSMEETDDPFQHLVATITHQSHLCPLPLTVQPIIWNYDHCLNL 362 FFRQD+LYRMRRSCL+PP+ EET DPF+HLVATITHQSHLCPLPLTVQPIIW+YDHCL L Sbjct: 259 FFRQDLLYRMRRSCLIPPTTEETSDPFEHLVATITHQSHLCPLPLTVQPIIWSYDHCLRL 318 Query: 363 YPTPHAIVLGDRSQQK 410 YPTPH IVLGD+S QK Sbjct: 319 YPTPHTIVLGDKSDQK 334