BLASTX nr result

ID: Glycyrrhiza23_contig00027049 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027049
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548321.1| PREDICTED: DNA polymerase epsilon subunit 2-...   273   1e-71
ref|XP_002318325.1| predicted protein [Populus trichocarpa] gi|2...   270   7e-71
ref|XP_002531023.1| DNA polymerase epsilon subunit B, putative [...   267   6e-70
gb|EEC78576.1| hypothetical protein OsI_18564 [Oryza sativa Indi...   266   1e-69
ref|NP_001054723.1| Os05g0160800 [Oryza sativa Japonica Group] g...   266   1e-69

>ref|XP_003548321.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Glycine max]
          Length = 525

 Score =  273 bits (697), Expect = 1e-71
 Identities = 127/136 (93%), Positives = 130/136 (95%)
 Frame = +3

Query: 3   RLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKHLPNAIFSSNPCRVKFYTQEIV 182
           RLKEHS+FLFIPGPDDAGPS VLPRCALPKYLTEELQKH+PNAIFSSNPCRVKFYTQEIV
Sbjct: 353 RLKEHSKFLFIPGPDDAGPSNVLPRCALPKYLTEELQKHIPNAIFSSNPCRVKFYTQEIV 412

Query: 183 FFRQDMLYRMRRSCLMPPSMEETDDPFQHLVATITHQSHLCPLPLTVQPIIWNYDHCLNL 362
           FFRQDMLYRMRRSCLMPPS EET D F+HLVATITHQSHLCPLPLTVQPIIWNYDHCL L
Sbjct: 413 FFRQDMLYRMRRSCLMPPSTEETCDHFEHLVATITHQSHLCPLPLTVQPIIWNYDHCLYL 472

Query: 363 YPTPHAIVLGDRSQQK 410
           YPTPH IVLGDRSQQK
Sbjct: 473 YPTPHTIVLGDRSQQK 488


>ref|XP_002318325.1| predicted protein [Populus trichocarpa] gi|222858998|gb|EEE96545.1|
           predicted protein [Populus trichocarpa]
          Length = 518

 Score =  270 bits (691), Expect = 7e-71
 Identities = 122/136 (89%), Positives = 131/136 (96%)
 Frame = +3

Query: 3   RLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKHLPNAIFSSNPCRVKFYTQEIV 182
           RLKEHSRF+FIPGP+DAGPSTVLPRC LPKYLTEELQKH+PNAIF+SNPCRVKFYTQEIV
Sbjct: 347 RLKEHSRFMFIPGPEDAGPSTVLPRCPLPKYLTEELQKHIPNAIFASNPCRVKFYTQEIV 406

Query: 183 FFRQDMLYRMRRSCLMPPSMEETDDPFQHLVATITHQSHLCPLPLTVQPIIWNYDHCLNL 362
           FFR D+LYRMRRSCLMPPS EETDDPF+HLVATITHQSHLCPLPL VQPIIWNYDHCL+L
Sbjct: 407 FFRHDLLYRMRRSCLMPPSTEETDDPFEHLVATITHQSHLCPLPLIVQPIIWNYDHCLHL 466

Query: 363 YPTPHAIVLGDRSQQK 410
           YP+PH IVLGDRS+QK
Sbjct: 467 YPSPHTIVLGDRSEQK 482


>ref|XP_002531023.1| DNA polymerase epsilon subunit B, putative [Ricinus communis]
           gi|223529398|gb|EEF31361.1| DNA polymerase epsilon
           subunit B, putative [Ricinus communis]
          Length = 536

 Score =  267 bits (683), Expect = 6e-70
 Identities = 121/136 (88%), Positives = 130/136 (95%)
 Frame = +3

Query: 3   RLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKHLPNAIFSSNPCRVKFYTQEIV 182
           RLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTE+LQKH+PNAIFS+NPCRVKFYTQEIV
Sbjct: 365 RLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEDLQKHIPNAIFSTNPCRVKFYTQEIV 424

Query: 183 FFRQDMLYRMRRSCLMPPSMEETDDPFQHLVATITHQSHLCPLPLTVQPIIWNYDHCLNL 362
           FFR D+LYRM RSCLMPPS EET DPF+HLVATITHQSHLCPLPL VQPIIWNYDHCL+L
Sbjct: 425 FFRHDLLYRMHRSCLMPPSTEETADPFEHLVATITHQSHLCPLPLIVQPIIWNYDHCLHL 484

Query: 363 YPTPHAIVLGDRSQQK 410
           YP+PH IVLGD+S+QK
Sbjct: 485 YPSPHTIVLGDKSEQK 500


>gb|EEC78576.1| hypothetical protein OsI_18564 [Oryza sativa Indica Group]
           gi|222630291|gb|EEE62423.1| hypothetical protein
           OsJ_17214 [Oryza sativa Japonica Group]
          Length = 533

 Score =  266 bits (680), Expect = 1e-69
 Identities = 121/136 (88%), Positives = 128/136 (94%)
 Frame = +3

Query: 3   RLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKHLPNAIFSSNPCRVKFYTQEIV 182
           RLKEHSRFLFIPGPDDAGPS  LPRCALPKYLTEELQKH+PNAIF SNPCRVKFYTQEIV
Sbjct: 360 RLKEHSRFLFIPGPDDAGPSKALPRCALPKYLTEELQKHIPNAIFVSNPCRVKFYTQEIV 419

Query: 183 FFRQDMLYRMRRSCLMPPSMEETDDPFQHLVATITHQSHLCPLPLTVQPIIWNYDHCLNL 362
           FFRQD+LYRMRRSCL+PP+ EET DPF+HLVATITHQSHLCPLPLTVQPIIW+YDHCL L
Sbjct: 420 FFRQDLLYRMRRSCLIPPTTEETSDPFEHLVATITHQSHLCPLPLTVQPIIWSYDHCLRL 479

Query: 363 YPTPHAIVLGDRSQQK 410
           YPTPH IVLGD+S QK
Sbjct: 480 YPTPHTIVLGDKSDQK 495


>ref|NP_001054723.1| Os05g0160800 [Oryza sativa Japonica Group]
           gi|51038114|gb|AAT93917.1| unknown protein [Oryza sativa
           Japonica Group] gi|55168061|gb|AAV43929.1| unknown
           protein [Oryza sativa Japonica Group]
           gi|113578274|dbj|BAF16637.1| Os05g0160800 [Oryza sativa
           Japonica Group]
          Length = 372

 Score =  266 bits (680), Expect = 1e-69
 Identities = 121/136 (88%), Positives = 128/136 (94%)
 Frame = +3

Query: 3   RLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKHLPNAIFSSNPCRVKFYTQEIV 182
           RLKEHSRFLFIPGPDDAGPS  LPRCALPKYLTEELQKH+PNAIF SNPCRVKFYTQEIV
Sbjct: 199 RLKEHSRFLFIPGPDDAGPSKALPRCALPKYLTEELQKHIPNAIFVSNPCRVKFYTQEIV 258

Query: 183 FFRQDMLYRMRRSCLMPPSMEETDDPFQHLVATITHQSHLCPLPLTVQPIIWNYDHCLNL 362
           FFRQD+LYRMRRSCL+PP+ EET DPF+HLVATITHQSHLCPLPLTVQPIIW+YDHCL L
Sbjct: 259 FFRQDLLYRMRRSCLIPPTTEETSDPFEHLVATITHQSHLCPLPLTVQPIIWSYDHCLRL 318

Query: 363 YPTPHAIVLGDRSQQK 410
           YPTPH IVLGD+S QK
Sbjct: 319 YPTPHTIVLGDKSDQK 334


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