BLASTX nr result

ID: Glycyrrhiza23_contig00027043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027043
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK46661.1| unknown [Lotus japonicus]                              238   3e-61
ref|XP_003621882.1| Geranylgeranyl transferase type-1 subunit be...   237   6e-61
ref|XP_003552693.1| PREDICTED: geranylgeranyl transferase type-1...   223   2e-56
ref|XP_003518650.1| PREDICTED: geranylgeranyl transferase type-1...   221   5e-56
ref|XP_004142747.1| PREDICTED: geranylgeranyl transferase type-1...   179   3e-43

>gb|AFK46661.1| unknown [Lotus japonicus]
          Length = 341

 Score =  238 bits (608), Expect = 3e-61
 Identities = 113/133 (84%), Positives = 122/133 (91%)
 Frame = -2

Query: 401 MEKDLHVTFVEMMYHLLSTPYESQEINHLTLAYFVISSLDILNALHSVDKEVIANWVLSF 222
           M KDLHVTF++MMY LL +PYESQEINHLTLAYF+IS LDILNALHSV+KE +ANWVLSF
Sbjct: 1   MNKDLHVTFLQMMYQLLPSPYESQEINHLTLAYFIISGLDILNALHSVEKEAVANWVLSF 60

Query: 221 QFHPGTMADPNNGQFYGFHGSRTSQFPPDQNGVFHHNNSHLASTYCALAILKIVGYDLSS 42
           Q HPGT  DPNNGQFYGFHGSRTSQFPPD+NGV  HNNSHLAS+YCALAILKIVGYDLSS
Sbjct: 61  QVHPGTKPDPNNGQFYGFHGSRTSQFPPDENGVLLHNNSHLASSYCALAILKIVGYDLSS 120

Query: 41  LDSESMLTSMRNL 3
           LDSE ML+SMRNL
Sbjct: 121 LDSELMLSSMRNL 133


>ref|XP_003621882.1| Geranylgeranyl transferase type-1 subunit beta [Medicago
           truncatula] gi|355496897|gb|AES78100.1| Geranylgeranyl
           transferase type-1 subunit beta [Medicago truncatula]
          Length = 520

 Score =  237 bits (605), Expect = 6e-61
 Identities = 112/133 (84%), Positives = 122/133 (91%)
 Frame = -2

Query: 401 MEKDLHVTFVEMMYHLLSTPYESQEINHLTLAYFVISSLDILNALHSVDKEVIANWVLSF 222
           ++KDLHVTF +MMYHLL  PYESQEINHLTLAYFVISSLDILN+LH V+KE +ANWVLSF
Sbjct: 15  IDKDLHVTFAQMMYHLLPNPYESQEINHLTLAYFVISSLDILNSLHLVEKEAVANWVLSF 74

Query: 221 QFHPGTMADPNNGQFYGFHGSRTSQFPPDQNGVFHHNNSHLASTYCALAILKIVGYDLSS 42
           Q   GT  DPNNGQFYGFHGS+TSQFPPD+NGVFHHNNSHLASTYCALAILKIVGYDLSS
Sbjct: 75  QVQRGTTNDPNNGQFYGFHGSKTSQFPPDENGVFHHNNSHLASTYCALAILKIVGYDLSS 134

Query: 41  LDSESMLTSMRNL 3
           LDSESM +SM+NL
Sbjct: 135 LDSESMSSSMKNL 147


>ref|XP_003552693.1| PREDICTED: geranylgeranyl transferase type-1 subunit beta-like
           [Glycine max]
          Length = 347

 Score =  223 bits (567), Expect = 2e-56
 Identities = 106/145 (73%), Positives = 126/145 (86%), Gaps = 2/145 (1%)
 Frame = -2

Query: 431 SSFPEEC--WEIMEKDLHVTFVEMMYHLLSTPYESQEINHLTLAYFVISSLDILNALHSV 258
           +S  EEC   EIMEKD HV F+E+MY++L +PYESQEINHLTLAYFVIS LDILN+LH V
Sbjct: 2   NSTEEECRGCEIMEKDAHVRFLELMYYMLPSPYESQEINHLTLAYFVISGLDILNSLHKV 61

Query: 257 DKEVIANWVLSFQFHPGTMADPNNGQFYGFHGSRTSQFPPDQNGVFHHNNSHLASTYCAL 78
            K+ + +WVLSFQ HPG  AD N+GQFYGFHGS+TSQFPPD+NGV  HNNSHLASTYCA+
Sbjct: 62  AKDAVISWVLSFQAHPGAKADLNDGQFYGFHGSKTSQFPPDENGVLIHNNSHLASTYCAI 121

Query: 77  AILKIVGYDLSSLDSESMLTSMRNL 3
           +ILKIVGY+LS+LDSE+++TSMRNL
Sbjct: 122 SILKIVGYELSNLDSETIVTSMRNL 146


>ref|XP_003518650.1| PREDICTED: geranylgeranyl transferase type-1 subunit beta-like
           [Glycine max]
          Length = 355

 Score =  221 bits (563), Expect = 5e-56
 Identities = 102/135 (75%), Positives = 122/135 (90%)
 Frame = -2

Query: 407 EIMEKDLHVTFVEMMYHLLSTPYESQEINHLTLAYFVISSLDILNALHSVDKEVIANWVL 228
           EIMEKD+HVTF+E+MY+LL +PYESQEINHLTLAYFVIS LDIL++LH V K+ + +WVL
Sbjct: 13  EIMEKDVHVTFLELMYYLLPSPYESQEINHLTLAYFVISGLDILDSLHKVAKDAVVSWVL 72

Query: 227 SFQFHPGTMADPNNGQFYGFHGSRTSQFPPDQNGVFHHNNSHLASTYCALAILKIVGYDL 48
           SFQ HPG   D N+GQFYGFHGS+TSQFPPD+NGV  HNNSHLASTYCA++ILKIVGY+L
Sbjct: 73  SFQAHPGAKTDLNDGQFYGFHGSKTSQFPPDENGVLIHNNSHLASTYCAISILKIVGYEL 132

Query: 47  SSLDSESMLTSMRNL 3
           S+LDSE+++TSMRNL
Sbjct: 133 SNLDSETIVTSMRNL 147


>ref|XP_004142747.1| PREDICTED: geranylgeranyl transferase type-1 subunit beta-like
           [Cucumis sativus] gi|449483868|ref|XP_004156717.1|
           PREDICTED: geranylgeranyl transferase type-1 subunit
           beta-like [Cucumis sativus]
          Length = 363

 Score =  179 bits (453), Expect = 3e-43
 Identities = 87/145 (60%), Positives = 107/145 (73%)
 Frame = -2

Query: 437 TSSSFPEECWEIMEKDLHVTFVEMMYHLLSTPYESQEINHLTLAYFVISSLDILNALHSV 258
           +S+  P       ++D HV F+EMMY LL   Y++QEINHLTLAYFVIS LD+L A+  V
Sbjct: 11  SSTPSPSSSSSGFDRDRHVMFLEMMYQLLPFQYQTQEINHLTLAYFVISGLDLLGAMDRV 70

Query: 257 DKEVIANWVLSFQFHPGTMADPNNGQFYGFHGSRTSQFPPDQNGVFHHNNSHLASTYCAL 78
           DK+ IANWVLSFQ  P   A+   G+ YGF GSR+SQFPPD+NG   HN SHLASTYCAL
Sbjct: 71  DKDKIANWVLSFQALPTNKAEKTTGELYGFCGSRSSQFPPDENGDLIHNGSHLASTYCAL 130

Query: 77  AILKIVGYDLSSLDSESMLTSMRNL 3
            ILK++GYD S+++SES+  SMRNL
Sbjct: 131 VILKVIGYDFSNINSESIAISMRNL 155


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