BLASTX nr result

ID: Glycyrrhiza23_contig00027036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027036
         (633 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003596625.1| F-box/LRR-repeat protein [Medicago truncatul...   152   4e-35
ref|XP_003596627.1| F-box/LRR-repeat protein [Medicago truncatul...   146   4e-33
ref|XP_003596623.1| F-box/LRR-repeat protein [Medicago truncatul...   138   7e-31
ref|XP_003596629.1| F-box/LRR-repeat protein [Medicago truncatul...   136   3e-30
ref|XP_003541805.1| PREDICTED: FBD-associated F-box protein At3g...   126   3e-27

>ref|XP_003596625.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355485673|gb|AES66876.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 411

 Score =  152 bits (385), Expect = 4e-35
 Identities = 94/195 (48%), Positives = 118/195 (60%)
 Frame = +3

Query: 39  SKKIKKTCFLNFVNRVXXXXXXXXXXXXXXVISEKYNPSHINDWISAVLNRRVKKLCVDS 218
           S +I+K CF++FV+RV               +SEKY+ S+IN WIS V+N RV+KL V  
Sbjct: 79  SNEIRKACFVDFVDRVLLRLNSEHIRSFSLKMSEKYDSSYINKWISIVINLRVRKLRVYL 138

Query: 219 LKELTLSSHGFLKSQSLEELVLKMKHCCVIKVPSSVRLLSLTVLELTKITFNCYSFNVSN 398
             +L +SS   LK QSLEELVL     C I + + V L SL VL L  I  +C S N S 
Sbjct: 139 QNDLAVSSDPLLKCQSLEELVLSR---CAITLSTFVCLSSLAVLNLYCIIISCSSSNDSK 195

Query: 399 KLTLNFPLLRKYETKDCTWSGVKSVTLNVPLLEVLSIEYSPLSQSAESNNAEIKFCASRL 578
            LTLNFP+LRK+ T  C  SGVKSV L VPLLEV+SI Y P  +   +++AEIKF ASR+
Sbjct: 196 TLTLNFPVLRKFVTFGCILSGVKSVILQVPLLEVVSISYHPFYR---TSHAEIKFYASRI 252

Query: 579 IEFRYYSRILPETLF 623
             F YY  +    LF
Sbjct: 253 ATFCYYGHMSDTILF 267


>ref|XP_003596627.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355485675|gb|AES66878.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 436

 Score =  146 bits (368), Expect = 4e-33
 Identities = 94/204 (46%), Positives = 121/204 (59%), Gaps = 8/204 (3%)
 Frame = +3

Query: 45  KIKKTCFLNFVNRVXXXXXXXXXXXXXXVISEKYNPSHIND-----WISAVLNRRVKKLC 209
           KI+K  F++FV+RV               +SE+YN  +IN      WIS V+N RV+ LC
Sbjct: 76  KIRKKGFVDFVDRVLLHLNSAHIQSFSLKMSEEYNYFYINSFNINKWISVVVNLRVRNLC 135

Query: 210 VDSLKELTLSSHGF---LKSQSLEELVLKMKHCCVIKVPSSVRLLSLTVLELTKITFNCY 380
           +   K L +    F    K QSLEELVL   + C   +PS V L SLT+L+L++IT  C 
Sbjct: 136 IYLKKGLEIQLVSFDALFKCQSLEELVL---NGCAFTLPSFVCLSSLTILKLSRITITCD 192

Query: 381 SFNVSNKLTLNFPLLRKYETKDCTWSGVKSVTLNVPLLEVLSIEYSPLSQSAESNNAEIK 560
           S N S  L LNFP LRKYET DCT+  VKSVTL VPLLEV+SI Y P       ++ EIK
Sbjct: 193 SSNESKTLALNFPALRKYETLDCTFLNVKSVTLQVPLLEVVSISYDPF---YHKSHCEIK 249

Query: 561 FCASRLIEFRYYSRILPETLFIEA 632
           F A+RL +F  YS  + +T+ +EA
Sbjct: 250 FYATRLAKF-CYSGYMSDTILLEA 272


>ref|XP_003596623.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355485671|gb|AES66874.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 213

 Score =  138 bits (348), Expect = 7e-31
 Identities = 76/153 (49%), Positives = 101/153 (66%), Gaps = 1/153 (0%)
 Frame = +3

Query: 39  SKKIKKTCFLNFVNRVXXXXXXXXXXXXXXV-ISEKYNPSHINDWISAVLNRRVKKLCVD 215
           S KI+K CF++F++RV              + ++  Y+ S+IN+ IS VL+ R+KKL VD
Sbjct: 64  SNKIRKKCFVDFIDRVLLHLLSSEDIQSFSLALARTYDSSYINNLISVVLSYRIKKLYVD 123

Query: 216 SLKELTLSSHGFLKSQSLEELVLKMKHCCVIKVPSSVRLLSLTVLELTKITFNCYSFNVS 395
             KELT+SS+   K +SLEEL+L   + C + +PS V   SLT+L+L++IT  C S N S
Sbjct: 124 LQKELTVSSYALFKCKSLEELML---NGCAVSLPSLVCFSSLTILKLSRITITCDSSNKS 180

Query: 396 NKLTLNFPLLRKYETKDCTWSGVKSVTLNVPLL 494
             L LNFP +RKYET DCTWSGV SVTL VPLL
Sbjct: 181 KTLALNFPAIRKYETLDCTWSGVNSVTLRVPLL 213


>ref|XP_003596629.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355485677|gb|AES66880.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 422

 Score =  136 bits (343), Expect = 3e-30
 Identities = 88/198 (44%), Positives = 114/198 (57%)
 Frame = +3

Query: 39  SKKIKKTCFLNFVNRVXXXXXXXXXXXXXXVISEKYNPSHINDWISAVLNRRVKKLCVDS 218
           S KI+K CF++FV+RV               + EKYN S+I  WIS V+N RVK LCV  
Sbjct: 61  SNKIRKKCFVDFVDRVLIDLNSAQIGSFSLSMLEKYNSSYIEKWISLVINLRVKNLCVYL 120

Query: 219 LKELTLSSHGFLKSQSLEELVLKMKHCCVIKVPSSVRLLSLTVLELTKITFNCYSFNVSN 398
            +++  S     K QSL ELVL   + C  ++PS V L SLT+L+L++I   C       
Sbjct: 121 QEKIFASFDALFKCQSLAELVL---NGCAFRLPSIVCLSSLTILKLSRINIFCDYSKKFK 177

Query: 399 KLTLNFPLLRKYETKDCTWSGVKSVTLNVPLLEVLSIEYSPLSQSAESNNAEIKFCASRL 578
            L LNFP LR YET DCT+S VKSV L VP LEV+SI YS    +    +AEIKF   R 
Sbjct: 178 TLALNFPALRHYETLDCTFSHVKSVNLQVP-LEVVSIRYSRFYHTL---HAEIKFYTMRP 233

Query: 579 IEFRYYSRILPETLFIEA 632
            +F  YS  + +T+ +EA
Sbjct: 234 AKF-CYSGYMSDTILLEA 250


>ref|XP_003541805.1| PREDICTED: FBD-associated F-box protein At3g52670-like [Glycine
           max]
          Length = 639

 Score =  126 bits (317), Expect = 3e-27
 Identities = 79/184 (42%), Positives = 111/184 (60%), Gaps = 1/184 (0%)
 Frame = +3

Query: 45  KIKKTCFLNFVNRVXXXXXXXXXXXXXXVISEKYNPSHINDWISAVLNRRVKKLCVDSLK 224
           KI K  FL+FV  V               +SEKY+P+H+N W++ +LNR V +L ++S K
Sbjct: 327 KIDKFHFLDFVYGVLFHLNNSRIQSFSLYLSEKYDPNHVNRWLANILNRGVTELSINSEK 386

Query: 225 ELTLSSHGFLKSQSLEELVLKMKHCCVIKVPSSVRLLSLTVLELTKITFNCYS-FNVSNK 401
           +L++SS+  L+SQ LE+LVLKMK      VP+ V L SL  L+L+ I   C +  N S  
Sbjct: 387 DLSISSYSILESQPLEKLVLKMK-LGFFTVPTFVYLSSLIFLKLSGIIVICNTPSNDSKN 445

Query: 402 LTLNFPLLRKYETKDCTWSGVKSVTLNVPLLEVLSIEYSPLSQSAESNNAEIKFCASRLI 581
           LTLNFP+LR+ E  +C+W  V+ VTL VPLLEVLSI+++     +   ++  K CA  L 
Sbjct: 446 LTLNFPVLRECEIVNCSWLNVEGVTLEVPLLEVLSIKHT--RSLSPDFHSITKVCAPHLR 503

Query: 582 EFRY 593
           E  Y
Sbjct: 504 ELSY 507


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