BLASTX nr result
ID: Glycyrrhiza23_contig00027030
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00027030
(617 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003606227.1| DNA polymerase epsilon catalytic subunit A [... 320 2e-85
ref|XP_003540789.1| PREDICTED: DNA polymerase epsilon catalytic ... 289 3e-76
ref|XP_003538511.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymera... 286 2e-75
ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, p... 226 2e-57
ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic ... 224 7e-57
>ref|XP_003606227.1| DNA polymerase epsilon catalytic subunit A [Medicago truncatula]
gi|355507282|gb|AES88424.1| DNA polymerase epsilon
catalytic subunit A [Medicago truncatula]
Length = 2248
Score = 320 bits (819), Expect = 2e-85
Identities = 160/212 (75%), Positives = 175/212 (82%), Gaps = 7/212 (3%)
Frame = +1
Query: 1 LSSTIQKIITIPAAMQKVSNPVPRVVHPDWLHKKVREKEDKFRQRKLVDVFNSMNRDGCS 180
LSS+IQKIITIPAAMQKV+NPVPRVVHPDWLHKKVREKEDKFRQRK+ D F SMN++ S
Sbjct: 1120 LSSSIQKIITIPAAMQKVANPVPRVVHPDWLHKKVREKEDKFRQRKIDDTFKSMNKNEHS 1179
Query: 181 KKHNDSNGIRRVMDDETVNDLEDFGNKGRGSTCGPRPIIRHYEANKEQHSVKLNGQEDSE 360
KKHNDS+G+ VM D+TVND+EDFGNKGR ST GPRPIIRHYEAN EQHS K NGQEDSE
Sbjct: 1180 KKHNDSSGVNLVMVDDTVNDMEDFGNKGRSSTLGPRPIIRHYEANNEQHSEKFNGQEDSE 1239
Query: 361 QQHNDSSSMDQPLSLSQQNQISCENVDRTVDYQGWLQIKKRKWKDMLARRKKR------- 519
QQH DSS++D QQN+ SCENVDRTVDYQGWLQ+KKRKWK ML +RKK+
Sbjct: 1240 QQHIDSSNID------QQNETSCENVDRTVDYQGWLQLKKRKWKSMLGKRKKQRMSFDFL 1293
Query: 520 RLENSKKSDRSNSILEQTNGNMNQGRSNVSSY 615
RLENSKKSD N LEQTN MN GRSNVSSY
Sbjct: 1294 RLENSKKSDHLNGSLEQTNSKMNHGRSNVSSY 1325
>ref|XP_003540789.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Glycine
max]
Length = 2207
Score = 289 bits (739), Expect = 3e-76
Identities = 148/205 (72%), Positives = 164/205 (80%)
Frame = +1
Query: 1 LSSTIQKIITIPAAMQKVSNPVPRVVHPDWLHKKVREKEDKFRQRKLVDVFNSMNRDGCS 180
LSS IQKIITIPAAMQKV+NPVPRVVHPDWLHKKVREKEDKFRQRKLVD F SMNR+ S
Sbjct: 1117 LSSAIQKIITIPAAMQKVANPVPRVVHPDWLHKKVREKEDKFRQRKLVDAFKSMNRNEHS 1176
Query: 181 KKHNDSNGIRRVMDDETVNDLEDFGNKGRGSTCGPRPIIRHYEANKEQHSVKLNGQEDSE 360
K+H+DS + VMD + VN+LEDFGNK R STC PRPIIRHYEAN EQHS K+N QED E
Sbjct: 1177 KRHDDSTRVPLVMDGDIVNELEDFGNKDRSSTCRPRPIIRHYEANNEQHSRKVNDQEDVE 1236
Query: 361 QQHNDSSSMDQPLSLSQQNQISCENVDRTVDYQGWLQIKKRKWKDMLARRKKRRLENSKK 540
QQHN +PL +NV R+VDYQGWLQIKKR WKD+L RRKK+RLENSKK
Sbjct: 1237 QQHN------KPLQ---------QNVYRSVDYQGWLQIKKRTWKDILERRKKQRLENSKK 1281
Query: 541 SDRSNSILEQTNGNMNQGRSNVSSY 615
SDR +S+LEQ NG NQGRS+VSSY
Sbjct: 1282 SDRVSSVLEQMNGKGNQGRSHVSSY 1306
>ref|XP_003538511.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic
subunit A-like [Glycine max]
Length = 2205
Score = 286 bits (732), Expect = 2e-75
Identities = 147/205 (71%), Positives = 163/205 (79%)
Frame = +1
Query: 1 LSSTIQKIITIPAAMQKVSNPVPRVVHPDWLHKKVREKEDKFRQRKLVDVFNSMNRDGCS 180
LSS IQKIITIPAAMQKV+NPVPRVVHPDWLHKKVREKEDKFRQRKLVD F SMNR+ S
Sbjct: 1116 LSSAIQKIITIPAAMQKVANPVPRVVHPDWLHKKVREKEDKFRQRKLVDAFKSMNRNEHS 1175
Query: 181 KKHNDSNGIRRVMDDETVNDLEDFGNKGRGSTCGPRPIIRHYEANKEQHSVKLNGQEDSE 360
KKHNDSN + V+DD+ VN+LEDFGNK R STC PRPIIRHYEAN E+HS KLN Q D E
Sbjct: 1176 KKHNDSNRVPLVIDDDIVNELEDFGNKDRSSTCRPRPIIRHYEANNERHSGKLNDQ-DVE 1234
Query: 361 QQHNDSSSMDQPLSLSQQNQISCENVDRTVDYQGWLQIKKRKWKDMLARRKKRRLENSKK 540
QQHN +PL + VD+ VDY+GWLQIKK+ WKD+L RRKKRRLENSKK
Sbjct: 1235 QQHN------KPLQ---------QKVDKNVDYEGWLQIKKQTWKDILERRKKRRLENSKK 1279
Query: 541 SDRSNSILEQTNGNMNQGRSNVSSY 615
SDR N +L+Q NG NQGRS+VSSY
Sbjct: 1280 SDRVNGVLQQMNGKGNQGRSHVSSY 1304
>ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, putative [Ricinus
communis] gi|223531477|gb|EEF33309.1| DNA polymerase
epsilon, catalytic subunit, putative [Ricinus communis]
Length = 2227
Score = 226 bits (577), Expect = 2e-57
Identities = 120/210 (57%), Positives = 147/210 (70%), Gaps = 5/210 (2%)
Frame = +1
Query: 1 LSSTIQKIITIPAAMQKVSNPVPRVVHPDWLHKKVREKEDKFRQRKLVDVFNSMNRDGCS 180
LSS IQKIITIPAAMQKV+NPVPRVVHPDWLHKKVREKEDKFRQRKLVD+F +++
Sbjct: 1108 LSSAIQKIITIPAAMQKVANPVPRVVHPDWLHKKVREKEDKFRQRKLVDIFRLSSKEDFV 1167
Query: 181 KKHNDSNGIRRVMDDETVNDLEDFGNKGRGSTCGPRPIIRHYEANKEQHSVKLNGQEDSE 360
+K+ND+ +MD+E V DLEDF NK ST GPRPI+ Y N E+HSVK G+ DS
Sbjct: 1168 RKNNDTITDNCMMDEENVEDLEDFRNKSI-STNGPRPIVHCYATNSEEHSVKATGRMDSS 1226
Query: 361 QQHNDS-SSMDQPLSLSQQNQISCENVDRTVDYQGWLQIKKRKWKDMLARRKKRRLENSK 537
Q D+ S+ + SL QQ S E++DR VDYQGWL++KKRKWKD L RRK++RL N +
Sbjct: 1227 HQQTDNGESVHELSSLVQQTASSGESIDRNVDYQGWLELKKRKWKDTLERRKRQRLGNLR 1286
Query: 538 KSDRSNSILEQTNGNMN----QGRSNVSSY 615
S +N E + +N Q R+ V SY
Sbjct: 1287 NSSHANGDFEPLSSVINRKKAQSRTGVGSY 1316
>ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic subunit A [Vitis
vinifera]
Length = 2214
Score = 224 bits (572), Expect = 7e-57
Identities = 115/209 (55%), Positives = 150/209 (71%), Gaps = 4/209 (1%)
Frame = +1
Query: 1 LSSTIQKIITIPAAMQKVSNPVPRVVHPDWLHKKVREKEDKFRQRKLVDVFNSMNRDGCS 180
L S IQKIITIPAAMQKV+NPVPRVVHPDWL+KKVREKE+KFRQRKLVD+F S+ RD
Sbjct: 1106 LGSAIQKIITIPAAMQKVANPVPRVVHPDWLYKKVREKEEKFRQRKLVDMFGSLKRDDNV 1165
Query: 181 KKHNDSNGIRRVMDDETVNDLEDFGNKGRGSTCGPRPIIRHYEANKEQHSVKLNGQEDSE 360
K + D+ V+ +E + DLEDF NKGR S+ GPRPI+R YE N +Q S +N +S
Sbjct: 1166 KMNVDAITSNHVISEENIEDLEDFRNKGRTSSAGPRPIVRCYEVNGKQQSDAMNCLANSP 1225
Query: 361 QQHNDSSSMDQPLSLSQQNQISCENVDRTVDYQGWLQIKKRKWKDMLARRKKRRLENSKK 540
Q+ + S + L+ Q IS +N+DR VDYQGWL++KKRKWKD +RK++R++NSK
Sbjct: 1226 QEPANHS--ESALTPMQPTDISTDNIDRNVDYQGWLEMKKRKWKDAREKRKRQRMDNSKT 1283
Query: 541 SDRSNSILEQTNGNMN----QGRSNVSSY 615
S+++N + E G +N QGR+ V+SY
Sbjct: 1284 SNQTNGVSELPGGVINHKQAQGRTGVNSY 1312