BLASTX nr result

ID: Glycyrrhiza23_contig00027016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027016
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK42693.1| unknown [Lotus japonicus]                               89   3e-16
ref|XP_003516694.1| PREDICTED: remorin-like [Glycine max]              75   7e-12
ref|NP_001235241.1| uncharacterized protein LOC100305683 [Glycin...    74   2e-11
ref|XP_003611122.1| Remorin [Medicago truncatula] gi|355512457|g...    73   3e-11
ref|XP_003611121.1| Remorin [Medicago truncatula] gi|355512456|g...    73   3e-11

>gb|AFK42693.1| unknown [Lotus japonicus]
          Length = 194

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 47/76 (61%), Positives = 57/76 (75%)
 Frame = -2

Query: 229 EHSPVQKKEESEKLDPSNAVVNQQEPNEQVTSPLVQKVADDAGKKDTGDSIDRDAGLARV 50
           E  P  +++ESEK +     V Q+EP+++V SP+VQ VADD  KK TG S+DRDA LARV
Sbjct: 23  EQEPQVEEKESEKPE----AVTQEEPHKEVPSPIVQNVADDDAKKVTGGSVDRDAALARV 78

Query: 49  VAEKRLALIKAWEESE 2
           V EKRLALIKAWEESE
Sbjct: 79  VTEKRLALIKAWEESE 94


>ref|XP_003516694.1| PREDICTED: remorin-like [Glycine max]
          Length = 191

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 42/79 (53%), Positives = 54/79 (68%), Gaps = 3/79 (3%)
 Frame = -2

Query: 229 EHSPVQKKEESEKLDPSNAVVNQQEPNEQVTSP---LVQKVADDAGKKDTGDSIDRDAGL 59
           EH+   +++E EK +P         PN++VT P     Q+VAD A KKDT +S+D+DA L
Sbjct: 22  EHNSSVQEKELEKPEP---------PNDKVTPPSPAAAQEVADHASKKDTEESLDKDAML 72

Query: 58  ARVVAEKRLALIKAWEESE 2
           ARVV EKRLAL+KAWEESE
Sbjct: 73  ARVVTEKRLALVKAWEESE 91


>ref|NP_001235241.1| uncharacterized protein LOC100305683 [Glycine max]
           gi|255626299|gb|ACU13494.1| unknown [Glycine max]
          Length = 190

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 41/79 (51%), Positives = 54/79 (68%), Gaps = 3/79 (3%)
 Frame = -2

Query: 229 EHSPVQKKEESEKLDPSNAVVNQQEPNEQVTSP---LVQKVADDAGKKDTGDSIDRDAGL 59
           EH+   +++E EK +P         PN++VT P     Q+VAD A KKDT +S+D+DA L
Sbjct: 21  EHNSSAQEKELEKPEP---------PNDKVTPPSPVAAQEVADHASKKDTEESVDKDAML 71

Query: 58  ARVVAEKRLALIKAWEESE 2
           A+V+ EKRLALIKAWEESE
Sbjct: 72  AKVLTEKRLALIKAWEESE 90


>ref|XP_003611122.1| Remorin [Medicago truncatula] gi|355512457|gb|AES94080.1| Remorin
           [Medicago truncatula]
          Length = 194

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 49/87 (56%), Positives = 56/87 (64%), Gaps = 11/87 (12%)
 Frame = -2

Query: 229 EHSPVQKKEESEKLDPSNAVVNQQEPNEQVTSPLV-QKVADDAG----------KKDTGD 83
           E SPV +K+ SE L   + +   QEPN+Q  S L  QKVADD            KKD  D
Sbjct: 27  ELSPVVEKD-SETL---STISISQEPNQQAISTLDDQKVADDHADNKETGDHDDKKDAKD 82

Query: 82  SIDRDAGLARVVAEKRLALIKAWEESE 2
           S DRDAGLA++VAEKRLALIKAWEESE
Sbjct: 83  STDRDAGLAKIVAEKRLALIKAWEESE 109


>ref|XP_003611121.1| Remorin [Medicago truncatula] gi|355512456|gb|AES94079.1| Remorin
           [Medicago truncatula]
          Length = 209

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 49/87 (56%), Positives = 56/87 (64%), Gaps = 11/87 (12%)
 Frame = -2

Query: 229 EHSPVQKKEESEKLDPSNAVVNQQEPNEQVTSPLV-QKVADDAG----------KKDTGD 83
           E SPV +K+ SE L   + +   QEPN+Q  S L  QKVADD            KKD  D
Sbjct: 27  ELSPVVEKD-SETL---STISISQEPNQQAISTLDDQKVADDHADNKETGDHDDKKDAKD 82

Query: 82  SIDRDAGLARVVAEKRLALIKAWEESE 2
           S DRDAGLA++VAEKRLALIKAWEESE
Sbjct: 83  STDRDAGLAKIVAEKRLALIKAWEESE 109


Top