BLASTX nr result

ID: Glycyrrhiza23_contig00027007 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027007
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK41173.1| unknown [Lotus japonicus]                              231   5e-59
ref|XP_003550038.1| PREDICTED: small RNA degrading nuclease 3-li...   231   5e-59
ref|XP_002278458.2| PREDICTED: small RNA degrading nuclease 3-li...   162   3e-38
emb|CBI33775.3| unnamed protein product [Vitis vinifera]              162   3e-38
ref|XP_004141901.1| PREDICTED: small RNA degrading nuclease 3-li...   154   8e-36

>gb|AFK41173.1| unknown [Lotus japonicus]
          Length = 525

 Score =  231 bits (590), Expect = 5e-59
 Identities = 108/134 (80%), Positives = 122/134 (91%)
 Frame = -2

Query: 402 KKRGLKGELGDWKEFLNSHDKRFGANVSDPAKRPHEILAAFLKTFSRDDDLKFFRNVMRH 223
           +KRG+KG LGDWKEFLNS+DK+FGA++SDPAKR HE+LAAFLKTFS++DDLKFF N+MRH
Sbjct: 24  QKRGMKGNLGDWKEFLNSYDKKFGASMSDPAKRTHEVLAAFLKTFSKEDDLKFFANIMRH 83

Query: 222 HSNQYMVEKLKDKSHVSPEQKLVQVTLQHPLYPLDYSFPSIDEEWVIINLINKTKSLKST 43
           HSNQY VEKLKDKSH SPEQ LVQ+TLQHPLYPLDYSF SIDE WVIINL    K+++ST
Sbjct: 84  HSNQYSVEKLKDKSHDSPEQGLVQITLQHPLYPLDYSFQSIDEGWVIINLRKNKKAMRST 143

Query: 42  AMVAVDCEMVLCED 1
           AMVAVDCEMVLCED
Sbjct: 144 AMVAVDCEMVLCED 157


>ref|XP_003550038.1| PREDICTED: small RNA degrading nuclease 3-like [Glycine max]
          Length = 509

 Score =  231 bits (590), Expect = 5e-59
 Identities = 105/134 (78%), Positives = 121/134 (90%)
 Frame = -2

Query: 402 KKRGLKGELGDWKEFLNSHDKRFGANVSDPAKRPHEILAAFLKTFSRDDDLKFFRNVMRH 223
           +KRGLKG LG WKEFLNSHDK+FGA +SDP+KR HE+LAAFLKTFS+++DLKFF N+MRH
Sbjct: 21  QKRGLKGNLGGWKEFLNSHDKKFGAGLSDPSKRSHEVLAAFLKTFSKEEDLKFFDNIMRH 80

Query: 222 HSNQYMVEKLKDKSHVSPEQKLVQVTLQHPLYPLDYSFPSIDEEWVIINLINKTKSLKST 43
           HSNQYM+E+LKDKSH SPEQ+LVQ TLQHPLYPLDYSFPSIDE W+++N  NK K +KST
Sbjct: 81  HSNQYMLERLKDKSHDSPEQRLVQATLQHPLYPLDYSFPSIDEGWIVVNFKNKPKVMKST 140

Query: 42  AMVAVDCEMVLCED 1
            MVAVDCEMVLCED
Sbjct: 141 EMVAVDCEMVLCED 154


>ref|XP_002278458.2| PREDICTED: small RNA degrading nuclease 3-like [Vitis vinifera]
          Length = 389

 Score =  162 bits (411), Expect = 3e-38
 Identities = 72/136 (52%), Positives = 108/136 (79%), Gaps = 2/136 (1%)
 Frame = -2

Query: 402 KKRGLKGELGDWKEFLNSHDKRFGANVSDPAKRPHEILAAFLKTFSRDDDLKFFRNVMRH 223
           +KRGL+G  G WK+FL+++D++ G ++SDP++RP + L +FLKTFS+++DLKFF  +++ 
Sbjct: 21  QKRGLEGSKGSWKDFLSTYDRKLGPSLSDPSRRPVDTLVSFLKTFSKEEDLKFFAKILQC 80

Query: 222 HSNQYMVEKLKDKSH--VSPEQKLVQVTLQHPLYPLDYSFPSIDEEWVIINLINKTKSLK 49
           ++N+ +VE+ K KSH   SPEQ+L+++TL+HP YPLDYSFPS +E W++  +  K K  +
Sbjct: 81  YANRKVVEEFKTKSHGKESPEQRLIRLTLEHPQYPLDYSFPSHEEGWMVTKIRQKFKFTR 140

Query: 48  STAMVAVDCEMVLCED 1
           S AM+AVDCEMVLCED
Sbjct: 141 SNAMLAVDCEMVLCED 156


>emb|CBI33775.3| unnamed protein product [Vitis vinifera]
          Length = 360

 Score =  162 bits (411), Expect = 3e-38
 Identities = 72/136 (52%), Positives = 108/136 (79%), Gaps = 2/136 (1%)
 Frame = -2

Query: 402 KKRGLKGELGDWKEFLNSHDKRFGANVSDPAKRPHEILAAFLKTFSRDDDLKFFRNVMRH 223
           +KRGL+G  G WK+FL+++D++ G ++SDP++RP + L +FLKTFS+++DLKFF  +++ 
Sbjct: 21  QKRGLEGSKGSWKDFLSTYDRKLGPSLSDPSRRPVDTLVSFLKTFSKEEDLKFFAKILQC 80

Query: 222 HSNQYMVEKLKDKSH--VSPEQKLVQVTLQHPLYPLDYSFPSIDEEWVIINLINKTKSLK 49
           ++N+ +VE+ K KSH   SPEQ+L+++TL+HP YPLDYSFPS +E W++  +  K K  +
Sbjct: 81  YANRKVVEEFKTKSHGKESPEQRLIRLTLEHPQYPLDYSFPSHEEGWMVTKIRQKFKFTR 140

Query: 48  STAMVAVDCEMVLCED 1
           S AM+AVDCEMVLCED
Sbjct: 141 SNAMLAVDCEMVLCED 156


>ref|XP_004141901.1| PREDICTED: small RNA degrading nuclease 3-like [Cucumis sativus]
           gi|449517369|ref|XP_004165718.1| PREDICTED: small RNA
           degrading nuclease 3-like [Cucumis sativus]
          Length = 524

 Score =  154 bits (390), Expect = 8e-36
 Identities = 71/136 (52%), Positives = 99/136 (72%), Gaps = 2/136 (1%)
 Frame = -2

Query: 402 KKRGLKGELGDWKEFLNSHDKRFGANVSDPAKRPHEILAAFLKTFSRDDDLKFFRNVMRH 223
           +KRG+ G  GDWKEFLNS D +FGA++SDP+KRP+++L AFLKTF +++DL F   V + 
Sbjct: 21  QKRGMTGSEGDWKEFLNSRDPKFGASMSDPSKRPNDLLIAFLKTFDKEEDLMFLDKVFQC 80

Query: 222 HSNQYMVEKLKD--KSHVSPEQKLVQVTLQHPLYPLDYSFPSIDEEWVIINLINKTKSLK 49
           +  +  V+++      + SPEQKLV++TL+HP YPL+YSFPS D+EWV+     K+K   
Sbjct: 81  NEKRNFVKQVSQITPENESPEQKLVRLTLEHPQYPLEYSFPSYDKEWVVTKFSQKSKGPN 140

Query: 48  STAMVAVDCEMVLCED 1
           S  + A+DCEMVLCED
Sbjct: 141 SNLIYAIDCEMVLCED 156


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