BLASTX nr result
ID: Glycyrrhiza23_contig00026983
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00026983
(305 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003520480.1| PREDICTED: cell division cycle protein 48 ho... 179 2e-43
ref|XP_003624920.1| AAA family ATPase CDC48 subfamily [Medicago ... 164 5e-39
ref|XP_002277745.2| PREDICTED: cell division cycle protein 48 ho... 161 6e-38
emb|CBI32813.3| unnamed protein product [Vitis vinifera] 161 6e-38
ref|XP_002308870.1| predicted protein [Populus trichocarpa] gi|2... 160 1e-37
>ref|XP_003520480.1| PREDICTED: cell division cycle protein 48 homolog AF_1297-like
[Glycine max]
Length = 1036
Score = 179 bits (455), Expect = 2e-43
Identities = 87/101 (86%), Positives = 91/101 (90%)
Frame = +3
Query: 3 SSVKDVLSSFGLRATRGVLLHGPPGTGKTSLAQLCAHDAGVSFFPINGPEIIKPYYGESE 182
SSV D LSSFGLR TRGVLLHGPPGTGKTSLAQLCAHD GV FFPINGPEI+ YYGESE
Sbjct: 434 SSVSDALSSFGLRTTRGVLLHGPPGTGKTSLAQLCAHDVGVKFFPINGPEIVTQYYGESE 493
Query: 183 QALHEVFDSAIQAAPAVVFIDEVDAITPTRKDGGEELSKRL 305
Q LHE+FDSAIQAAPAVVFIDE+DAI P RKDGGEELS+RL
Sbjct: 494 QQLHELFDSAIQAAPAVVFIDELDAIAPARKDGGEELSQRL 534
Score = 80.5 bits (197), Expect = 1e-13
Identities = 39/99 (39%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Frame = +3
Query: 15 DVLSSFGLRATRGVLLHGPPGTGKTSLAQLCAHDAGVSFFPINGPEIIKPYYGESEQALH 194
D + G R GVL+ GPPG KT +A+ A +AG++F + GPE+ + GESE+A+
Sbjct: 767 DAFNRIGTRPPTGVLMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVR 826
Query: 195 EVFDSAIQAAPAVVFIDEVDAITPTR--KDGGEELSKRL 305
+F A AP++VF DE+D++ TR + G +S R+
Sbjct: 827 SLFAKARANAPSIVFFDEIDSLAVTRGKESDGVSVSDRV 865
>ref|XP_003624920.1| AAA family ATPase CDC48 subfamily [Medicago truncatula]
gi|355499935|gb|AES81138.1| AAA family ATPase CDC48
subfamily [Medicago truncatula]
Length = 1046
Score = 164 bits (416), Expect = 5e-39
Identities = 80/100 (80%), Positives = 89/100 (89%)
Frame = +3
Query: 6 SVKDVLSSFGLRATRGVLLHGPPGTGKTSLAQLCAHDAGVSFFPINGPEIIKPYYGESEQ 185
S+ D+LS FG + TRGVLLHGPPGTGKTSLAQLCAHDAGV+FF INGPEI+ YGESE+
Sbjct: 408 SLNDILSRFGQQNTRGVLLHGPPGTGKTSLAQLCAHDAGVNFFSINGPEIVTENYGESEK 467
Query: 186 ALHEVFDSAIQAAPAVVFIDEVDAITPTRKDGGEELSKRL 305
AL EVFDSAIQAAPAV+FID++DAI P RKDGGEELSKRL
Sbjct: 468 ALQEVFDSAIQAAPAVLFIDKIDAIAPPRKDGGEELSKRL 507
Score = 82.0 bits (201), Expect = 5e-14
Identities = 37/95 (38%), Positives = 58/95 (61%)
Frame = +3
Query: 12 KDVLSSFGLRATRGVLLHGPPGTGKTSLAQLCAHDAGVSFFPINGPEIIKPYYGESEQAL 191
+D + G VL+ GPPG KT +A+ A +AG++F + GPE+ + GESE+A+
Sbjct: 741 RDAFTRIGTDPPTAVLMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAV 800
Query: 192 HEVFDSAIQAAPAVVFIDEVDAITPTRKDGGEELS 296
+FD A APA++F DE+D++ TR G+ +S
Sbjct: 801 RSLFDKARANAPAIIFFDEIDSLAITRGKDGDGVS 835
>ref|XP_002277745.2| PREDICTED: cell division cycle protein 48 homolog AF_1297-like
[Vitis vinifera]
Length = 1030
Score = 161 bits (407), Expect = 6e-38
Identities = 78/101 (77%), Positives = 87/101 (86%)
Frame = +3
Query: 3 SSVKDVLSSFGLRATRGVLLHGPPGTGKTSLAQLCAHDAGVSFFPINGPEIIKPYYGESE 182
+SVK+ LSS GLR T+GVLLHGPPGTGKTSLAQLC DAGV+ F +NG EI+ YYGESE
Sbjct: 441 TSVKNTLSSMGLRTTKGVLLHGPPGTGKTSLAQLCICDAGVNLFSVNGAEIVSQYYGESE 500
Query: 183 QALHEVFDSAIQAAPAVVFIDEVDAITPTRKDGGEELSKRL 305
QALHE+FDSA QAAPAVVFIDE+DAI P RKDGGEELS R+
Sbjct: 501 QALHEIFDSASQAAPAVVFIDELDAIAPARKDGGEELSHRI 541
Score = 77.8 bits (190), Expect = 8e-13
Identities = 35/87 (40%), Positives = 52/87 (59%)
Frame = +3
Query: 12 KDVLSSFGLRATRGVLLHGPPGTGKTSLAQLCAHDAGVSFFPINGPEIIKPYYGESEQAL 191
+D G R GVLL GPPG KT +A+ A +AG++F + GPE+ + GESE+A+
Sbjct: 764 QDAFKRIGTRPPTGVLLFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAV 823
Query: 192 HEVFDSAIQAAPAVVFIDEVDAITPTR 272
+F A AP+++F DE+D + R
Sbjct: 824 RSLFAKARANAPSIIFFDEIDGLAVIR 850
>emb|CBI32813.3| unnamed protein product [Vitis vinifera]
Length = 956
Score = 161 bits (407), Expect = 6e-38
Identities = 78/101 (77%), Positives = 87/101 (86%)
Frame = +3
Query: 3 SSVKDVLSSFGLRATRGVLLHGPPGTGKTSLAQLCAHDAGVSFFPINGPEIIKPYYGESE 182
+SVK+ LSS GLR T+GVLLHGPPGTGKTSLAQLC DAGV+ F +NG EI+ YYGESE
Sbjct: 420 TSVKNTLSSMGLRTTKGVLLHGPPGTGKTSLAQLCICDAGVNLFSVNGAEIVSQYYGESE 479
Query: 183 QALHEVFDSAIQAAPAVVFIDEVDAITPTRKDGGEELSKRL 305
QALHE+FDSA QAAPAVVFIDE+DAI P RKDGGEELS R+
Sbjct: 480 QALHEIFDSASQAAPAVVFIDELDAIAPARKDGGEELSHRI 520
Score = 77.8 bits (190), Expect = 8e-13
Identities = 35/87 (40%), Positives = 52/87 (59%)
Frame = +3
Query: 12 KDVLSSFGLRATRGVLLHGPPGTGKTSLAQLCAHDAGVSFFPINGPEIIKPYYGESEQAL 191
+D G R GVLL GPPG KT +A+ A +AG++F + GPE+ + GESE+A+
Sbjct: 690 QDAFKRIGTRPPTGVLLFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAV 749
Query: 192 HEVFDSAIQAAPAVVFIDEVDAITPTR 272
+F A AP+++F DE+D + R
Sbjct: 750 RSLFAKARANAPSIIFFDEIDGLAVIR 776
>ref|XP_002308870.1| predicted protein [Populus trichocarpa] gi|222854846|gb|EEE92393.1|
predicted protein [Populus trichocarpa]
Length = 1042
Score = 160 bits (404), Expect = 1e-37
Identities = 76/101 (75%), Positives = 87/101 (86%)
Frame = +3
Query: 3 SSVKDVLSSFGLRATRGVLLHGPPGTGKTSLAQLCAHDAGVSFFPINGPEIIKPYYGESE 182
SS K+ LS FGLR T+GVLLHGPPGTGKTSLA+LC DAGV+ F +NGPEI YYGESE
Sbjct: 426 SSTKNTLSCFGLRTTKGVLLHGPPGTGKTSLARLCVIDAGVNLFSVNGPEIFSQYYGESE 485
Query: 183 QALHEVFDSAIQAAPAVVFIDEVDAITPTRKDGGEELSKRL 305
QA+H+VFDSA Q+APAVVFIDE+DAI P RKDGGEELS+R+
Sbjct: 486 QAMHKVFDSACQSAPAVVFIDELDAIAPARKDGGEELSQRM 526
Score = 75.9 bits (185), Expect = 3e-12
Identities = 36/100 (36%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Frame = +3
Query: 12 KDVLSSFGLRATRGVLLHGPPGTGKTSLAQLCAHDAGVSFFPINGPEIIKPYYGESEQAL 191
+D G R G+L+ GPPG KT +A+ A AG++F + GPE+ + GESE+A+
Sbjct: 781 QDAFKRIGTRPPTGILMFGPPGCSKTLMARAVASKAGLNFLAVKGPELFSKWVGESEKAV 840
Query: 192 HEVFDSAIQAAPAVVFIDEVD--AITPTRKDGGEELSKRL 305
+F A AP+++F DE+D A+ ++ G +S R+
Sbjct: 841 RSLFAKARANAPSIIFFDEIDGLAVIRGKESDGVSVSDRV 880