BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026956
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626000.1| Pentatricopeptide repeat protein [Medicago t...   119   3e-25
emb|CBI36977.3| unnamed protein product [Vitis vinifera]               87   2e-15
ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containi...    77   2e-12
emb|CBI40215.3| unnamed protein product [Vitis vinifera]               74   1e-11
ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containi...    74   1e-11

>ref|XP_003626000.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355501015|gb|AES82218.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 607

 Score =  119 bits (297), Expect = 3e-25
 Identities = 57/83 (68%), Positives = 69/83 (83%), Gaps = 2/83 (2%)
 Frame = -3

Query: 245 MCTVT--APELNHLISAYTNDNNVKQARRLLDENPSSRNIVSWNMIMTAYVQRHQMGLAR 72
           MCTVT   P+LN++I+ Y ++NNVKQA +LLDEN  S NIVSWNM+MTAY+Q +Q+G   
Sbjct: 1   MCTVTITTPQLNYMINTYIDNNNVKQAHKLLDENLLSCNIVSWNMVMTAYLQHNQIGPVH 60

Query: 71  DLFDQMPLKDAVSWNIMLSGFHR 3
           DLFD+MPLKDAVSWNIMLSGF R
Sbjct: 61  DLFDKMPLKDAVSWNIMLSGFQR 83



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 26/70 (37%), Positives = 40/70 (57%)
 Frame = -3

Query: 218 NHLISAYTNDNNVKQARRLLDENPSSRNIVSWNMIMTAYVQRHQMGLARDLFDQMPLKDA 39
           N L+S+Y        A+   D+ P  RNI+SW  ++  YV+  Q+  AR +FD M  ++ 
Sbjct: 176 NALVSSYMELGKFVDAQTAFDQMPQ-RNIISWTTLVNGYVKNKQVNKARSVFDDMSERNV 234

Query: 38  VSWNIMLSGF 9
           VSW  M+SG+
Sbjct: 235 VSWTAMISGY 244


>emb|CBI36977.3| unnamed protein product [Vitis vinifera]
          Length = 372

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 39/84 (46%), Positives = 58/84 (69%)
 Frame = -3

Query: 254 SRNMCTVTAPELNHLISAYTNDNNVKQARRLLDENPSSRNIVSWNMIMTAYVQRHQMGLA 75
           SR++ T++   LN LI+ Y    N++ AR+L D+NP+SRN V WN I++AY+Q  +   A
Sbjct: 12  SRHIYTLSTANLNRLINGYIRKGNLRDARKLFDQNPTSRNTVIWNTIISAYIQNDEPHNA 71

Query: 74  RDLFDQMPLKDAVSWNIMLSGFHR 3
           ++LFD+MP +D VSWN  LSG  +
Sbjct: 72  QNLFDEMPDRDIVSWNTALSGLKK 95


>ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 763

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 33/70 (47%), Positives = 53/70 (75%)
 Frame = -3

Query: 218 NHLISAYTNDNNVKQARRLLDENPSSRNIVSWNMIMTAYVQRHQMGLARDLFDQMPLKDA 39
           N L++AY ++  +K+ARRL  E+ S+  ++SWN +M  YV+R+ +G AR LFD+MP++D 
Sbjct: 174 NGLLAAYVHNGRLKEARRLF-ESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDV 232

Query: 38  VSWNIMLSGF 9
           +SWN M+SG+
Sbjct: 233 ISWNTMISGY 242



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 33/70 (47%), Positives = 45/70 (64%)
 Frame = -3

Query: 218 NHLISAYTNDNNVKQARRLLDENPSSRNIVSWNMIMTAYVQRHQMGLARDLFDQMPLKDA 39
           N +IS Y  +     AR L D+ P  R++ SWN+++T YV+  ++G A  LFD MP KD 
Sbjct: 81  NAMISGYLRNAKFSLARDLFDKMPE-RDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDV 139

Query: 38  VSWNIMLSGF 9
           VSWN MLSG+
Sbjct: 140 VSWNAMLSGY 149



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 36/99 (36%), Positives = 59/99 (59%)
 Frame = -3

Query: 305 KREMHGVKRLLLLRTPCSRNMCTVTAPELNHLISAYTNDNNVKQARRLLDENPSSRNIVS 126
           KR M G  R L  R P  R++ +      N +IS Y    ++ QA+RL +E+P  R++ +
Sbjct: 213 KRNMLGDARQLFDRMPV-RDVIS-----WNTMISGYAQVGDLSQAKRLFNESPI-RDVFT 265

Query: 125 WNMIMTAYVQRHQMGLARDLFDQMPLKDAVSWNIMLSGF 9
           W  +++ YVQ   +  AR  FD+MP+K+ +S+N ML+G+
Sbjct: 266 WTAMVSGYVQNGMVDEARKYFDEMPVKNEISYNAMLAGY 304



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/72 (38%), Positives = 47/72 (65%)
 Frame = -3

Query: 218 NHLISAYTNDNNVKQARRLLDENPSSRNIVSWNMIMTAYVQRHQMGLARDLFDQMPLKDA 39
           N  IS++  + +   A R+ +  P  R+ VS+N +++ Y++  +  LARDLFD+MP +D 
Sbjct: 50  NKAISSHMRNGHCDSALRVFNSMPR-RSSVSYNAMISGYLRNAKFSLARDLFDKMPERDL 108

Query: 38  VSWNIMLSGFHR 3
            SWN+ML+G+ R
Sbjct: 109 FSWNVMLTGYVR 120



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 25/68 (36%), Positives = 44/68 (64%)
 Frame = -3

Query: 212 LISAYTNDNNVKQARRLLDENPSSRNIVSWNMIMTAYVQRHQMGLARDLFDQMPLKDAVS 33
           ++S Y  +  V +AR+  DE P  +N +S+N ++  YVQ  +M +A +LF+ MP ++  S
Sbjct: 269 MVSGYVQNGMVDEARKYFDEMPV-KNEISYNAMLAGYVQYKKMVIAGELFEAMPCRNISS 327

Query: 32  WNIMLSGF 9
           WN M++G+
Sbjct: 328 WNTMITGY 335



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/70 (34%), Positives = 42/70 (60%)
 Frame = -3

Query: 218 NHLISAYTNDNNVKQARRLLDENPSSRNIVSWNMIMTAYVQRHQMGLARDLFDQMPLKDA 39
           N L+  Y   N +  AR+L D  P  R+++SWN +++ Y Q   +  A+ LF++ P++D 
Sbjct: 205 NCLMGGYVKRNMLGDARQLFDRMPV-RDVISWNTMISGYAQVGDLSQAKRLFNESPIRDV 263

Query: 38  VSWNIMLSGF 9
            +W  M+SG+
Sbjct: 264 FTWTAMVSGY 273


>emb|CBI40215.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 32/70 (45%), Positives = 50/70 (71%)
 Frame = -3

Query: 218 NHLISAYTNDNNVKQARRLLDENPSSRNIVSWNMIMTAYVQRHQMGLARDLFDQMPLKDA 39
           N +IS Y  + ++K AR+L DE P  +N+ SWN ++T Y   ++M  AR+LFDQMP +++
Sbjct: 136 NAMISGYVQNGDLKNARKLFDEMPE-KNVASWNSVVTGYCHCYRMSEARELFDQMPERNS 194

Query: 38  VSWNIMLSGF 9
           VSW +M+SG+
Sbjct: 195 VSWMVMISGY 204



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 26/68 (38%), Positives = 46/68 (67%)
 Frame = -3

Query: 212 LISAYTNDNNVKQARRLLDENPSSRNIVSWNMIMTAYVQRHQMGLARDLFDQMPLKDAVS 33
           L++ Y  +  +++AR +  E+ + RN+VSWN +++ YVQ   +  AR LFD+MP K+  S
Sbjct: 107 LLTGYAKEGRIEEAREVF-ESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVAS 165

Query: 32  WNIMLSGF 9
           WN +++G+
Sbjct: 166 WNSVVTGY 173


>ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 1058

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 32/70 (45%), Positives = 50/70 (71%)
 Frame = -3

Query: 218 NHLISAYTNDNNVKQARRLLDENPSSRNIVSWNMIMTAYVQRHQMGLARDLFDQMPLKDA 39
           N +IS Y  + ++K AR+L DE P  +N+ SWN ++T Y   ++M  AR+LFDQMP +++
Sbjct: 268 NAMISGYVQNGDLKNARKLFDEMPE-KNVASWNSVVTGYCHCYRMSEARELFDQMPERNS 326

Query: 38  VSWNIMLSGF 9
           VSW +M+SG+
Sbjct: 327 VSWMVMISGY 336



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 26/68 (38%), Positives = 46/68 (67%)
 Frame = -3

Query: 212 LISAYTNDNNVKQARRLLDENPSSRNIVSWNMIMTAYVQRHQMGLARDLFDQMPLKDAVS 33
           L++ Y  +  +++AR +  E+ + RN+VSWN +++ YVQ   +  AR LFD+MP K+  S
Sbjct: 239 LLTGYAKEGRIEEAREVF-ESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVAS 297

Query: 32  WNIMLSGF 9
           WN +++G+
Sbjct: 298 WNSVVTGY 305



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/70 (38%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
 Frame = -3

Query: 212 LISAYTNDNNVKQARRLLDE--NPSSRNIVSWNMIMTAYVQRHQMGLARDLFDQMPLKDA 39
           +++AY     +++AR + DE  NP   N+V+WN I+  Y Q   +  A+DLF +MP+K++
Sbjct: 464 MMTAYAQVGRIQKARLIFDEILNP---NVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNS 520

Query: 38  VSWNIMLSGF 9
            SW  M++GF
Sbjct: 521 ASWAAMIAGF 530