BLASTX nr result

ID: Glycyrrhiza23_contig00026944 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026944
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549121.1| PREDICTED: F-box protein At4g00755-like [Gly...    83   2e-14
gb|AFK42252.1| unknown [Lotus japonicus]                               73   2e-11
ref|XP_003534016.1| PREDICTED: F-box protein At4g00755-like [Gly...    69   4e-10

>ref|XP_003549121.1| PREDICTED: F-box protein At4g00755-like [Glycine max]
          Length = 372

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 41/59 (69%), Positives = 48/59 (81%), Gaps = 1/59 (1%)
 Frame = +2

Query: 2   YCPQTDSGMCS-TSSPGRDSSNPSRLRSLTSGLMQRGVRHWEQIILGALLGSGAAVVDD 175
           YCPQTD  M S TSSP  +SSNPSRLR++TS +MQRGVR WEQ +LGALLG+G  VVD+
Sbjct: 311 YCPQTDCYMSSPTSSPRSNSSNPSRLRTITSSIMQRGVRRWEQFLLGALLGTGPVVVDN 369


>gb|AFK42252.1| unknown [Lotus japonicus]
          Length = 304

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 40/58 (68%), Positives = 44/58 (75%)
 Frame = +2

Query: 2   YCPQTDSGMCSTSSPGRDSSNPSRLRSLTSGLMQRGVRHWEQIILGALLGSGAAVVDD 175
           Y PQTD  + STSSP  +S+NPSRLRSL    MQ GVR WEQIILGALLGSG+  VDD
Sbjct: 251 YFPQTDWCVPSTSSPTIESNNPSRLRSL----MQSGVRRWEQIILGALLGSGSVAVDD 304


>ref|XP_003534016.1| PREDICTED: F-box protein At4g00755-like [Glycine max]
          Length = 374

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/61 (60%), Positives = 44/61 (72%), Gaps = 3/61 (4%)
 Frame = +2

Query: 2   YCPQTDSGMCS-TSSPGRDSSNPSRLRSLTSGLMQRGVRHWEQIILGALLGSGA--AVVD 172
           YCPQ D  + S TSS   DSSNPSRLR++TS +MQRGVR WEQ +L ALLG+     VVD
Sbjct: 311 YCPQIDCYVSSSTSSQRSDSSNPSRLRTITSNIMQRGVRRWEQFLLSALLGTATDPVVVD 370

Query: 173 D 175
           +
Sbjct: 371 N 371


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