BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026934
         (879 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637396.1| General transcription factor IIH subunit [Me...   529   e-148
ref|XP_003601071.1| General transcription factor IIH subunit [Me...   524   e-147
ref|XP_003529318.1| PREDICTED: general transcription factor IIH ...   517   e-144
ref|XP_003542754.1| PREDICTED: general transcription factor IIH ...   507   e-141
ref|XP_004167674.1| PREDICTED: RNA polymerase II transcription f...   463   e-128

>ref|XP_003637396.1| General transcription factor IIH subunit [Medicago truncatula]
           gi|355503331|gb|AES84534.1| General transcription factor
           IIH subunit [Medicago truncatula]
          Length = 451

 Score =  529 bits (1363), Expect = e-148
 Identities = 264/286 (92%), Positives = 275/286 (96%)
 Frame = -2

Query: 860 MPEVRIVAKNFMDMVASMPAMKLDKLYENGFICEAILRSLPPLAKKYVLQLLHIDGPVSA 681
           MPEVRI+AKNFMDMVASMP +KLDKLYENGFICEAILRSLPPLAKKYVLQL HIDGPV A
Sbjct: 1   MPEVRIIAKNFMDMVASMPTIKLDKLYENGFICEAILRSLPPLAKKYVLQLFHIDGPVPA 60

Query: 680 KLLEEWVLPDGLSKHRVAIDRLVQLRVFVEAVDRKNDKTYKVNPTFQRSLQKLLIHGGTL 501
           KLL EWVLPDGLSKH+VAIDRLVQL VFVEA+D KN KTYKVNPT+QRSLQKLL+HGGTL
Sbjct: 61  KLLAEWVLPDGLSKHKVAIDRLVQLGVFVEALDSKNGKTYKVNPTYQRSLQKLLVHGGTL 120

Query: 500 PRESMPSNITVRLPTLEDLETYALEQWECFLLQLISPSHVEKPLNLSSSLMKVFQRRLLS 321
           PRESMPSNITVRLPTLEDLETYALEQWECFLLQLISPSHV+K LN+SSSLMKVFQRRLLS
Sbjct: 121 PRESMPSNITVRLPTLEDLETYALEQWECFLLQLISPSHVDKTLNISSSLMKVFQRRLLS 180

Query: 320 HRDKEGPKLTESGFQFLLMDTNAQLWYIIREYISNSEERGVDAGDLISFMLELSFHVIGE 141
            RD+E PKLTESGFQFLLMDTNAQLWYIIREYI+NSEERGVDAGDLISFMLELSFHVIGE
Sbjct: 181 QRDREAPKLTESGFQFLLMDTNAQLWYIIREYITNSEERGVDAGDLISFMLELSFHVIGE 240

Query: 140 AYNTNTLTDFQRNIIKDLADLGLVKLQQGRKESWFIPTKLATNLSV 3
           AYN NTLT+FQRNIIKDLADLGLVKLQQGRKESWFIPTKLATNLSV
Sbjct: 241 AYNINTLTEFQRNIIKDLADLGLVKLQQGRKESWFIPTKLATNLSV 286


>ref|XP_003601071.1| General transcription factor IIH subunit [Medicago truncatula]
           gi|355490119|gb|AES71322.1| General transcription factor
           IIH subunit [Medicago truncatula]
          Length = 452

 Score =  524 bits (1350), Expect = e-147
 Identities = 263/287 (91%), Positives = 277/287 (96%), Gaps = 1/287 (0%)
 Frame = -2

Query: 860 MPEVRIVAKNFMDMVASMPAMKLDKLYENGFICEAILRSLPPLAKKYVLQLLHIDGPVSA 681
           MPEVRI+AKNFMDMVASMPA+KLDKLY+NGFICEAILRSLPPLAKKYVLQLLHIDGPV A
Sbjct: 1   MPEVRIIAKNFMDMVASMPAIKLDKLYQNGFICEAILRSLPPLAKKYVLQLLHIDGPVPA 60

Query: 680 KLLEEWVLPDGLSKHRVAIDRLVQLRVFVEAVD-RKNDKTYKVNPTFQRSLQKLLIHGGT 504
           KLL EWVLPDGLSKH+VAIDRLVQLRVFVEA D RKN+KTY+VN T+Q+SLQ LL+HGGT
Sbjct: 61  KLLAEWVLPDGLSKHKVAIDRLVQLRVFVEAFDNRKNEKTYQVNSTYQKSLQNLLVHGGT 120

Query: 503 LPRESMPSNITVRLPTLEDLETYALEQWECFLLQLISPSHVEKPLNLSSSLMKVFQRRLL 324
           LPRESMPSNITVRLPTLEDLETYALEQWECFLLQLISPSHV+K LN+SSSLMKVFQRRLL
Sbjct: 121 LPRESMPSNITVRLPTLEDLETYALEQWECFLLQLISPSHVDKTLNISSSLMKVFQRRLL 180

Query: 323 SHRDKEGPKLTESGFQFLLMDTNAQLWYIIREYISNSEERGVDAGDLISFMLELSFHVIG 144
           S RD+E PKLTESGFQFLLMDTNAQLWYIIREYI+NSEERGVDAGDLISFMLELSFHVIG
Sbjct: 181 SQRDREAPKLTESGFQFLLMDTNAQLWYIIREYITNSEERGVDAGDLISFMLELSFHVIG 240

Query: 143 EAYNTNTLTDFQRNIIKDLADLGLVKLQQGRKESWFIPTKLATNLSV 3
           EAYN NTLT+FQRNIIKDLADLGLVKLQQGRKESWFIPTKLATNLSV
Sbjct: 241 EAYNINTLTEFQRNIIKDLADLGLVKLQQGRKESWFIPTKLATNLSV 287


>ref|XP_003529318.1| PREDICTED: general transcription factor IIH subunit 4-like [Glycine
           max]
          Length = 451

 Score =  517 bits (1332), Expect = e-144
 Identities = 257/286 (89%), Positives = 274/286 (95%)
 Frame = -2

Query: 860 MPEVRIVAKNFMDMVASMPAMKLDKLYENGFICEAILRSLPPLAKKYVLQLLHIDGPVSA 681
           MPEVRI+AKNFMDMVASMPAMKLDKLYENGFICEAILRS+PPLAKKYV+Q+LHID PV+A
Sbjct: 1   MPEVRIIAKNFMDMVASMPAMKLDKLYENGFICEAILRSVPPLAKKYVIQMLHIDVPVAA 60

Query: 680 KLLEEWVLPDGLSKHRVAIDRLVQLRVFVEAVDRKNDKTYKVNPTFQRSLQKLLIHGGTL 501
           KLLEEWVLP G+SKHRVAIDRLVQLRVF+EAVDRKN+KTYKVNPTFQRSLQKLL+ GGTL
Sbjct: 61  KLLEEWVLPAGVSKHRVAIDRLVQLRVFLEAVDRKNEKTYKVNPTFQRSLQKLLVQGGTL 120

Query: 500 PRESMPSNITVRLPTLEDLETYALEQWECFLLQLISPSHVEKPLNLSSSLMKVFQRRLLS 321
           PRESMPSNITVRLPTLE+LE YALEQWECFLLQLISPS VEKPLN+SSSLMKVFQRR+LS
Sbjct: 121 PRESMPSNITVRLPTLENLEAYALEQWECFLLQLISPSQVEKPLNISSSLMKVFQRRILS 180

Query: 320 HRDKEGPKLTESGFQFLLMDTNAQLWYIIREYISNSEERGVDAGDLISFMLELSFHVIGE 141
           HRDKE PKLTESGFQFLLMDTNAQLWYIIREYISNSE+RGVDA DLISFMLELSFHVIGE
Sbjct: 181 HRDKEAPKLTESGFQFLLMDTNAQLWYIIREYISNSEDRGVDAADLISFMLELSFHVIGE 240

Query: 140 AYNTNTLTDFQRNIIKDLADLGLVKLQQGRKESWFIPTKLATNLSV 3
           AY+ +TLT FQR II DLADLGLVK+QQGRK SWFIPTKLATNLS+
Sbjct: 241 AYSVDTLTSFQRTIINDLADLGLVKIQQGRKGSWFIPTKLATNLSM 286


>ref|XP_003542754.1| PREDICTED: general transcription factor IIH subunit 4-like [Glycine
           max]
          Length = 451

 Score =  507 bits (1305), Expect = e-141
 Identities = 254/286 (88%), Positives = 271/286 (94%)
 Frame = -2

Query: 860 MPEVRIVAKNFMDMVASMPAMKLDKLYENGFICEAILRSLPPLAKKYVLQLLHIDGPVSA 681
           MPEVRI+AKNFMDMVASMPAMKLDKLYENGFICEAILRSL PLAKKYV+Q+LHID  V+A
Sbjct: 1   MPEVRIIAKNFMDMVASMPAMKLDKLYENGFICEAILRSLLPLAKKYVIQMLHIDVSVAA 60

Query: 680 KLLEEWVLPDGLSKHRVAIDRLVQLRVFVEAVDRKNDKTYKVNPTFQRSLQKLLIHGGTL 501
           KLLEEWVLP G+SKHRVAIDRLVQLRVF+EAVDRKN+KTYKVNPTFQRSLQKLL+ GGTL
Sbjct: 61  KLLEEWVLPGGVSKHRVAIDRLVQLRVFLEAVDRKNEKTYKVNPTFQRSLQKLLVQGGTL 120

Query: 500 PRESMPSNITVRLPTLEDLETYALEQWECFLLQLISPSHVEKPLNLSSSLMKVFQRRLLS 321
           PRESMPSNITVRLPTLE+LE YALEQWECFLLQLISPS VEKPLN+SSSLMKVFQRR+LS
Sbjct: 121 PRESMPSNITVRLPTLENLEAYALEQWECFLLQLISPSQVEKPLNISSSLMKVFQRRILS 180

Query: 320 HRDKEGPKLTESGFQFLLMDTNAQLWYIIREYISNSEERGVDAGDLISFMLELSFHVIGE 141
           +RDKE PKLTESGFQFLLMDTNAQLWYIIREYISNSE+RGVDA DLISFMLELSFH IGE
Sbjct: 181 YRDKEAPKLTESGFQFLLMDTNAQLWYIIREYISNSEDRGVDAADLISFMLELSFHDIGE 240

Query: 140 AYNTNTLTDFQRNIIKDLADLGLVKLQQGRKESWFIPTKLATNLSV 3
           AY+ +TLT FQR II DLADLGLVK+QQGRK SWFIPTKLATNLS+
Sbjct: 241 AYSVDTLTSFQRTIINDLADLGLVKIQQGRKGSWFIPTKLATNLSM 286


>ref|XP_004167674.1| PREDICTED: RNA polymerase II transcription factor B subunit 2-like,
           partial [Cucumis sativus]
          Length = 296

 Score =  463 bits (1192), Expect = e-128
 Identities = 226/286 (79%), Positives = 259/286 (90%)
 Frame = -2

Query: 860 MPEVRIVAKNFMDMVASMPAMKLDKLYENGFICEAILRSLPPLAKKYVLQLLHIDGPVSA 681
           MP+V+I+AKNFMDMVAS+PAMKLD+LYEN FICEAILRSLPPLAKK+VLQ+L+IDGPVSA
Sbjct: 1   MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGPVSA 60

Query: 680 KLLEEWVLPDGLSKHRVAIDRLVQLRVFVEAVDRKNDKTYKVNPTFQRSLQKLLIHGGTL 501
           K +EEWVLPDG+SK++VA+DRL+QLRVF+E  DRK + TY++NPTFQ +LQKLLIHG  L
Sbjct: 61  KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIHGEVL 120

Query: 500 PRESMPSNITVRLPTLEDLETYALEQWECFLLQLISPSHVEKPLNLSSSLMKVFQRRLLS 321
            RE MPSNITVRLP+LEDLE YAL+QWECFLLQLI+    EKP N+SSS+MKVFQ+ LLS
Sbjct: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLS 180

Query: 320 HRDKEGPKLTESGFQFLLMDTNAQLWYIIREYISNSEERGVDAGDLISFMLELSFHVIGE 141
            RDKE P+LTESGFQFLLM+TNAQLWYIIREYISN+EERGVD  DLISF+LELSFHV GE
Sbjct: 181 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE 240

Query: 140 AYNTNTLTDFQRNIIKDLADLGLVKLQQGRKESWFIPTKLATNLSV 3
           AY+ +TL+D QR  IKDLADLGLVKLQQGRKESWFIPTKLATNLS+
Sbjct: 241 AYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSM 286