BLASTX nr result
ID: Glycyrrhiza23_contig00026910
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00026910 (458 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003630442.1| F-box/FBD/LRR-repeat protein [Medicago trunc... 89 3e-16 ref|XP_003613588.1| F-box/FBD/LRR-repeat protein [Medicago trunc... 82 6e-14 gb|AFK36982.1| unknown [Medicago truncatula] 80 2e-13 ref|XP_003531174.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g... 75 5e-12 gb|ABD33321.1| Cyclin-like F-box; FBD [Medicago truncatula] 74 1e-11 >ref|XP_003630442.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] gi|355524464|gb|AET04918.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] Length = 380 Score = 89.4 bits (220), Expect = 3e-16 Identities = 43/71 (60%), Positives = 53/71 (74%) Frame = -3 Query: 246 VNGILEHLHIVDRVRTGILSRKWRYMWASVPQLEFEEIFFEKYAHLGDIAIFSIITDVLL 67 ++GILEHL+ D VRT +LSRKWRYMW +VP+LEF + FF KY L + + IIT+VL Sbjct: 25 IDGILEHLNARDLVRTSVLSRKWRYMWITVPRLEFCQDFFCKYKDLEALDVSRIITEVLF 84 Query: 66 LFNGPIYKFTL 34 L NGPIYKF L Sbjct: 85 LHNGPIYKFIL 95 >ref|XP_003613588.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] gi|355514923|gb|AES96546.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] Length = 499 Score = 81.6 bits (200), Expect = 6e-14 Identities = 51/105 (48%), Positives = 64/105 (60%), Gaps = 13/105 (12%) Frame = -3 Query: 300 LMTRSNKKA-------AMVITSIK*VNGILEHLHIVDRVRTGILSRKWRYMWASVPQLEF 142 LMT SNKKA + ++GIL+HL+I D RT ILSRKWR +W S P LEF Sbjct: 81 LMTLSNKKANYGDHLDRISDLPSNVIDGILQHLNIRDLARTSILSRKWRDIWISFPWLEF 140 Query: 141 EEIFFEKY------AHLGDIAIFSIITDVLLLFNGPIYKFTLEVP 25 ++ FF+ Y H ++ I IIT+VLLL NGPI KFTL +P Sbjct: 141 DKDFFDLYDLKDFKDHSPEVCI--IITEVLLLHNGPINKFTLFIP 183 >gb|AFK36982.1| unknown [Medicago truncatula] Length = 418 Score = 80.1 bits (196), Expect = 2e-13 Identities = 50/104 (48%), Positives = 63/104 (60%), Gaps = 13/104 (12%) Frame = -3 Query: 297 MTRSNKKA-------AMVITSIK*VNGILEHLHIVDRVRTGILSRKWRYMWASVPQLEFE 139 MT SNKKA + ++GIL+HL+I D RT ILSRKWR +W S P LEF+ Sbjct: 1 MTLSNKKANYGDHLDRISDLPSNVIDGILQHLNIRDLARTSILSRKWRDIWISFPWLEFD 60 Query: 138 EIFFEKY------AHLGDIAIFSIITDVLLLFNGPIYKFTLEVP 25 + FF+ Y H ++ I IIT+VLLL NGPI KFTL +P Sbjct: 61 KDFFDLYDLKDFKDHSPEVCI--IITEVLLLHNGPINKFTLFIP 102 >ref|XP_003531174.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Glycine max] Length = 128 Score = 75.1 bits (183), Expect = 5e-12 Identities = 37/79 (46%), Positives = 50/79 (63%) Frame = -3 Query: 237 ILEHLHIVDRVRTGILSRKWRYMWASVPQLEFEEIFFEKYAHLGDIAIFSIITDVLLLFN 58 IL+ L D V+T +L+R WRYMW+S P+ EF + FFEK HLG + +IIT+ LLL Sbjct: 23 ILQRLPFQDLVKTSVLARAWRYMWSSTPRREFRDDFFEKCNHLGYLETSAIITEALLLHT 82 Query: 57 GPIYKFTLEVPLERRIGIE 1 GPI+ F + P I +E Sbjct: 83 GPIHVFAVIPPPHYPIKLE 101 >gb|ABD33321.1| Cyclin-like F-box; FBD [Medicago truncatula] Length = 430 Score = 73.9 bits (180), Expect = 1e-11 Identities = 38/74 (51%), Positives = 47/74 (63%), Gaps = 3/74 (4%) Frame = -3 Query: 246 VNGILEHLHIVDRVRTGILSRKWRYMWASVPQLEFEEIFFEKYAHLGDI---AIFSIITD 76 ++GIL HL I D V T ILS++WRY W P+L F E FFE+Y L D+ + IITD Sbjct: 21 IDGILSHLDIKDLVGTSILSKQWRYKWTKAPRLWFSEDFFEEYEDLEDLEDPVTYRIITD 80 Query: 75 VLLLFNGPIYKFTL 34 VL+ GPI KF L Sbjct: 81 VLMQHQGPIDKFGL 94