BLASTX nr result

ID: Glycyrrhiza23_contig00026884 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026884
         (836 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544406.1| PREDICTED: tubby-like F-box protein 5-like [...   247   2e-63
ref|XP_003550385.1| PREDICTED: tubby-like F-box protein 5-like [...   243   3e-62
ref|XP_002300764.1| f-box family protein [Populus trichocarpa] g...   233   5e-59
ref|XP_002282152.1| PREDICTED: tubby-like F-box protein 5 isofor...   232   7e-59
ref|XP_002307662.1| f-box family protein [Populus trichocarpa] g...   227   2e-57

>ref|XP_003544406.1| PREDICTED: tubby-like F-box protein 5-like [Glycine max]
          Length = 423

 Score =  247 bits (631), Expect = 2e-63
 Identities = 130/154 (84%), Positives = 136/154 (88%), Gaps = 2/154 (1%)
 Frame = +3

Query: 3   AIQEGGTAPTPFKFTNCHNEHAST-MSISKGKKPEV-DFGLTGSGNSSTPPEESTTCARE 176
           AIQEGG APTP KFTN  N++AST +  +KGKKPEV +F  TG+ N  TP  ES   ARE
Sbjct: 274 AIQEGGNAPTPLKFTNYLNDYASTTIPDTKGKKPEVVEFDSTGTDN--TP--ESIQRARE 329

Query: 177 PLILKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAAEPCQNVSAAEQEKVILQFGK 356
           PLILKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAAEPCQNVSAAEQEKVILQFGK
Sbjct: 330 PLILKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAAEPCQNVSAAEQEKVILQFGK 389

Query: 357 IGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE 458
           IGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE
Sbjct: 390 IGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE 423


>ref|XP_003550385.1| PREDICTED: tubby-like F-box protein 5-like [Glycine max]
          Length = 436

 Score =  243 bits (621), Expect = 3e-62
 Identities = 131/162 (80%), Positives = 136/162 (83%), Gaps = 10/162 (6%)
 Frame = +3

Query: 3   AIQEGGTAPTPFKFT-NCHNEHASTMSI--------SKGKKPEV-DFGLTGSGNSSTPPE 152
           AIQEGG APTP KFT N  N+HAST +         SKGKKPEV +F  TG+ N  TP  
Sbjct: 279 AIQEGGNAPTPLKFTTNYLNDHASTTTEHASTTTPDSKGKKPEVVEFDSTGTAN--TP-- 334

Query: 153 ESTTCAREPLILKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAAEPCQNVSAAEQE 332
           ES   AREPL+LKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAAEPCQNVSAAEQE
Sbjct: 335 ESIQRAREPLVLKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAAEPCQNVSAAEQE 394

Query: 333 KVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE 458
           KVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE
Sbjct: 395 KVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE 436


>ref|XP_002300764.1| f-box family protein [Populus trichocarpa]
           gi|222842490|gb|EEE80037.1| f-box family protein
           [Populus trichocarpa]
          Length = 416

 Score =  233 bits (593), Expect = 5e-59
 Identities = 116/152 (76%), Positives = 123/152 (80%)
 Frame = +3

Query: 3   AIQEGGTAPTPFKFTNCHNEHASTMSISKGKKPEVDFGLTGSGNSSTPPEESTTCAREPL 182
           AIQEGG APTP +F N  NE +S +S SK K+P +DF    S NS     +S     +PL
Sbjct: 269 AIQEGGIAPTPSEFNNPSNEQSSPLSASKLKQPPIDF----SSNSLAESSDSLCSKNDPL 324

Query: 183 ILKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAAEPCQNVSAAEQEKVILQFGKIG 362
           ILKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAA EPCQNV   EQEKVILQFGKIG
Sbjct: 325 ILKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAVEPCQNVPVEEQEKVILQFGKIG 384

Query: 363 KDIFTMDYRYPLSAFQAFAICLSSFDTKPACE 458
           KDIFTMDYRYPLSAFQAFAICLSSFDTKPACE
Sbjct: 385 KDIFTMDYRYPLSAFQAFAICLSSFDTKPACE 416


>ref|XP_002282152.1| PREDICTED: tubby-like F-box protein 5 isoform 1 [Vitis vinifera]
          Length = 416

 Score =  232 bits (592), Expect = 7e-59
 Identities = 115/152 (75%), Positives = 120/152 (78%)
 Frame = +3

Query: 3   AIQEGGTAPTPFKFTNCHNEHASTMSISKGKKPEVDFGLTGSGNSSTPPEESTTCAREPL 182
           AIQEGGTAPTP  F  C  +     +  KGK P ++F    S NS     ES    R PL
Sbjct: 269 AIQEGGTAPTPMTFAKCQKDQFPQSADPKGKNPLIEF----SSNSLAETPESIQDTRNPL 324

Query: 183 ILKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAAEPCQNVSAAEQEKVILQFGKIG 362
           +LKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAA EPCQNVS AEQEKVILQFGKIG
Sbjct: 325 VLKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAVEPCQNVSVAEQEKVILQFGKIG 384

Query: 363 KDIFTMDYRYPLSAFQAFAICLSSFDTKPACE 458
           KDIFTMDYRYPLSAFQAFAICLSSFDTKPACE
Sbjct: 385 KDIFTMDYRYPLSAFQAFAICLSSFDTKPACE 416


>ref|XP_002307662.1| f-box family protein [Populus trichocarpa]
           gi|222857111|gb|EEE94658.1| f-box family protein
           [Populus trichocarpa]
          Length = 416

 Score =  227 bits (579), Expect = 2e-57
 Identities = 113/152 (74%), Positives = 123/152 (80%)
 Frame = +3

Query: 3   AIQEGGTAPTPFKFTNCHNEHASTMSISKGKKPEVDFGLTGSGNSSTPPEESTTCAREPL 182
           AIQEGG APTP +F N  +E + ++S SK K+P +DF  T    SS    +S     +PL
Sbjct: 269 AIQEGGVAPTPLEFNNPGDEQSPSLSASKIKQPLIDFISTSRAESS----DSICSKMDPL 324

Query: 183 ILKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAAEPCQNVSAAEQEKVILQFGKIG 362
           +LKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAA EPCQNV   EQEKVILQFGKIG
Sbjct: 325 VLKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAVEPCQNVPVEEQEKVILQFGKIG 384

Query: 363 KDIFTMDYRYPLSAFQAFAICLSSFDTKPACE 458
           KDIFTMDYRYPLSAFQAFAICLSSFDTKPACE
Sbjct: 385 KDIFTMDYRYPLSAFQAFAICLSSFDTKPACE 416


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