BLASTX nr result

ID: Glycyrrhiza23_contig00026881 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026881
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotei...   159   2e-37
ref|XP_002894630.1| EMB3012 [Arabidopsis lyrata subsp. lyrata] g...   134   1e-29
ref|XP_002870701.1| EMB3012 [Arabidopsis lyrata subsp. lyrata] g...   134   1e-29
dbj|BAB10497.1| nuclear pore protein-like [Arabidopsis thaliana]      133   2e-29
ref|NP_198864.2| protein embryo defective 3012 [Arabidopsis thal...   133   2e-29

>ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Glycine
           max]
          Length = 2304

 Score =  159 bits (403), Expect = 2e-37
 Identities = 79/96 (82%), Positives = 82/96 (85%)
 Frame = -2

Query: 289 WLXXXXXXXXXXXSGIVQAQNPGKATIRVLSAYDSLNYDEVLVEVSIPSSMVMLHNFPVE 110
           WL            G+VQA+ PGKATI+VLS YDSLNYDEVLVEVSIPSSMVMLHNFPVE
Sbjct: 501 WLSSDLSTVSVSAFGVVQAKKPGKATIKVLSVYDSLNYDEVLVEVSIPSSMVMLHNFPVE 560

Query: 109 TVVGSHLQAAVTMKAANGAFFYRCDAFNSLIKWKAG 2
           TVVGSHLQAAVTMKAANGAFFYRCDAFNSLIKWKAG
Sbjct: 561 TVVGSHLQAAVTMKAANGAFFYRCDAFNSLIKWKAG 596


>ref|XP_002894630.1| EMB3012 [Arabidopsis lyrata subsp. lyrata]
           gi|297340472|gb|EFH70889.1| EMB3012 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1722

 Score =  134 bits (336), Expect = 1e-29
 Identities = 64/82 (78%), Positives = 74/82 (90%)
 Frame = -2

Query: 247 GIVQAQNPGKATIRVLSAYDSLNYDEVLVEVSIPSSMVMLHNFPVETVVGSHLQAAVTMK 68
           GI+QA+ PG AT++V+S +DS N+DEV+VEVSIPSSMVML NFPVETVVGSHL+AAVTMK
Sbjct: 520 GIIQAKRPGIATVKVVSTFDSQNFDEVIVEVSIPSSMVMLQNFPVETVVGSHLKAAVTMK 579

Query: 67  AANGAFFYRCDAFNSLIKWKAG 2
           A+NGA F RCDAFNSLIKWK G
Sbjct: 580 ASNGASFSRCDAFNSLIKWKTG 601


>ref|XP_002870701.1| EMB3012 [Arabidopsis lyrata subsp. lyrata]
           gi|297316537|gb|EFH46960.1| EMB3012 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1918

 Score =  134 bits (336), Expect = 1e-29
 Identities = 64/82 (78%), Positives = 73/82 (89%)
 Frame = -2

Query: 247 GIVQAQNPGKATIRVLSAYDSLNYDEVLVEVSIPSSMVMLHNFPVETVVGSHLQAAVTMK 68
           GI+QA+ PG AT++V+S +DS N+DEV+VEVSIPSSMVML NFPVETVVGSHL+AAVTMK
Sbjct: 520 GIIQAKRPGIATVKVVSTFDSQNFDEVIVEVSIPSSMVMLQNFPVETVVGSHLKAAVTMK 579

Query: 67  AANGAFFYRCDAFNSLIKWKAG 2
           A NGA F RCDAFNSLIKWK G
Sbjct: 580 ALNGALFSRCDAFNSLIKWKTG 601


>dbj|BAB10497.1| nuclear pore protein-like [Arabidopsis thaliana]
          Length = 1962

 Score =  133 bits (334), Expect = 2e-29
 Identities = 64/82 (78%), Positives = 73/82 (89%)
 Frame = -2

Query: 247 GIVQAQNPGKATIRVLSAYDSLNYDEVLVEVSIPSSMVMLHNFPVETVVGSHLQAAVTMK 68
           GI+QA+ PG AT++V+S +DS N+DEV+VEVSIPSSMVML NFPVETVVGSHL+AAVTMK
Sbjct: 520 GIIQAKRPGIATVKVVSTFDSQNFDEVIVEVSIPSSMVMLQNFPVETVVGSHLKAAVTMK 579

Query: 67  AANGAFFYRCDAFNSLIKWKAG 2
           A NGA F RCDAFNSLIKWK G
Sbjct: 580 ALNGATFSRCDAFNSLIKWKTG 601


>ref|NP_198864.2| protein embryo defective 3012 [Arabidopsis thaliana]
           gi|332007169|gb|AED94552.1| protein embryo defective
           3012 [Arabidopsis thaliana]
          Length = 1923

 Score =  133 bits (334), Expect = 2e-29
 Identities = 64/82 (78%), Positives = 73/82 (89%)
 Frame = -2

Query: 247 GIVQAQNPGKATIRVLSAYDSLNYDEVLVEVSIPSSMVMLHNFPVETVVGSHLQAAVTMK 68
           GI+QA+ PG AT++V+S +DS N+DEV+VEVSIPSSMVML NFPVETVVGSHL+AAVTMK
Sbjct: 520 GIIQAKRPGIATVKVVSTFDSQNFDEVIVEVSIPSSMVMLQNFPVETVVGSHLKAAVTMK 579

Query: 67  AANGAFFYRCDAFNSLIKWKAG 2
           A NGA F RCDAFNSLIKWK G
Sbjct: 580 ALNGATFSRCDAFNSLIKWKTG 601


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