BLASTX nr result
ID: Glycyrrhiza23_contig00026881
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00026881 (290 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotei... 159 2e-37 ref|XP_002894630.1| EMB3012 [Arabidopsis lyrata subsp. lyrata] g... 134 1e-29 ref|XP_002870701.1| EMB3012 [Arabidopsis lyrata subsp. lyrata] g... 134 1e-29 dbj|BAB10497.1| nuclear pore protein-like [Arabidopsis thaliana] 133 2e-29 ref|NP_198864.2| protein embryo defective 3012 [Arabidopsis thal... 133 2e-29 >ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Glycine max] Length = 2304 Score = 159 bits (403), Expect = 2e-37 Identities = 79/96 (82%), Positives = 82/96 (85%) Frame = -2 Query: 289 WLXXXXXXXXXXXSGIVQAQNPGKATIRVLSAYDSLNYDEVLVEVSIPSSMVMLHNFPVE 110 WL G+VQA+ PGKATI+VLS YDSLNYDEVLVEVSIPSSMVMLHNFPVE Sbjct: 501 WLSSDLSTVSVSAFGVVQAKKPGKATIKVLSVYDSLNYDEVLVEVSIPSSMVMLHNFPVE 560 Query: 109 TVVGSHLQAAVTMKAANGAFFYRCDAFNSLIKWKAG 2 TVVGSHLQAAVTMKAANGAFFYRCDAFNSLIKWKAG Sbjct: 561 TVVGSHLQAAVTMKAANGAFFYRCDAFNSLIKWKAG 596 >ref|XP_002894630.1| EMB3012 [Arabidopsis lyrata subsp. lyrata] gi|297340472|gb|EFH70889.1| EMB3012 [Arabidopsis lyrata subsp. lyrata] Length = 1722 Score = 134 bits (336), Expect = 1e-29 Identities = 64/82 (78%), Positives = 74/82 (90%) Frame = -2 Query: 247 GIVQAQNPGKATIRVLSAYDSLNYDEVLVEVSIPSSMVMLHNFPVETVVGSHLQAAVTMK 68 GI+QA+ PG AT++V+S +DS N+DEV+VEVSIPSSMVML NFPVETVVGSHL+AAVTMK Sbjct: 520 GIIQAKRPGIATVKVVSTFDSQNFDEVIVEVSIPSSMVMLQNFPVETVVGSHLKAAVTMK 579 Query: 67 AANGAFFYRCDAFNSLIKWKAG 2 A+NGA F RCDAFNSLIKWK G Sbjct: 580 ASNGASFSRCDAFNSLIKWKTG 601 >ref|XP_002870701.1| EMB3012 [Arabidopsis lyrata subsp. lyrata] gi|297316537|gb|EFH46960.1| EMB3012 [Arabidopsis lyrata subsp. lyrata] Length = 1918 Score = 134 bits (336), Expect = 1e-29 Identities = 64/82 (78%), Positives = 73/82 (89%) Frame = -2 Query: 247 GIVQAQNPGKATIRVLSAYDSLNYDEVLVEVSIPSSMVMLHNFPVETVVGSHLQAAVTMK 68 GI+QA+ PG AT++V+S +DS N+DEV+VEVSIPSSMVML NFPVETVVGSHL+AAVTMK Sbjct: 520 GIIQAKRPGIATVKVVSTFDSQNFDEVIVEVSIPSSMVMLQNFPVETVVGSHLKAAVTMK 579 Query: 67 AANGAFFYRCDAFNSLIKWKAG 2 A NGA F RCDAFNSLIKWK G Sbjct: 580 ALNGALFSRCDAFNSLIKWKTG 601 >dbj|BAB10497.1| nuclear pore protein-like [Arabidopsis thaliana] Length = 1962 Score = 133 bits (334), Expect = 2e-29 Identities = 64/82 (78%), Positives = 73/82 (89%) Frame = -2 Query: 247 GIVQAQNPGKATIRVLSAYDSLNYDEVLVEVSIPSSMVMLHNFPVETVVGSHLQAAVTMK 68 GI+QA+ PG AT++V+S +DS N+DEV+VEVSIPSSMVML NFPVETVVGSHL+AAVTMK Sbjct: 520 GIIQAKRPGIATVKVVSTFDSQNFDEVIVEVSIPSSMVMLQNFPVETVVGSHLKAAVTMK 579 Query: 67 AANGAFFYRCDAFNSLIKWKAG 2 A NGA F RCDAFNSLIKWK G Sbjct: 580 ALNGATFSRCDAFNSLIKWKTG 601 >ref|NP_198864.2| protein embryo defective 3012 [Arabidopsis thaliana] gi|332007169|gb|AED94552.1| protein embryo defective 3012 [Arabidopsis thaliana] Length = 1923 Score = 133 bits (334), Expect = 2e-29 Identities = 64/82 (78%), Positives = 73/82 (89%) Frame = -2 Query: 247 GIVQAQNPGKATIRVLSAYDSLNYDEVLVEVSIPSSMVMLHNFPVETVVGSHLQAAVTMK 68 GI+QA+ PG AT++V+S +DS N+DEV+VEVSIPSSMVML NFPVETVVGSHL+AAVTMK Sbjct: 520 GIIQAKRPGIATVKVVSTFDSQNFDEVIVEVSIPSSMVMLQNFPVETVVGSHLKAAVTMK 579 Query: 67 AANGAFFYRCDAFNSLIKWKAG 2 A NGA F RCDAFNSLIKWK G Sbjct: 580 ALNGATFSRCDAFNSLIKWKTG 601