BLASTX nr result

ID: Glycyrrhiza23_contig00026877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026877
         (210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602018.1| RING finger family protein [Medicago truncat...    59   5e-07
gb|AFK35856.1| unknown [Lotus japonicus]                               58   9e-07

>ref|XP_003602018.1| RING finger family protein [Medicago truncatula]
           gi|355491066|gb|AES72269.1| RING finger family protein
           [Medicago truncatula]
          Length = 157

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
 Frame = +2

Query: 11  LSKLFQELSGKXXXXXXXXXXXXXXXXWKLTSDTRPITTVEYLRFIEEKNPTICYTKE-Q 187
           +S +FQ+L  K                WKLTSDT+ ITT +Y++FIEEKNPTI Y K+  
Sbjct: 5   ISNVFQKLCNKIAILLIFVLVELIIFIWKLTSDTQSITTRQYIKFIEEKNPTIRYNKKLN 64

Query: 188 AHVECRV 208
           +H +C V
Sbjct: 65  SHGDCSV 71


>gb|AFK35856.1| unknown [Lotus japonicus]
          Length = 164

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 35/80 (43%), Positives = 42/80 (52%), Gaps = 11/80 (13%)
 Frame = +2

Query: 2   MRSLSKLFQELSGKXXXXXXXXXXXXXXXXWKLTSDTRPITTVEYLRFIEEKNPTICYTK 181
           M++L+KLFQ+L  K                W+LTS+ R ITT +YL FIEE NPTI Y K
Sbjct: 1   MKALTKLFQQLCSKIIILLTLLLVELIVLLWRLTSEKRSITTKQYLEFIEENNPTIRYAK 60

Query: 182 ------EQAHV-----ECRV 208
                 E  HV     ECRV
Sbjct: 61  RRSSWSELEHVVPDDTECRV 80


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