BLASTX nr result

ID: Glycyrrhiza23_contig00026876 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026876
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541362.1| PREDICTED: DNA repair and recombination prot...   245   2e-63
ref|XP_002529848.1| DNA repair and recombination protein RAD26, ...   210   1e-52
ref|XP_002307656.1| chromatin remodeling complex subunit [Populu...   208   3e-52
emb|CAN67815.1| hypothetical protein VITISV_002502 [Vitis vinifera]   208   3e-52
emb|CBI37137.3| unnamed protein product [Vitis vinifera]              207   7e-52

>ref|XP_003541362.1| PREDICTED: DNA repair and recombination protein RAD26-like [Glycine
            max]
          Length = 1210

 Score =  245 bits (626), Expect = 2e-63
 Identities = 119/132 (90%), Positives = 127/132 (96%)
 Frame = -2

Query: 401  FDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQ 222
            FDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQ
Sbjct: 829  FDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQ 888

Query: 221  QKRFFKARDMKDLFTLNVDGETGSTETSNIFSQISEEVNIIGTHKDNQDKHEYSQTAEPA 42
            QKRFFKARDMKDLFTLNVDGETGSTETSNIFSQISEEVN+IGT+K+N+DK+++SQTAE  
Sbjct: 889  QKRFFKARDMKDLFTLNVDGETGSTETSNIFSQISEEVNVIGTYKENKDKYKHSQTAELV 948

Query: 41   SEDVADHDDGKS 6
            SEDVA  +D KS
Sbjct: 949  SEDVAVGNDDKS 960


>ref|XP_002529848.1| DNA repair and recombination protein RAD26, putative [Ricinus
            communis] gi|223530676|gb|EEF32549.1| DNA repair and
            recombination protein RAD26, putative [Ricinus communis]
          Length = 1230

 Score =  210 bits (534), Expect = 1e-52
 Identities = 99/125 (79%), Positives = 112/125 (89%)
 Frame = -2

Query: 401  FDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQ 222
            FDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQ
Sbjct: 836  FDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQ 895

Query: 221  QKRFFKARDMKDLFTLNVDGETGSTETSNIFSQISEEVNIIGTHKDNQDKHEYSQTAEPA 42
            Q+RFFKARDMKDLFTLN DG +G TETSNIFSQ+SEEVN++G  K+ +DK ++ + +   
Sbjct: 896  QRRFFKARDMKDLFTLNDDGGSGLTETSNIFSQLSEEVNVVGAKKEKEDKKKHYKGSASH 955

Query: 41   SEDVA 27
            ++D A
Sbjct: 956  ADDAA 960


>ref|XP_002307656.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222857105|gb|EEE94652.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1206

 Score =  208 bits (530), Expect = 3e-52
 Identities = 102/135 (75%), Positives = 116/135 (85%), Gaps = 4/135 (2%)
 Frame = -2

Query: 401  FDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQ 222
            FDPDWNPSTDMQARERAWRIGQK+DVTVYRLIT GTIEEKVYHRQIYKHFLTNKILKNPQ
Sbjct: 832  FDPDWNPSTDMQARERAWRIGQKKDVTVYRLITGGTIEEKVYHRQIYKHFLTNKILKNPQ 891

Query: 221  QKRFFKARDMKDLFTLNVDGETGSTETSNIFSQISEEVNIIGTHKDNQDKHE----YSQT 54
            Q+RFF+ARDMKDLFTLN DGE GSTETSNIFSQ+SE+VN++GT K+   K +     +Q 
Sbjct: 892  QRRFFRARDMKDLFTLNDDGEGGSTETSNIFSQLSEDVNVVGTKKEKLKKRKKNKGIAQH 951

Query: 53   AEPASEDVADHDDGK 9
            A+ A ++ AD  DG+
Sbjct: 952  ADDAIKEKADCSDGE 966


>emb|CAN67815.1| hypothetical protein VITISV_002502 [Vitis vinifera]
          Length = 1249

 Score =  208 bits (530), Expect = 3e-52
 Identities = 98/112 (87%), Positives = 104/112 (92%)
 Frame = -2

Query: 401  FDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQ 222
            +DPDWNPSTDMQARERAWRIGQ RDVTVYRLITRGTIEEKVY RQIYKHFLTNKILKNPQ
Sbjct: 856  YDPDWNPSTDMQARERAWRIGQTRDVTVYRLITRGTIEEKVYQRQIYKHFLTNKILKNPQ 915

Query: 221  QKRFFKARDMKDLFTLNVDGETGSTETSNIFSQISEEVNIIGTHKDNQDKHE 66
            QKRFFKARDMKDLF LN DGE  STETSNIFSQ+SE+VN++G HKDNQDK +
Sbjct: 916  QKRFFKARDMKDLFVLNDDGEDASTETSNIFSQLSEDVNVVGKHKDNQDKQK 967


>emb|CBI37137.3| unnamed protein product [Vitis vinifera]
          Length = 1116

 Score =  207 bits (527), Expect = 7e-52
 Identities = 101/131 (77%), Positives = 111/131 (84%), Gaps = 2/131 (1%)
 Frame = -2

Query: 401  FDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQ 222
            +DPDWNPSTDMQARERAWRIGQ RDVTVYRLITRGTIEEKVY RQIYKHFLTNKILKNPQ
Sbjct: 807  YDPDWNPSTDMQARERAWRIGQTRDVTVYRLITRGTIEEKVYQRQIYKHFLTNKILKNPQ 866

Query: 221  QKRFFKARDMKDLFTLNVDGETGSTETSNIFSQISEEVNIIGTHKDNQDKHE--YSQTAE 48
            QKRFFKARDMKDLF LN DGE  STETSNIFSQ+SE+VN++G HKD+QDK +     + E
Sbjct: 867  QKRFFKARDMKDLFVLNDDGEDASTETSNIFSQLSEDVNVVGKHKDSQDKQKSIIPVSGE 926

Query: 47   PASEDVADHDD 15
               +D +D  D
Sbjct: 927  NEKDDQSDEMD 937


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