BLASTX nr result
ID: Glycyrrhiza23_contig00026876
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00026876 (402 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003541362.1| PREDICTED: DNA repair and recombination prot... 245 2e-63 ref|XP_002529848.1| DNA repair and recombination protein RAD26, ... 210 1e-52 ref|XP_002307656.1| chromatin remodeling complex subunit [Populu... 208 3e-52 emb|CAN67815.1| hypothetical protein VITISV_002502 [Vitis vinifera] 208 3e-52 emb|CBI37137.3| unnamed protein product [Vitis vinifera] 207 7e-52 >ref|XP_003541362.1| PREDICTED: DNA repair and recombination protein RAD26-like [Glycine max] Length = 1210 Score = 245 bits (626), Expect = 2e-63 Identities = 119/132 (90%), Positives = 127/132 (96%) Frame = -2 Query: 401 FDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQ 222 FDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQ Sbjct: 829 FDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQ 888 Query: 221 QKRFFKARDMKDLFTLNVDGETGSTETSNIFSQISEEVNIIGTHKDNQDKHEYSQTAEPA 42 QKRFFKARDMKDLFTLNVDGETGSTETSNIFSQISEEVN+IGT+K+N+DK+++SQTAE Sbjct: 889 QKRFFKARDMKDLFTLNVDGETGSTETSNIFSQISEEVNVIGTYKENKDKYKHSQTAELV 948 Query: 41 SEDVADHDDGKS 6 SEDVA +D KS Sbjct: 949 SEDVAVGNDDKS 960 >ref|XP_002529848.1| DNA repair and recombination protein RAD26, putative [Ricinus communis] gi|223530676|gb|EEF32549.1| DNA repair and recombination protein RAD26, putative [Ricinus communis] Length = 1230 Score = 210 bits (534), Expect = 1e-52 Identities = 99/125 (79%), Positives = 112/125 (89%) Frame = -2 Query: 401 FDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQ 222 FDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQ Sbjct: 836 FDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQ 895 Query: 221 QKRFFKARDMKDLFTLNVDGETGSTETSNIFSQISEEVNIIGTHKDNQDKHEYSQTAEPA 42 Q+RFFKARDMKDLFTLN DG +G TETSNIFSQ+SEEVN++G K+ +DK ++ + + Sbjct: 896 QRRFFKARDMKDLFTLNDDGGSGLTETSNIFSQLSEEVNVVGAKKEKEDKKKHYKGSASH 955 Query: 41 SEDVA 27 ++D A Sbjct: 956 ADDAA 960 >ref|XP_002307656.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222857105|gb|EEE94652.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1206 Score = 208 bits (530), Expect = 3e-52 Identities = 102/135 (75%), Positives = 116/135 (85%), Gaps = 4/135 (2%) Frame = -2 Query: 401 FDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQ 222 FDPDWNPSTDMQARERAWRIGQK+DVTVYRLIT GTIEEKVYHRQIYKHFLTNKILKNPQ Sbjct: 832 FDPDWNPSTDMQARERAWRIGQKKDVTVYRLITGGTIEEKVYHRQIYKHFLTNKILKNPQ 891 Query: 221 QKRFFKARDMKDLFTLNVDGETGSTETSNIFSQISEEVNIIGTHKDNQDKHE----YSQT 54 Q+RFF+ARDMKDLFTLN DGE GSTETSNIFSQ+SE+VN++GT K+ K + +Q Sbjct: 892 QRRFFRARDMKDLFTLNDDGEGGSTETSNIFSQLSEDVNVVGTKKEKLKKRKKNKGIAQH 951 Query: 53 AEPASEDVADHDDGK 9 A+ A ++ AD DG+ Sbjct: 952 ADDAIKEKADCSDGE 966 >emb|CAN67815.1| hypothetical protein VITISV_002502 [Vitis vinifera] Length = 1249 Score = 208 bits (530), Expect = 3e-52 Identities = 98/112 (87%), Positives = 104/112 (92%) Frame = -2 Query: 401 FDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQ 222 +DPDWNPSTDMQARERAWRIGQ RDVTVYRLITRGTIEEKVY RQIYKHFLTNKILKNPQ Sbjct: 856 YDPDWNPSTDMQARERAWRIGQTRDVTVYRLITRGTIEEKVYQRQIYKHFLTNKILKNPQ 915 Query: 221 QKRFFKARDMKDLFTLNVDGETGSTETSNIFSQISEEVNIIGTHKDNQDKHE 66 QKRFFKARDMKDLF LN DGE STETSNIFSQ+SE+VN++G HKDNQDK + Sbjct: 916 QKRFFKARDMKDLFVLNDDGEDASTETSNIFSQLSEDVNVVGKHKDNQDKQK 967 >emb|CBI37137.3| unnamed protein product [Vitis vinifera] Length = 1116 Score = 207 bits (527), Expect = 7e-52 Identities = 101/131 (77%), Positives = 111/131 (84%), Gaps = 2/131 (1%) Frame = -2 Query: 401 FDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQ 222 +DPDWNPSTDMQARERAWRIGQ RDVTVYRLITRGTIEEKVY RQIYKHFLTNKILKNPQ Sbjct: 807 YDPDWNPSTDMQARERAWRIGQTRDVTVYRLITRGTIEEKVYQRQIYKHFLTNKILKNPQ 866 Query: 221 QKRFFKARDMKDLFTLNVDGETGSTETSNIFSQISEEVNIIGTHKDNQDKHE--YSQTAE 48 QKRFFKARDMKDLF LN DGE STETSNIFSQ+SE+VN++G HKD+QDK + + E Sbjct: 867 QKRFFKARDMKDLFVLNDDGEDASTETSNIFSQLSEDVNVVGKHKDSQDKQKSIIPVSGE 926 Query: 47 PASEDVADHDD 15 +D +D D Sbjct: 927 NEKDDQSDEMD 937