BLASTX nr result

ID: Glycyrrhiza23_contig00026865 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026865
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK34059.1| unknown [Medicago truncatula]                          139   3e-31
dbj|BAC81662.1| DNA binding with one finger 5 protein [Pisum sat...   136   2e-30
ref|XP_003518090.1| PREDICTED: dof zinc finger protein DOF3.4 [G...   132   3e-29
ref|XP_003548014.1| PREDICTED: dof zinc finger protein DOF3.4 [G...   130   1e-28
ref|XP_003632455.1| PREDICTED: dof zinc finger protein DOF3.4-li...   125   5e-27

>gb|AFK34059.1| unknown [Medicago truncatula]
          Length = 229

 Score =  139 bits (349), Expect = 3e-31
 Identities = 74/121 (61%), Positives = 81/121 (66%), Gaps = 5/121 (4%)
 Frame = +2

Query: 2   CYYNNYNYSQPRHFCKACRRYWTHGGTLRDIPVGGGSRKNAKXXXXXXXXXXXXXXXXXX 181
           CYYNNYNYSQPRHFCKACRRYWTHGGTLRDIPVGGG+RKNAK                  
Sbjct: 42  CYYNNYNYSQPRHFCKACRRYWTHGGTLRDIPVGGGTRKNAKRSRTNHVAVTSSSAVTSA 101

Query: 182 XXPDHHFPAMAPIAATPVGTVPF--GVDGDVKQNVNVCGGSFTSLL---NNSTQGSGFLA 346
               HH+     I+A   G+ PF  GVDGD KQN++VC GSFTSLL   NN+ Q SGFLA
Sbjct: 102 APEYHHYQT---ISAVQGGSFPFSGGVDGDGKQNMSVC-GSFTSLLNNNNNNNQSSGFLA 157

Query: 347 L 349
           L
Sbjct: 158 L 158


>dbj|BAC81662.1| DNA binding with one finger 5 protein [Pisum sativum]
          Length = 234

 Score =  136 bits (343), Expect = 2e-30
 Identities = 72/119 (60%), Positives = 83/119 (69%), Gaps = 3/119 (2%)
 Frame = +2

Query: 2   CYYNNYNYSQPRHFCKACRRYWTHGGTLRDIPVGGGSRKNAK-XXXXXXXXXXXXXXXXX 178
           CYYNNYNYSQPRH CKACRRYWTHGGTLRDIPVGGG+RKNAK                  
Sbjct: 42  CYYNNYNYSQPRHLCKACRRYWTHGGTLRDIPVGGGTRKNAKRSRTHHVAVTSSSSSSAV 101

Query: 179 XXXPDHHFPAMAPIAATPVGTVPF-GVDGDVKQNVNVCGGSFTSLLNNS-TQGSGFLAL 349
              P+ ++P+M PI     G+ P+ GVDG+ KQN++VC GSFTSLLNN+  Q SGFLAL
Sbjct: 102 TSAPEQNYPSMTPIQG---GSFPYGGVDGEGKQNMSVC-GSFTSLLNNNPQQNSGFLAL 156


>ref|XP_003518090.1| PREDICTED: dof zinc finger protein DOF3.4 [Glycine max]
          Length = 234

 Score =  132 bits (332), Expect = 3e-29
 Identities = 75/123 (60%), Positives = 81/123 (65%), Gaps = 7/123 (5%)
 Frame = +2

Query: 2   CYYNNYNYSQPRHFCKACRRYWTHGGTLRDIPVGGGSRKNAK--XXXXXXXXXXXXXXXX 175
           CYYNNYNYSQPRHFCK+CRRYWTHGGTLRDIPVGGGSRKNAK                  
Sbjct: 44  CYYNNYNYSQPRHFCKSCRRYWTHGGTLRDIPVGGGSRKNAKRSRTHHVAATSSSSTSST 103

Query: 176 XXXXPDHH-FPAMAPIAATPVGTVPFGVDGDVKQ----NVNVCGGSFTSLLNNSTQGSGF 340
                +HH    +AP+A+T  G     +DGDVKQ    N NVC GSFTSLLNN T GSGF
Sbjct: 104 MTSAQEHHAHTLLAPVASTHYGV----LDGDVKQTSNGNGNVC-GSFTSLLNN-THGSGF 157

Query: 341 LAL 349
           LAL
Sbjct: 158 LAL 160


>ref|XP_003548014.1| PREDICTED: dof zinc finger protein DOF3.4 [Glycine max]
          Length = 236

 Score =  130 bits (327), Expect = 1e-28
 Identities = 74/125 (59%), Positives = 79/125 (63%), Gaps = 9/125 (7%)
 Frame = +2

Query: 2   CYYNNYNYSQPRHFCKACRRYWTHGGTLRDIPVGGGSRKNAKXXXXXXXXXXXXXXXXXX 181
           CYYNNYNYSQPRHFCK+CRRYWTHGGTLRDIPVGGGSRKNAK                  
Sbjct: 42  CYYNNYNYSQPRHFCKSCRRYWTHGGTLRDIPVGGGSRKNAKRSRTHHAAAATSSSSSTS 101

Query: 182 XXP----DHH----FPAMAPIAATPVGTVPFGVDGDVKQ-NVNVCGGSFTSLLNNSTQGS 334
                  +HH      A+AP+ A       FG DGDVKQ N N C GS+TSLLNN TQGS
Sbjct: 102 SATTSAHEHHNAHTLTALAPVTA----ATHFGHDGDVKQTNGNAC-GSYTSLLNN-TQGS 155

Query: 335 GFLAL 349
           GF AL
Sbjct: 156 GFFAL 160


>ref|XP_003632455.1| PREDICTED: dof zinc finger protein DOF3.4-like [Vitis vinifera]
           gi|147810110|emb|CAN75830.1| hypothetical protein
           VITISV_039634 [Vitis vinifera]
          Length = 220

 Score =  125 bits (313), Expect = 5e-27
 Identities = 68/116 (58%), Positives = 75/116 (64%)
 Frame = +2

Query: 2   CYYNNYNYSQPRHFCKACRRYWTHGGTLRDIPVGGGSRKNAKXXXXXXXXXXXXXXXXXX 181
           CYYNNYN+SQPRHFCK+CRRYWTHGGTLRDIPVGGGSRKNAK                  
Sbjct: 39  CYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGSRKNAK-------RSRTTTSSASS 91

Query: 182 XXPDHHFPAMAPIAATPVGTVPFGVDGDVKQNVNVCGGSFTSLLNNSTQGSGFLAL 349
             P    P +  ++     ++PF   GDVK  VNVC GSFTSLLN  TQG GFLAL
Sbjct: 92  QEPLPATPVLVSLSTNHATSMPF--VGDVKPTVNVC-GSFTSLLN--TQGPGFLAL 142


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