BLASTX nr result

ID: Glycyrrhiza23_contig00026841 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026841
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK33345.1| unknown [Medicago truncatula]                          117   1e-24
ref|XP_003544508.1| PREDICTED: homeobox-leucine zipper protein H...   105   5e-21
gb|ACU24573.1| unknown [Glycine max]                                  105   5e-21
ref|XP_003556960.1| PREDICTED: homeobox-leucine zipper protein H...   104   7e-21
ref|XP_002510028.1| homeobox protein, putative [Ricinus communis...   101   6e-20

>gb|AFK33345.1| unknown [Medicago truncatula]
          Length = 304

 Score =  117 bits (293), Expect = 1e-24
 Identities = 65/110 (59%), Positives = 73/110 (66%), Gaps = 1/110 (0%)
 Frame = +3

Query: 3   RTKLKQTEVDCELLKKCYETLTEENERLQKELQELKSMKTTTTGGPFYMQLPVATNLTVC 182
           RTK+KQTEVDCE LK CYETLTEEN RL++EL+ELKSMKT       YMQLPVA +LT C
Sbjct: 196 RTKVKQTEVDCEALKHCYETLTEENRRLEEELKELKSMKTVNN----YMQLPVA-SLTAC 250

Query: 183 PSCKTICXXXXXXXXXXXXXXXXXALPIGPKA-LHLFYTNNNYTFTHSSA 329
           PSCK IC                 AL + PKA +H +  NNNYTFT SSA
Sbjct: 251 PSCKRICTGTGTGTSDENGSSHTTALILCPKAQIHFYANNNNYTFTQSSA 300


>ref|XP_003544508.1| PREDICTED: homeobox-leucine zipper protein HOX19-like [Glycine max]
          Length = 305

 Score =  105 bits (261), Expect = 5e-21
 Identities = 61/113 (53%), Positives = 72/113 (63%), Gaps = 3/113 (2%)
 Frame = +3

Query: 3   RTKLKQTEVDCELLKKCYETLTEENERLQKELQELKSMKTTTTGGPFYMQLPVATNLTVC 182
           RTKLKQTE DCELLKKC +TLTEEN++LQKELQELKS++ T    P YMQ+P AT L +C
Sbjct: 194 RTKLKQTESDCELLKKCCDTLTEENKKLQKELQELKSIQATPM--PLYMQIPAAT-LCIC 250

Query: 183 PSCKTIC--XXXXXXXXXXXXXXXXXALPIGPKA-LHLFYTNNNYTFTHSSAA 332
           PSC+ IC                   +L IG K   H FY +N Y F HSS+A
Sbjct: 251 PSCERICGGNNNSDGGNNNNGSSHTTSLLIGSKTHHHSFYKSNKYPFPHSSSA 303


>gb|ACU24573.1| unknown [Glycine max]
          Length = 305

 Score =  105 bits (261), Expect = 5e-21
 Identities = 61/113 (53%), Positives = 72/113 (63%), Gaps = 3/113 (2%)
 Frame = +3

Query: 3   RTKLKQTEVDCELLKKCYETLTEENERLQKELQELKSMKTTTTGGPFYMQLPVATNLTVC 182
           RTKLKQTE DCELLKKC +TLTEEN++LQKELQELKS++ T    P YMQ+P AT L +C
Sbjct: 194 RTKLKQTESDCELLKKCCDTLTEENKKLQKELQELKSIQATPM--PLYMQIPAAT-LCIC 250

Query: 183 PSCKTIC--XXXXXXXXXXXXXXXXXALPIGPKA-LHLFYTNNNYTFTHSSAA 332
           PSC+ IC                   +L IG K   H FY +N Y F HSS+A
Sbjct: 251 PSCERICGGNNNSDGGNNNNGSSHTTSLLIGSKTHHHSFYKSNKYPFPHSSSA 303


>ref|XP_003556960.1| PREDICTED: homeobox-leucine zipper protein HOX19-like [Glycine max]
          Length = 309

 Score =  104 bits (260), Expect = 7e-21
 Identities = 61/112 (54%), Positives = 71/112 (63%), Gaps = 2/112 (1%)
 Frame = +3

Query: 3   RTKLKQTEVDCELLKKCYETLTEENERLQKELQELKSMKTTTTGGPFYMQLPVATNLTVC 182
           RTKLKQT  DCELLKKC +TLT EN++LQKELQELKSM+ T    P YMQ+P AT L++C
Sbjct: 199 RTKLKQTVSDCELLKKCCDTLTVENKKLQKELQELKSMQATPV--PLYMQIPAAT-LSIC 255

Query: 183 PSCKTIC-XXXXXXXXXXXXXXXXXALPIGPKA-LHLFYTNNNYTFTHSSAA 332
           PSC+ IC                   L IG K   H FY +NNY F HSS+A
Sbjct: 256 PSCERICGGNENNGDNNNNGSSHTTTLLIGSKTHHHSFYKSNNYPFPHSSSA 307


>ref|XP_002510028.1| homeobox protein, putative [Ricinus communis]
           gi|223550729|gb|EEF52215.1| homeobox protein, putative
           [Ricinus communis]
          Length = 274

 Score =  101 bits (252), Expect = 6e-20
 Identities = 61/111 (54%), Positives = 69/111 (62%)
 Frame = +3

Query: 3   RTKLKQTEVDCELLKKCYETLTEENERLQKELQELKSMKTTTTGGPFYMQLPVATNLTVC 182
           RTKLKQTEVDCE+LKKC ETLTEEN RLQKELQELKS+K      PFYMQLP AT LT+C
Sbjct: 178 RTKLKQTEVDCEVLKKCCETLTEENNRLQKELQELKSLK--LQAAPFYMQLPAAT-LTMC 234

Query: 183 PSCKTICXXXXXXXXXXXXXXXXXALPIGPKALHLFYTNNNYTFTHSSAAC 335
           PSC+ I                   + +G  +   FY+     FTH SAAC
Sbjct: 235 PSCERI-------GGGGDGSSSTSTITVGVGSKPHFYS----PFTHPSAAC 274


Top