BLASTX nr result
ID: Glycyrrhiza23_contig00026825
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00026825
(271 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003602445.1| ABC transporter ATP-binding protein/permease... 166 1e-39
ref|XP_002269539.2| PREDICTED: ABC transporter B family member 1... 140 8e-32
emb|CBI23123.3| unnamed protein product [Vitis vinifera] 140 8e-32
ref|XP_002515660.1| multidrug resistance protein 1, 2, putative ... 133 2e-29
ref|XP_002321339.1| multidrug/pheromone exporter, MDR family, AB... 130 9e-29
>ref|XP_003602445.1| ABC transporter ATP-binding protein/permease [Medicago truncatula]
gi|355491493|gb|AES72696.1| ABC transporter ATP-binding
protein/permease [Medicago truncatula]
Length = 1342
Score = 166 bits (421), Expect = 1e-39
Identities = 82/88 (93%), Positives = 85/88 (96%)
Frame = +3
Query: 3 NILTPAFQTLDRKTEIEPDIPDDSQPERIQGNVEFENVKFKYPSRPEVTVLDNFSLQIEA 182
N+LTPAF+TLDRKTEIEPDIPDDSQP+RIQGNVEFENV FKYP RP VTVLDNFSLQIEA
Sbjct: 1058 NMLTPAFKTLDRKTEIEPDIPDDSQPDRIQGNVEFENVNFKYPLRPTVTVLDNFSLQIEA 1117
Query: 183 GSKVAFVGPSGAGKSSVLALLLRFYDPV 266
GSKVAFVGPSGAGKSSVLALLLRFYDPV
Sbjct: 1118 GSKVAFVGPSGAGKSSVLALLLRFYDPV 1145
Score = 75.1 bits (183), Expect = 6e-12
Identities = 38/81 (46%), Positives = 48/81 (59%)
Frame = +3
Query: 21 FQTLDRKTEIEPDIPDDSQPERIQGNVEFENVKFKYPSRPEVTVLDNFSLQIEAGSKVAF 200
FQ + RK I + P +I G++E NV F YPSR E +L SL I AG VA
Sbjct: 351 FQVIQRKPLIHNE-SKGKMPNKIDGSIELRNVYFSYPSRSEKPILQGLSLSIPAGKTVAL 409
Query: 201 VGPSGAGKSSVLALLLRFYDP 263
VG SG GKS+ ++L+ RFYDP
Sbjct: 410 VGSSGCGKSTAISLITRFYDP 430
>ref|XP_002269539.2| PREDICTED: ABC transporter B family member 19-like [Vitis vinifera]
Length = 1252
Score = 140 bits (354), Expect = 8e-32
Identities = 68/89 (76%), Positives = 78/89 (87%)
Frame = +3
Query: 3 NILTPAFQTLDRKTEIEPDIPDDSQPERIQGNVEFENVKFKYPSRPEVTVLDNFSLQIEA 182
+ILTP F+TLDRKTEIEPD P++S E+I+G +EF+NV F YP RPEVTVL+NF LQIEA
Sbjct: 970 SILTPTFKTLDRKTEIEPDTPENSHAEKIKGRIEFQNVSFNYPLRPEVTVLNNFCLQIEA 1029
Query: 183 GSKVAFVGPSGAGKSSVLALLLRFYDPVA 269
GSKVA VGPSGAGKSSVLAL+LRFYDP A
Sbjct: 1030 GSKVALVGPSGAGKSSVLALILRFYDPRA 1058
Score = 78.2 bits (191), Expect = 7e-13
Identities = 40/81 (49%), Positives = 52/81 (64%)
Frame = +3
Query: 21 FQTLDRKTEIEPDIPDDSQPERIQGNVEFENVKFKYPSRPEVTVLDNFSLQIEAGSKVAF 200
FQ + RK I D + E+I GN++ ++V F YPSR E +LD FS I AG VA
Sbjct: 337 FQVIKRKPAISYD-SEGKTLEKINGNIDMQDVYFTYPSRKERLILDGFSFSIPAGKVVAL 395
Query: 201 VGPSGAGKSSVLALLLRFYDP 263
VG SG GKS+V++L+ RFYDP
Sbjct: 396 VGSSGCGKSTVISLVARFYDP 416
>emb|CBI23123.3| unnamed protein product [Vitis vinifera]
Length = 1157
Score = 140 bits (354), Expect = 8e-32
Identities = 68/89 (76%), Positives = 78/89 (87%)
Frame = +3
Query: 3 NILTPAFQTLDRKTEIEPDIPDDSQPERIQGNVEFENVKFKYPSRPEVTVLDNFSLQIEA 182
+ILTP F+TLDRKTEIEPD P++S E+I+G +EF+NV F YP RPEVTVL+NF LQIEA
Sbjct: 906 SILTPTFKTLDRKTEIEPDTPENSHAEKIKGRIEFQNVSFNYPLRPEVTVLNNFCLQIEA 965
Query: 183 GSKVAFVGPSGAGKSSVLALLLRFYDPVA 269
GSKVA VGPSGAGKSSVLAL+LRFYDP A
Sbjct: 966 GSKVALVGPSGAGKSSVLALILRFYDPRA 994
Score = 78.2 bits (191), Expect = 7e-13
Identities = 40/81 (49%), Positives = 52/81 (64%)
Frame = +3
Query: 21 FQTLDRKTEIEPDIPDDSQPERIQGNVEFENVKFKYPSRPEVTVLDNFSLQIEAGSKVAF 200
FQ + RK I D + E+I GN++ ++V F YPSR E +LD FS I AG VA
Sbjct: 337 FQVIKRKPAISYD-SEGKTLEKINGNIDMQDVYFTYPSRKERLILDGFSFSIPAGKVVAL 395
Query: 201 VGPSGAGKSSVLALLLRFYDP 263
VG SG GKS+V++L+ RFYDP
Sbjct: 396 VGSSGCGKSTVISLVARFYDP 416
>ref|XP_002515660.1| multidrug resistance protein 1, 2, putative [Ricinus communis]
gi|223545203|gb|EEF46712.1| multidrug resistance protein
1, 2, putative [Ricinus communis]
Length = 1289
Score = 133 bits (334), Expect = 2e-29
Identities = 65/86 (75%), Positives = 73/86 (84%)
Frame = +3
Query: 6 ILTPAFQTLDRKTEIEPDIPDDSQPERIQGNVEFENVKFKYPSRPEVTVLDNFSLQIEAG 185
+LTPAF+TLDR+TEIEPD P S +RI G VE +NVKF YP RPEVTVL+NFSL IEAG
Sbjct: 1007 VLTPAFETLDRETEIEPDAPKSSHLKRIMGRVELQNVKFYYPLRPEVTVLNNFSLHIEAG 1066
Query: 186 SKVAFVGPSGAGKSSVLALLLRFYDP 263
+VA VGPSGAGKSS+LALLLRFYDP
Sbjct: 1067 LRVALVGPSGAGKSSILALLLRFYDP 1092
Score = 68.9 bits (167), Expect = 4e-10
Identities = 35/85 (41%), Positives = 53/85 (62%)
Frame = +3
Query: 12 TPAFQTLDRKTEIEPDIPDDSQPERIQGNVEFENVKFKYPSRPEVTVLDNFSLQIEAGSK 191
T F+ ++RK I I +++GN+E ++V F YPSR + +L SL I AG
Sbjct: 367 TEVFKVINRKPLIR-HISTGRTLIKVEGNIEIKDVYFAYPSRQDNLILRGLSLSIPAGKT 425
Query: 192 VAFVGPSGAGKSSVLALLLRFYDPV 266
+A VG SG GKS++++L+ RFYDP+
Sbjct: 426 MALVGSSGCGKSTIISLVARFYDPL 450
>ref|XP_002321339.1| multidrug/pheromone exporter, MDR family, ABC transporter family
[Populus trichocarpa] gi|222868335|gb|EEF05466.1|
multidrug/pheromone exporter, MDR family, ABC transporter
family [Populus trichocarpa]
Length = 1275
Score = 130 bits (328), Expect = 9e-29
Identities = 63/86 (73%), Positives = 72/86 (83%)
Frame = +3
Query: 6 ILTPAFQTLDRKTEIEPDIPDDSQPERIQGNVEFENVKFKYPSRPEVTVLDNFSLQIEAG 185
+L PAF+TLDR+TEI+PDIP E I G +EF+N++F YP RPEVTVL NFSLQIEAG
Sbjct: 993 VLAPAFETLDRETEIQPDIPKSPDLETIVGRIEFQNIQFNYPLRPEVTVLHNFSLQIEAG 1052
Query: 186 SKVAFVGPSGAGKSSVLALLLRFYDP 263
KVA VGPSG+GKSSVLALLLRFYDP
Sbjct: 1053 LKVALVGPSGSGKSSVLALLLRFYDP 1078
Score = 73.2 bits (178), Expect = 2e-11
Identities = 38/84 (45%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Frame = +3
Query: 21 FQTLDRKTEIEPDIPDDSQP---ERIQGNVEFENVKFKYPSRPEVTVLDNFSLQIEAGSK 191
F + RK P I +DS+ +R+ GN++ V F YPSR + +L FSL I +G
Sbjct: 356 FDVIQRK----PLITNDSKGKTLDRVDGNIDIRGVHFAYPSRQDALILKGFSLSIPSGKM 411
Query: 192 VAFVGPSGAGKSSVLALLLRFYDP 263
VA VG SG GKS+V++L+ RFYDP
Sbjct: 412 VALVGSSGCGKSTVISLIARFYDP 435