BLASTX nr result

ID: Glycyrrhiza23_contig00026806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026806
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40399.1| unknown [Lotus japonicus]                              105   3e-21
ref|XP_003618722.1| hypothetical protein MTR_6g015150 [Medicago ...    90   3e-16
ref|XP_002526110.1| conserved hypothetical protein [Ricinus comm...    77   2e-12
ref|XP_002324106.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|XP_002306069.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11

>gb|AFK40399.1| unknown [Lotus japonicus]
          Length = 116

 Score =  105 bits (263), Expect = 3e-21
 Identities = 71/115 (61%), Positives = 75/115 (65%), Gaps = 4/115 (3%)
 Frame = +2

Query: 68  MSTNTQHSYKLSVKXXXXXXXXXXXXXXXXXXXXXXXXXXXPSIG----TMVQMEGKSNK 235
           MS NT+  YKLSVK                           PSIG    TMVQ+E KS K
Sbjct: 1   MSINTKQIYKLSVKRATNRRRRQQHHQQRRRRTNS------PSIGRSFKTMVQVESKS-K 53

Query: 236 LSQKLQALKNLIPTHHINNGDNMVKPDQLFKETADYIVLLRTRVLVLQKLIEYYG 400
           LSQKLQALK+LIPTH   NG+ MVKPDQLFKETADYIVLLRTRVLVLQKLIEYYG
Sbjct: 54  LSQKLQALKDLIPTH---NGE-MVKPDQLFKETADYIVLLRTRVLVLQKLIEYYG 104


>ref|XP_003618722.1| hypothetical protein MTR_6g015150 [Medicago truncatula]
           gi|355493737|gb|AES74940.1| hypothetical protein
           MTR_6g015150 [Medicago truncatula]
           gi|388512729|gb|AFK44426.1| unknown [Medicago
           truncatula]
          Length = 97

 Score = 89.7 bits (221), Expect = 3e-16
 Identities = 58/111 (52%), Positives = 64/111 (57%)
 Frame = +2

Query: 68  MSTNTQHSYKLSVKXXXXXXXXXXXXXXXXXXXXXXXXXXXPSIGTMVQMEGKSNKLSQK 247
           MSTNTQHSYKLSVK                                M +      KLSQK
Sbjct: 1   MSTNTQHSYKLSVKKATRRTRRRK----------------------MEEKCKSKKKLSQK 38

Query: 248 LQALKNLIPTHHINNGDNMVKPDQLFKETADYIVLLRTRVLVLQKLIEYYG 400
           L+ALKNLIP+   NNGD  VK D+LFKETADYIV LRTRVL+LQKL+E YG
Sbjct: 39  LKALKNLIPS---NNGDE-VKTDELFKETADYIVFLRTRVLILQKLVEIYG 85


>ref|XP_002526110.1| conserved hypothetical protein [Ricinus communis]
           gi|223534607|gb|EEF36304.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 119

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 43/72 (59%), Positives = 54/72 (75%)
 Frame = +2

Query: 227 SNKLSQKLQALKNLIPTHHINNGDNMVKPDQLFKETADYIVLLRTRVLVLQKLIEYYGXX 406
           S+K+S KL+ALKNLIP    NNG+ +VK DQLF+ETADYIVLLRT+V VLQ+LI++YG  
Sbjct: 52  SSKVSHKLEALKNLIPA---NNGE-IVKADQLFQETADYIVLLRTQVFVLQRLIQFYGSS 107

Query: 407 XXXXXXXXAVLL 442
                   AV+L
Sbjct: 108 TTEADNENAVIL 119


>ref|XP_002324106.1| predicted protein [Populus trichocarpa] gi|222867108|gb|EEF04239.1|
           predicted protein [Populus trichocarpa]
          Length = 110

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 38/57 (66%), Positives = 50/57 (87%)
 Frame = +2

Query: 230 NKLSQKLQALKNLIPTHHINNGDNMVKPDQLFKETADYIVLLRTRVLVLQKLIEYYG 400
           +K+S KL+ALKNLIP    +NG+ +VKPDQLFKETADYI+LLRT+V++LQ L+E+YG
Sbjct: 44  SKVSDKLEALKNLIPAT-CHNGE-IVKPDQLFKETADYILLLRTQVVLLQGLVEFYG 98


>ref|XP_002306069.1| predicted protein [Populus trichocarpa] gi|222849033|gb|EEE86580.1|
           predicted protein [Populus trichocarpa]
          Length = 103

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 39/57 (68%), Positives = 48/57 (84%)
 Frame = +2

Query: 230 NKLSQKLQALKNLIPTHHINNGDNMVKPDQLFKETADYIVLLRTRVLVLQKLIEYYG 400
           NK+S K++ALKNLIP  H  NG+  VK DQLF+ETADYIVLLRT+VLVL+ LI++YG
Sbjct: 44  NKVSDKMEALKNLIPATH--NGE--VKADQLFQETADYIVLLRTQVLVLKGLIDFYG 96


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