BLASTX nr result

ID: Glycyrrhiza23_contig00026785 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026785
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003630782.1| Pentatricopeptide repeat-containing protein ...   189   2e-46
ref|XP_003630764.1| Pentatricopeptide repeat-containing protein ...   189   2e-46
ref|XP_003532483.1| PREDICTED: pentatricopeptide repeat-containi...   184   5e-45
ref|XP_002280803.2| PREDICTED: pentatricopeptide repeat-containi...   179   2e-43
emb|CBI28050.3| unnamed protein product [Vitis vinifera]              179   2e-43

>ref|XP_003630782.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355524804|gb|AET05258.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 668

 Score =  189 bits (481), Expect = 2e-46
 Identities = 97/122 (79%), Positives = 101/122 (82%)
 Frame = +1

Query: 1   YALKRGFEVYENMCVDKVQMNEAALTSVXXXXXXXXXXXXXFEMVKQMKTFGINPRLRSY 180
           YAL+RGFEVYENM + KV+MNEAALTSV             FEMVKQMK  GINPRLRSY
Sbjct: 194 YALQRGFEVYENMRMSKVEMNEAALTSVARMAMALSDGDKAFEMVKQMKILGINPRLRSY 253

Query: 181 GPALSTYCNNGEIDKAFVVEKHMVEHGVCPEEPELEALLRVSISAGKSDRVYYVLHKLRS 360
           GPALSTYCNNGEIDKAF VEKHM+EHGV PEEPELEALLRVSI  GKSDRVYYVLHKLRS
Sbjct: 254 GPALSTYCNNGEIDKAFDVEKHMLEHGVYPEEPELEALLRVSIRGGKSDRVYYVLHKLRS 313

Query: 361 SV 366
           SV
Sbjct: 314 SV 315


>ref|XP_003630764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355524786|gb|AET05240.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 702

 Score =  189 bits (481), Expect = 2e-46
 Identities = 97/122 (79%), Positives = 101/122 (82%)
 Frame = +1

Query: 1   YALKRGFEVYENMCVDKVQMNEAALTSVXXXXXXXXXXXXXFEMVKQMKTFGINPRLRSY 180
           YAL+RGFEVYENM + KV+MNEAALTSV             FEMVKQMK  GINPRLRSY
Sbjct: 228 YALQRGFEVYENMRMSKVEMNEAALTSVARMAMALSDGDKAFEMVKQMKILGINPRLRSY 287

Query: 181 GPALSTYCNNGEIDKAFVVEKHMVEHGVCPEEPELEALLRVSISAGKSDRVYYVLHKLRS 360
           GPALSTYCNNGEIDKAF VEKHM+EHGV PEEPELEALLRVSI  GKSDRVYYVLHKLRS
Sbjct: 288 GPALSTYCNNGEIDKAFDVEKHMLEHGVYPEEPELEALLRVSIRGGKSDRVYYVLHKLRS 347

Query: 361 SV 366
           SV
Sbjct: 348 SV 349


>ref|XP_003532483.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Glycine max]
          Length = 724

 Score =  184 bits (468), Expect = 5e-45
 Identities = 90/122 (73%), Positives = 101/122 (82%)
 Frame = +1

Query: 1   YALKRGFEVYENMCVDKVQMNEAALTSVXXXXXXXXXXXXXFEMVKQMKTFGINPRLRSY 180
           YAL+RGFEVY+NMC+DKVQMNEAALT+V             FEMV+QMK  GI+PRLRSY
Sbjct: 217 YALQRGFEVYQNMCLDKVQMNEAALTAVARMAMSMGDGDRAFEMVRQMKDLGISPRLRSY 276

Query: 181 GPALSTYCNNGEIDKAFVVEKHMVEHGVCPEEPELEALLRVSISAGKSDRVYYVLHKLRS 360
           GPAL T+CNNGEIDKAF VEKHM++HGV PEEPELEALLRVS+ AG SD+VYYVLHKLRS
Sbjct: 277 GPALFTFCNNGEIDKAFAVEKHMLQHGVYPEEPELEALLRVSVGAGNSDKVYYVLHKLRS 336

Query: 361 SV 366
            V
Sbjct: 337 IV 338


>ref|XP_002280803.2| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Vitis vinifera]
          Length = 816

 Score =  179 bits (454), Expect = 2e-43
 Identities = 87/122 (71%), Positives = 99/122 (81%)
 Frame = +1

Query: 1   YALKRGFEVYENMCVDKVQMNEAALTSVXXXXXXXXXXXXXFEMVKQMKTFGINPRLRSY 180
           YAL+RGFE+YE MC++KV MNEA LTSV             F+MVKQMK  GINPRLRSY
Sbjct: 309 YALRRGFEIYEKMCLEKVPMNEATLTSVARMAMSMGNGDMAFDMVKQMKPLGINPRLRSY 368

Query: 181 GPALSTYCNNGEIDKAFVVEKHMVEHGVCPEEPELEALLRVSISAGKSDRVYYVLHKLRS 360
           GPALS +CNNG+I+KAF VE+HM+EHGV PEEPELEALLRV I AGKSD+VYYVLHKLR+
Sbjct: 369 GPALSAFCNNGDIEKAFGVEEHMLEHGVYPEEPELEALLRVGIEAGKSDKVYYVLHKLRT 428

Query: 361 SV 366
           SV
Sbjct: 429 SV 430


>emb|CBI28050.3| unnamed protein product [Vitis vinifera]
          Length = 751

 Score =  179 bits (454), Expect = 2e-43
 Identities = 87/122 (71%), Positives = 99/122 (81%)
 Frame = +1

Query: 1   YALKRGFEVYENMCVDKVQMNEAALTSVXXXXXXXXXXXXXFEMVKQMKTFGINPRLRSY 180
           YAL+RGFE+YE MC++KV MNEA LTSV             F+MVKQMK  GINPRLRSY
Sbjct: 244 YALRRGFEIYEKMCLEKVPMNEATLTSVARMAMSMGNGDMAFDMVKQMKPLGINPRLRSY 303

Query: 181 GPALSTYCNNGEIDKAFVVEKHMVEHGVCPEEPELEALLRVSISAGKSDRVYYVLHKLRS 360
           GPALS +CNNG+I+KAF VE+HM+EHGV PEEPELEALLRV I AGKSD+VYYVLHKLR+
Sbjct: 304 GPALSAFCNNGDIEKAFGVEEHMLEHGVYPEEPELEALLRVGIEAGKSDKVYYVLHKLRT 363

Query: 361 SV 366
           SV
Sbjct: 364 SV 365


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