BLASTX nr result

ID: Glycyrrhiza23_contig00026776 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026776
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003622329.1| E3 ubiquitin-protein ligase RGLG2 [Medicago ...   150   1e-34
ref|XP_003555130.1| PREDICTED: E3 ubiquitin-protein ligase RGLG1...   145   3e-33
ref|XP_003548557.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   144   1e-32
ref|XP_002271885.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   125   4e-27
ref|XP_002526974.1| copine, putative [Ricinus communis] gi|22353...   125   5e-27

>ref|XP_003622329.1| E3 ubiquitin-protein ligase RGLG2 [Medicago truncatula]
           gi|355497344|gb|AES78547.1| E3 ubiquitin-protein ligase
           RGLG2 [Medicago truncatula]
          Length = 445

 Score =  150 bits (379), Expect = 1e-34
 Identities = 79/117 (67%), Positives = 86/117 (73%), Gaps = 13/117 (11%)
 Frame = -2

Query: 314 FQFVNFTEIMSKNIPSSRKEAVFALAALMEIPSQYKAALELNLLGKQEANAPQRV----- 150
           FQFVNFTEIMSKN P SRKEA FALAALMEIPSQYKAA+ELNLLGK+E NA QRV     
Sbjct: 300 FQFVNFTEIMSKNTPPSRKEAAFALAALMEIPSQYKAAIELNLLGKKEVNASQRVPLPPP 359

Query: 149 --------XXXXXXXXXXPQHCNNCPIGTAPSAPSSTYDNQLCPICLSNSKDMAFGC 3
                              Q+ N+ P+GTAPSAPSSTYDNQLCPICL+N+KDMAFGC
Sbjct: 360 YMRTSKPSHAARFEPIIPRQYGNSLPMGTAPSAPSSTYDNQLCPICLTNTKDMAFGC 416


>ref|XP_003555130.1| PREDICTED: E3 ubiquitin-protein ligase RGLG1-like [Glycine max]
          Length = 428

 Score =  145 bits (366), Expect = 3e-33
 Identities = 78/113 (69%), Positives = 84/113 (74%), Gaps = 9/113 (7%)
 Frame = -2

Query: 314 FQFVNFTEIMSKNIPSSRKEAVFALAALMEIPSQYKAALELNLLGKQEANAPQR------ 153
           FQFVNFTEIMSK+IP SRKEA FALAALMEIPSQYKAA+EL LLG ++ANAPQR      
Sbjct: 287 FQFVNFTEIMSKSIPPSRKEAAFALAALMEIPSQYKAAIELKLLGSRQANAPQRHALPPP 346

Query: 152 ---VXXXXXXXXXXPQHCNNCPIGTAPSAPSSTYDNQLCPICLSNSKDMAFGC 3
                         PQH N+ P  TAPSAPSST DNQLCPICLSN+KDMAFGC
Sbjct: 347 RYSSHAARFEPSIPPQHGNSHPFATAPSAPSSTSDNQLCPICLSNAKDMAFGC 399


>ref|XP_003548557.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Glycine max]
          Length = 426

 Score =  144 bits (362), Expect = 1e-32
 Identities = 78/113 (69%), Positives = 84/113 (74%), Gaps = 9/113 (7%)
 Frame = -2

Query: 314 FQFVNFTEIMSKNIPSSRKEAVFALAALMEIPSQYKAALELNLLGKQEANAPQR------ 153
           FQFVNFTEIMSKNIP SRKEA FALAALMEIPSQYKAA+ELNLLG ++ NA QR      
Sbjct: 285 FQFVNFTEIMSKNIPPSRKEASFALAALMEIPSQYKAAIELNLLGTRQVNALQRHALPPP 344

Query: 152 ---VXXXXXXXXXXPQHCNNCPIGTAPSAPSSTYDNQLCPICLSNSKDMAFGC 3
                         PQH N+  + TAPSAPSSTYDNQLCPICLSN+KDMAFGC
Sbjct: 345 TYNPHAARFEPSIPPQHGNSHLVATAPSAPSSTYDNQLCPICLSNAKDMAFGC 397


>ref|XP_002271885.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2 [Vitis vinifera]
           gi|296087586|emb|CBI34842.3| unnamed protein product
           [Vitis vinifera]
          Length = 461

 Score =  125 bits (314), Expect = 4e-27
 Identities = 67/124 (54%), Positives = 79/124 (63%), Gaps = 20/124 (16%)
 Frame = -2

Query: 314 FQFVNFTEIMSKNIPSSRKEAVFALAALMEIPSQYKAALELNLLGKQEANAPQRVXXXXX 135
           FQFVNFTEIMSKN+  SRKE  FALAALMEIPSQYKA +ELN+LG ++ +AP+RV     
Sbjct: 309 FQFVNFTEIMSKNVDLSRKETEFALAALMEIPSQYKATIELNILGGRKGDAPERVPLPTP 368

Query: 134 XXXXXPQHCN--------------------NCPIGTAPSAPSSTYDNQLCPICLSNSKDM 15
                    N                    + P+GTAP A SST+DNQLCPICL+N K+M
Sbjct: 369 MYYGATSFFNSSKPSRTTSFQPSVPPYPEDSSPVGTAPPATSSTFDNQLCPICLTNVKNM 428

Query: 14  AFGC 3
           AFGC
Sbjct: 429 AFGC 432


>ref|XP_002526974.1| copine, putative [Ricinus communis] gi|223533726|gb|EEF35461.1|
           copine, putative [Ricinus communis]
          Length = 461

 Score =  125 bits (313), Expect = 5e-27
 Identities = 66/122 (54%), Positives = 78/122 (63%), Gaps = 18/122 (14%)
 Frame = -2

Query: 314 FQFVNFTEIMSKNIPSSRKEAVFALAALMEIPSQYKAALELNLLGKQEANAPQRVXXXXX 135
           FQFVNFTEIMSK + +SRKE  FALAALMEIPSQYKA +ELN+LG+ + N P+RV     
Sbjct: 311 FQFVNFTEIMSKQVDASRKETEFALAALMEIPSQYKATIELNILGRHKGNIPERVALPPP 370

Query: 134 XXXXXPQH------------------CNNCPIGTAPSAPSSTYDNQLCPICLSNSKDMAF 9
                  +                   ++ P  +AP+APSS YDNQLCPICLSN KDMAF
Sbjct: 371 LYGAASFNSPKPSHSTGFKPSVPSFPVDSPPTSSAPTAPSSNYDNQLCPICLSNPKDMAF 430

Query: 8   GC 3
           GC
Sbjct: 431 GC 432


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