BLASTX nr result

ID: Glycyrrhiza23_contig00026773 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026773
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518090.1| PREDICTED: dof zinc finger protein DOF3.4 [G...    92   6e-17
ref|XP_003548014.1| PREDICTED: dof zinc finger protein DOF3.4 [G...    91   7e-17
dbj|BAC81662.1| DNA binding with one finger 5 protein [Pisum sat...    76   2e-12
gb|AFK34059.1| unknown [Medicago truncatula]                           72   5e-11
ref|XP_003632455.1| PREDICTED: dof zinc finger protein DOF3.4-li...    67   3e-10

>ref|XP_003518090.1| PREDICTED: dof zinc finger protein DOF3.4 [Glycine max]
          Length = 234

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 43/60 (71%), Positives = 47/60 (78%)
 Frame = +1

Query: 70  IGRAGWAFPGMVDGPNIGGAVAAPGVGNTWQLXXXXXXXXXXDCFSWPGLAISTPGNGLK 249
           IGR+GWAFPGMVDG NIGGAVA+ G+ NTWQL          DCF+WPGLAISTPGNGLK
Sbjct: 176 IGRSGWAFPGMVDGGNIGGAVASSGL-NTWQLESGEGGFVSGDCFAWPGLAISTPGNGLK 234


>ref|XP_003548014.1| PREDICTED: dof zinc finger protein DOF3.4 [Glycine max]
          Length = 236

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 43/60 (71%), Positives = 46/60 (76%)
 Frame = +1

Query: 70  IGRAGWAFPGMVDGPNIGGAVAAPGVGNTWQLXXXXXXXXXXDCFSWPGLAISTPGNGLK 249
           IGR+GWAFPGMVD  NIGGA+A+ GV NTWQL          DCFSWPGLAISTPGNGLK
Sbjct: 178 IGRSGWAFPGMVDNGNIGGAIASSGV-NTWQLESGEGGFVGGDCFSWPGLAISTPGNGLK 236


>dbj|BAC81662.1| DNA binding with one finger 5 protein [Pisum sativum]
          Length = 234

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 37/62 (59%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
 Frame = +1

Query: 70  IGRAGWAFPGMVDGPNIGGAVAAPGVGNTWQLXXXXXXXXXX--DCFSWPGLAISTPGNG 243
           IGR  W+FPGM+DG N+G  V + G+GN+WQL            DCFSWPGLAISTPGNG
Sbjct: 174 IGRE-WSFPGMMDGSNMGVPVVSSGIGNSWQLEGGETGFVGGGGDCFSWPGLAISTPGNG 232

Query: 244 LK 249
           LK
Sbjct: 233 LK 234


>gb|AFK34059.1| unknown [Medicago truncatula]
          Length = 229

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 39/62 (62%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
 Frame = +1

Query: 70  IGRAGWAFPGMVDGPNIGGAVAAPGV-GNTWQLXXXXXXXXXX-DCFSWPGLAISTPGNG 243
           IGR GWAFPGM+DG      V +PGV GNTWQL           DCFSWPGLAISTP NG
Sbjct: 172 IGRTGWAFPGMMDGV----PVVSPGVVGNTWQLEGGEGGFVGAGDCFSWPGLAISTPVNG 227

Query: 244 LK 249
           LK
Sbjct: 228 LK 229


>ref|XP_003632455.1| PREDICTED: dof zinc finger protein DOF3.4-like [Vitis vinifera]
           gi|147810110|emb|CAN75830.1| hypothetical protein
           VITISV_039634 [Vitis vinifera]
          Length = 220

 Score = 66.6 bits (161), Expect(2) = 3e-10
 Identities = 33/61 (54%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
 Frame = +1

Query: 70  IGRAGWAFPGMVDGPNIGGAVAAPG-VGNTWQLXXXXXXXXXXDCFSWPGLAISTPGNGL 246
           +GR  W FPG  DG   GG       VGNTWQ           DCFSWP LAISTPGNGL
Sbjct: 160 LGRGVWPFPGAGDGGASGGTGGGTALVGNTWQFESGEGGFVAGDCFSWPDLAISTPGNGL 219

Query: 247 K 249
           K
Sbjct: 220 K 220



 Score = 22.7 bits (47), Expect(2) = 3e-10
 Identities = 13/31 (41%), Positives = 13/31 (41%)
 Frame = +2

Query: 2   PAFWHWVGLGLGLDMGSRKWASVLGERVGPF 94
           P F    G GLGL  G       LG  V PF
Sbjct: 137 PGFLALGGFGLGLGPGFEDMGFGLGRGVWPF 167


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