BLASTX nr result
ID: Glycyrrhiza23_contig00026748
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00026748 (212 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003637596.1| Sister chromatid cohesion protein PDS5-like ... 75 4e-12 ref|XP_003637595.1| Sister chromatid cohesion protein PDS5-like ... 75 4e-12 ref|XP_003529677.1| PREDICTED: sister chromatid cohesion protein... 74 1e-11 ref|XP_003550468.1| PREDICTED: sister chromatid cohesion protein... 72 5e-11 ref|XP_003547294.1| PREDICTED: sister chromatid cohesion protein... 55 8e-06 >ref|XP_003637596.1| Sister chromatid cohesion protein PDS5-like protein [Medicago truncatula] gi|355503531|gb|AES84734.1| Sister chromatid cohesion protein PDS5-like protein [Medicago truncatula] Length = 992 Score = 75.5 bits (184), Expect = 4e-12 Identities = 45/71 (63%), Positives = 51/71 (71%), Gaps = 1/71 (1%) Frame = +1 Query: 1 SEEELAGGSNEIRIKGKKY-KKVRPVSRGKRTKKNKSFHYSEESDEENKHDHGERPSEDI 177 SEEEL NEI KGKK KKVR V RGKR KK K+FH+ EESD++ K D+ ER SED Sbjct: 848 SEEELTAVHNEITKKGKKSNKKVRSVPRGKRLKKTKNFHHIEESDDD-KRDYNERISEDR 906 Query: 178 ESVWQCSSEER 210 ESV Q SSEE+ Sbjct: 907 ESVPQYSSEEK 917 >ref|XP_003637595.1| Sister chromatid cohesion protein PDS5-like protein [Medicago truncatula] gi|355503530|gb|AES84733.1| Sister chromatid cohesion protein PDS5-like protein [Medicago truncatula] Length = 995 Score = 75.5 bits (184), Expect = 4e-12 Identities = 45/71 (63%), Positives = 51/71 (71%), Gaps = 1/71 (1%) Frame = +1 Query: 1 SEEELAGGSNEIRIKGKKY-KKVRPVSRGKRTKKNKSFHYSEESDEENKHDHGERPSEDI 177 SEEEL NEI KGKK KKVR V RGKR KK K+FH+ EESD++ K D+ ER SED Sbjct: 851 SEEELTAVHNEITKKGKKSNKKVRSVPRGKRLKKTKNFHHIEESDDD-KRDYNERISEDR 909 Query: 178 ESVWQCSSEER 210 ESV Q SSEE+ Sbjct: 910 ESVPQYSSEEK 920 >ref|XP_003529677.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like [Glycine max] Length = 1641 Score = 73.9 bits (180), Expect = 1e-11 Identities = 44/71 (61%), Positives = 49/71 (69%), Gaps = 1/71 (1%) Frame = +1 Query: 1 SEEELAGGSNEIRIKGKKYKK-VRPVSRGKRTKKNKSFHYSEESDEENKHDHGERPSEDI 177 S+EEL GG NEI K KK K + +SRGKR K K+FHY+EESDEE K D R SED Sbjct: 1492 SDEELTGGFNEIMTKEKKSNKNTKSISRGKRLNKEKNFHYTEESDEE-KQDCSGRLSEDR 1550 Query: 178 ESVWQCSSEER 210 ESV Q SSEER Sbjct: 1551 ESVPQGSSEER 1561 >ref|XP_003550468.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like [Glycine max] Length = 1642 Score = 72.0 bits (175), Expect = 5e-11 Identities = 42/71 (59%), Positives = 50/71 (70%), Gaps = 1/71 (1%) Frame = +1 Query: 1 SEEELAGGSNEIRIKGKK-YKKVRPVSRGKRTKKNKSFHYSEESDEENKHDHGERPSEDI 177 S+EE GG NEI K KK K + VSRGKR KK K+FHY +E++EE K D+ ER SED Sbjct: 1492 SDEEFNGGFNEITTKEKKSNKNTKSVSRGKRLKKEKNFHYRKETNEE-KQDYSERLSEDR 1550 Query: 178 ESVWQCSSEER 210 ESV Q SSEE+ Sbjct: 1551 ESVPQGSSEEK 1561 >ref|XP_003547294.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like [Glycine max] Length = 1656 Score = 54.7 bits (130), Expect = 8e-06 Identities = 34/65 (52%), Positives = 40/65 (61%), Gaps = 7/65 (10%) Frame = +1 Query: 1 SEEELAGGSNEIRIKGKKY-KKVRPVSRGKRTKKNKSFHYSEESDEE------NKHDHGE 159 SE E A GS+ I K KK KK + VSRGK+ KK KS Y +ESDEE K DHGE Sbjct: 1497 SEAEQAEGSDVIVTKQKKSNKKPKSVSRGKKLKKEKSLRYKKESDEEKRESDQEKQDHGE 1556 Query: 160 RPSED 174 R +E+ Sbjct: 1557 RLAEE 1561