BLASTX nr result

ID: Glycyrrhiza23_contig00026748 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026748
         (212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637596.1| Sister chromatid cohesion protein PDS5-like ...    75   4e-12
ref|XP_003637595.1| Sister chromatid cohesion protein PDS5-like ...    75   4e-12
ref|XP_003529677.1| PREDICTED: sister chromatid cohesion protein...    74   1e-11
ref|XP_003550468.1| PREDICTED: sister chromatid cohesion protein...    72   5e-11
ref|XP_003547294.1| PREDICTED: sister chromatid cohesion protein...    55   8e-06

>ref|XP_003637596.1| Sister chromatid cohesion protein PDS5-like protein [Medicago
            truncatula] gi|355503531|gb|AES84734.1| Sister chromatid
            cohesion protein PDS5-like protein [Medicago truncatula]
          Length = 992

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 45/71 (63%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
 Frame = +1

Query: 1    SEEELAGGSNEIRIKGKKY-KKVRPVSRGKRTKKNKSFHYSEESDEENKHDHGERPSEDI 177
            SEEEL    NEI  KGKK  KKVR V RGKR KK K+FH+ EESD++ K D+ ER SED 
Sbjct: 848  SEEELTAVHNEITKKGKKSNKKVRSVPRGKRLKKTKNFHHIEESDDD-KRDYNERISEDR 906

Query: 178  ESVWQCSSEER 210
            ESV Q SSEE+
Sbjct: 907  ESVPQYSSEEK 917


>ref|XP_003637595.1| Sister chromatid cohesion protein PDS5-like protein [Medicago
            truncatula] gi|355503530|gb|AES84733.1| Sister chromatid
            cohesion protein PDS5-like protein [Medicago truncatula]
          Length = 995

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 45/71 (63%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
 Frame = +1

Query: 1    SEEELAGGSNEIRIKGKKY-KKVRPVSRGKRTKKNKSFHYSEESDEENKHDHGERPSEDI 177
            SEEEL    NEI  KGKK  KKVR V RGKR KK K+FH+ EESD++ K D+ ER SED 
Sbjct: 851  SEEELTAVHNEITKKGKKSNKKVRSVPRGKRLKKTKNFHHIEESDDD-KRDYNERISEDR 909

Query: 178  ESVWQCSSEER 210
            ESV Q SSEE+
Sbjct: 910  ESVPQYSSEEK 920


>ref|XP_003529677.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like
            [Glycine max]
          Length = 1641

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 44/71 (61%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
 Frame = +1

Query: 1    SEEELAGGSNEIRIKGKKYKK-VRPVSRGKRTKKNKSFHYSEESDEENKHDHGERPSEDI 177
            S+EEL GG NEI  K KK  K  + +SRGKR  K K+FHY+EESDEE K D   R SED 
Sbjct: 1492 SDEELTGGFNEIMTKEKKSNKNTKSISRGKRLNKEKNFHYTEESDEE-KQDCSGRLSEDR 1550

Query: 178  ESVWQCSSEER 210
            ESV Q SSEER
Sbjct: 1551 ESVPQGSSEER 1561


>ref|XP_003550468.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like
            [Glycine max]
          Length = 1642

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 42/71 (59%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
 Frame = +1

Query: 1    SEEELAGGSNEIRIKGKK-YKKVRPVSRGKRTKKNKSFHYSEESDEENKHDHGERPSEDI 177
            S+EE  GG NEI  K KK  K  + VSRGKR KK K+FHY +E++EE K D+ ER SED 
Sbjct: 1492 SDEEFNGGFNEITTKEKKSNKNTKSVSRGKRLKKEKNFHYRKETNEE-KQDYSERLSEDR 1550

Query: 178  ESVWQCSSEER 210
            ESV Q SSEE+
Sbjct: 1551 ESVPQGSSEEK 1561


>ref|XP_003547294.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like
            [Glycine max]
          Length = 1656

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 34/65 (52%), Positives = 40/65 (61%), Gaps = 7/65 (10%)
 Frame = +1

Query: 1    SEEELAGGSNEIRIKGKKY-KKVRPVSRGKRTKKNKSFHYSEESDEE------NKHDHGE 159
            SE E A GS+ I  K KK  KK + VSRGK+ KK KS  Y +ESDEE       K DHGE
Sbjct: 1497 SEAEQAEGSDVIVTKQKKSNKKPKSVSRGKKLKKEKSLRYKKESDEEKRESDQEKQDHGE 1556

Query: 160  RPSED 174
            R +E+
Sbjct: 1557 RLAEE 1561


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