BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026735
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555199.1| PREDICTED: putative pentatricopeptide repeat...   194   5e-48
ref|XP_003592708.1| Pentatricopeptide repeat protein-like protei...   193   1e-47
ref|XP_002534039.1| pentatricopeptide repeat-containing protein,...   126   2e-27
ref|XP_002307160.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_004142304.1| PREDICTED: putative pentatricopeptide repeat...   116   2e-24

>ref|XP_003555199.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08310, mitochondrial-like [Glycine max]
          Length = 942

 Score =  194 bits (494), Expect = 5e-48
 Identities = 99/161 (61%), Positives = 118/161 (73%)
 Frame = +1

Query: 1   EEIPDEEVDRTRVMVYDAMLTCDVNGGLIDEACRRLQMMIHSKSSSTDGAQMDMDAFLKM 180
           EE+P  E +RT V++Y+A+LTC VN GL+DEACR L+MMI SK+S              +
Sbjct: 368 EEVPGGEEERTLVLIYNAVLTCYVNDGLMDEACRFLRMMIQSKASGD------------V 415

Query: 181 DMDAFLEMKNRLISPNANSFRIVIDGLLKNGRLDFALGLFNDMKRFVGKPDVLIYNNMIN 360
            MD F     +L+ PN  SF IVI+GLLKN +LD AL LFNDMK+FV +P VLIYNN+IN
Sbjct: 416 QMDGFFNKVKKLVFPNGASFSIVINGLLKNDQLDLALSLFNDMKQFVDRPSVLIYNNLIN 475

Query: 361 GLCKSDRLEESYELLREMKESGIEPTRFTYNSIYRCLCKRK 483
            LC S+RLEES ELLREMKESG+EPT FTYNSIY CLCKRK
Sbjct: 476 SLCDSNRLEESRELLREMKESGVEPTHFTYNSIYGCLCKRK 516



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 7/134 (5%)
 Frame = +1

Query: 55  MLTCDVNGGLIDEACRRLQMMIHSKSSSTDGAQMDMDA--FLKM-DMDAFLEMKNRL--- 216
           +L    N    DEA R   +M   +    DG    M A  F K  D+D   E+  R+   
Sbjct: 214 LLQAYCNARRFDEALRVYNVM--REKGWVDGHVCSMLALSFSKWGDVDKAFELVERMEGH 271

Query: 217 -ISPNANSFRIVIDGLLKNGRLDFALGLFNDMKRFVGKPDVLIYNNMINGLCKSDRLEES 393
            +  N  +F ++I G +K GR+D AL LF+ M R    P V +++ +I GLC++     +
Sbjct: 272 GMRLNEKTFCVLIHGFVKEGRVDRALQLFDIMCRVGFTPPVSLFDVLIGGLCRNGDSHRA 331

Query: 394 YELLREMKESGIEP 435
             LL EMKE G+ P
Sbjct: 332 LSLLSEMKEFGVTP 345



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 23/85 (27%), Positives = 50/85 (58%)
 Frame = +1

Query: 223 PNANSFRIVIDGLLKNGRLDFALGLFNDMKRFVGKPDVLIYNNMINGLCKSDRLEESYEL 402
           P+  ++ ++ID   KNG +D A+ L + M     +P+V+ Y+ +++G C+++R +++  +
Sbjct: 640 PSVVTYNLLIDSWCKNGSVDKAMALLSRMSGEDREPNVITYSTLVDGFCRAERPDDALLV 699

Query: 403 LREMKESGIEPTRFTYNSIYRCLCK 477
             EM+  G  P +  + ++   LCK
Sbjct: 700 WNEMERKGCFPNQIAFMALIYGLCK 724


>ref|XP_003592708.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
           gi|355481756|gb|AES62959.1| Pentatricopeptide repeat
           protein-like protein [Medicago truncatula]
          Length = 1430

 Score =  193 bits (490), Expect = 1e-47
 Identities = 102/162 (62%), Positives = 122/162 (75%), Gaps = 1/162 (0%)
 Frame = +1

Query: 1   EEIPD-EEVDRTRVMVYDAMLTCDVNGGLIDEACRRLQMMIHSKSSSTDGAQMDMDAFLK 177
           EEIP+ EE ++T V++Y+A+LTC VN GL+DEA R ++MMI SKSS TD  +  MD F K
Sbjct: 358 EEIPEGEEDEQTLVLIYNALLTCYVNDGLMDEAYRLIRMMIQSKSS-TDSDENRMDVFFK 416

Query: 178 MDMDAFLEMKNRLISPNANSFRIVIDGLLKNGRLDFALGLFNDMKRFVGKPDVLIYNNMI 357
                      R++ PN  SF IVIDG LKN +LD AL LFNDM+RFV KP +LIYNN+I
Sbjct: 417 T--------VKRMVFPNITSFSIVIDGFLKNDQLDLALSLFNDMRRFVDKPTILIYNNLI 468

Query: 358 NGLCKSDRLEESYELLREMKESGIEPTRFTYNSIYRCLCKRK 483
           + LCKS+RLE+SYELLREMKE GIEPT FTYNSIY CLCKRK
Sbjct: 469 DSLCKSNRLEKSYELLREMKELGIEPTHFTYNSIYGCLCKRK 510



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/97 (30%), Positives = 55/97 (56%)
 Frame = +1

Query: 187 DAFLEMKNRLISPNANSFRIVIDGLLKNGRLDFALGLFNDMKRFVGKPDVLIYNNMINGL 366
           D F E+  R +SP+  ++ + ID   KNG +D A+     M +    P V+ Y  +++G 
Sbjct: 622 DLFHELVKRGLSPSVVTYNLFIDCWCKNGNVDKAMAHLFRMTKEDKVPSVVTYTTLVDGF 681

Query: 367 CKSDRLEESYELLREMKESGIEPTRFTYNSIYRCLCK 477
           CK +R +++  L +EM+++G  P + T+ ++   LCK
Sbjct: 682 CKEERPDDAILLFKEMEKNGCPPNQITFMALIYGLCK 718



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/85 (35%), Positives = 47/85 (55%)
 Frame = +1

Query: 223 PNANSFRIVIDGLLKNGRLDFALGLFNDMKRFVGKPDVLIYNNMINGLCKSDRLEESYEL 402
           P+  S+   I GL+    +D A+ +F D+      PDV+ +N +I GLCK +R  E+ +L
Sbjct: 564 PDIVSYSAAIGGLVNIQEVDHAMKIFKDLWSHGHCPDVVCFNVLIRGLCKVNRFTEAEDL 623

Query: 403 LREMKESGIEPTRFTYNSIYRCLCK 477
             E+ + G+ P+  TYN    C CK
Sbjct: 624 FHELVKRGLSPSVVTYNLFIDCWCK 648



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
 Frame = +1

Query: 235 SFRIVIDGLLKNGRLDFALGLFNDMKRFVG-KPDVLIYNNMINGLCKSDRLEESYELLRE 411
           +F ++I G +K  R+D AL LF+ M+R     PDV +Y+ +I GLCK+   + +  L  E
Sbjct: 267 TFCVLIHGFVKESRVDKALQLFDKMRREDSFTPDVSLYDVLIGGLCKNKDTDRAISLFSE 326

Query: 412 MKESGIEPTRFTYNSIYRCLCKRK 483
           MKE G+ P       +  C    K
Sbjct: 327 MKEFGVRPDIGILTKLISCFSDSK 350


>ref|XP_002534039.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223525946|gb|EEF28343.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 634

 Score =  126 bits (317), Expect = 2e-27
 Identities = 72/161 (44%), Positives = 103/161 (63%)
 Frame = +1

Query: 1   EEIPDEEVDRTRVMVYDAMLTCDVNGGLIDEACRRLQMMIHSKSSSTDGAQMDMDAFLKM 180
           E + D  ++ T+ ++ +++L+  VN GLID+AC  L+ M+        G   D D   K+
Sbjct: 171 ETLEDMNIE-TQTLLCNSVLSSLVNSGLIDKACCLLRNMM--------GNGDDDDVQYKL 221

Query: 181 DMDAFLEMKNRLISPNANSFRIVIDGLLKNGRLDFALGLFNDMKRFVGKPDVLIYNNMIN 360
                   ++  I PN  SF IVI+GL++  +LD A+ LF DM       D+L+YNN+IN
Sbjct: 222 -------FRDEKIRPNTASFSIVINGLMQACKLDLAVCLFQDMAEIGCNRDLLLYNNLIN 274

Query: 361 GLCKSDRLEESYELLREMKESGIEPTRFTYNSIYRCLCKRK 483
           GLC SDRLEESY+LL+EM+ESG +PT+FT NSI+ CLCKR+
Sbjct: 275 GLCNSDRLEESYKLLKEMEESGFKPTQFTLNSIFGCLCKRQ 315



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/95 (32%), Positives = 50/95 (52%)
 Frame = +1

Query: 193 FLEMKNRLISPNANSFRIVIDGLLKNGRLDFALGLFNDMKRFVGKPDVLIYNNMINGLCK 372
           F EM  + + P+  ++ ++IDG  KNG +D A+     M     +P+V  Y  +I+GLCK
Sbjct: 429 FNEMVMKGLIPSVVTYNLLIDGWCKNGCIDDAMNCLCSMSAKEREPNVFTYTTLIDGLCK 488

Query: 373 SDRLEESYELLREMKESGIEPTRFTYNSIYRCLCK 477
           + R +++  L  EM+  G  P R  +      LCK
Sbjct: 489 AGRPDDAVMLWNEMRRRGCRPNRVAFMGFIHGLCK 523



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/92 (34%), Positives = 52/92 (56%)
 Frame = +1

Query: 184 MDAFLEMKNRLISPNANSFRIVIDGLLKNGRLDFALGLFNDMKRFVGKPDVLIYNNMING 363
           M+    M  +   PN  ++  +IDGL K GR D A+ L+N+M+R   +P+ + +   I+G
Sbjct: 461 MNCLCSMSAKEREPNVFTYTTLIDGLCKAGRPDDAVMLWNEMRRRGCRPNRVAFMGFIHG 520

Query: 364 LCKSDRLEESYELLREMKESGIEPTRFTYNSI 459
           LCK D+ E +     EM+E  +EP  + Y S+
Sbjct: 521 LCKCDKPEAALIHFHEMEEEEMEPDTYVYISL 552



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 30/85 (35%), Positives = 47/85 (55%)
 Frame = +1

Query: 223 PNANSFRIVIDGLLKNGRLDFALGLFNDMKRFVGKPDVLIYNNMINGLCKSDRLEESYEL 402
           PN  ++  ++ GL++   +D AL LF D+      PDV+ YN ++ GL ++ R EE+  L
Sbjct: 369 PNIIAYSALLGGLIEVQEVDQALKLFKDISARGRCPDVIAYNILMKGLYEAHRTEEARNL 428

Query: 403 LREMKESGIEPTRFTYNSIYRCLCK 477
             EM   G+ P+  TYN +    CK
Sbjct: 429 FNEMVMKGLIPSVVTYNLLIDGWCK 453


>ref|XP_002307160.1| predicted protein [Populus trichocarpa] gi|222856609|gb|EEE94156.1|
           predicted protein [Populus trichocarpa]
          Length = 726

 Score =  117 bits (293), Expect = 1e-24
 Identities = 66/160 (41%), Positives = 98/160 (61%)
 Frame = +1

Query: 1   EEIPDEEVDRTRVMVYDAMLTCDVNGGLIDEACRRLQMMIHSKSSSTDGAQMDMDAFLKM 180
           EE+ ++   +   ++Y+++L   V+ G + +A   LQ +        DG           
Sbjct: 261 EEMHEDMDPKASTLLYNSVLNSLVDNGSVHKAYHLLQAITIGNCIG-DG----------- 308

Query: 181 DMDAFLEMKNRLISPNANSFRIVIDGLLKNGRLDFALGLFNDMKRFVGKPDVLIYNNMIN 360
           ++      K  ++ PN+ +F IVI+GL+K G LD A+GLF DM R   KPD+L+YNN+I+
Sbjct: 309 EIGKLFRGK-AMVPPNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLID 367

Query: 361 GLCKSDRLEESYELLREMKESGIEPTRFTYNSIYRCLCKR 480
           GLC S+RL+ES  LL+EM+ESGIEPT FT N I+ CLC+R
Sbjct: 368 GLCTSNRLQESCGLLQEMEESGIEPTSFTNNCIFGCLCRR 407



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 37/94 (39%), Positives = 56/94 (59%)
 Frame = +1

Query: 196 LEMKNRLISPNANSFRIVIDGLLKNGRLDFALGLFNDMKRFVGKPDVLIYNNMINGLCKS 375
           ++M      P+  ++   +DGL+K   +D AL LF D+      PDV+ YN +I GLCK+
Sbjct: 453 VDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVIAYNILIKGLCKT 512

Query: 376 DRLEESYELLREMKESGIEPTRFTYNSIYRCLCK 477
            R+ E+  LL EM+E G+ P+  TYN++   LCK
Sbjct: 513 QRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCK 546



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 43/133 (32%), Positives = 68/133 (51%), Gaps = 2/133 (1%)
 Frame = +1

Query: 82  LIDEACRRLQMMIHSKSSSTDGAQ--MDMDAFLKMDMDAFLEMKNRLISPNANSFRIVID 255
           L+D A    Q  I + S+  DG     ++D  LK+    F ++  +   P+  ++ I+I 
Sbjct: 452 LVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKL----FQDICAQGYCPDVIAYNILIK 507

Query: 256 GLLKNGRLDFALGLFNDMKRFVGKPDVLIYNNMINGLCKSDRLEESYELLREMKESGIEP 435
           GL K  R+  A  L ++M+     P  + YN +I+GLCK+D LEE+   L  M E   EP
Sbjct: 508 GLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMMIEKEREP 567

Query: 436 TRFTYNSIYRCLC 474
              TY+++   LC
Sbjct: 568 NVITYSTLINGLC 580


>ref|XP_004142304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08310, mitochondrial-like [Cucumis sativus]
           gi|449510601|ref|XP_004163711.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein At5g08310,
           mitochondrial-like [Cucumis sativus]
          Length = 849

 Score =  116 bits (291), Expect = 2e-24
 Identities = 66/163 (40%), Positives = 98/163 (60%), Gaps = 3/163 (1%)
 Frame = +1

Query: 4   EIPDEEVDRTRVMVYDAMLTCDVNGGLIDEACRRLQMMIHSKSSSTDGAQMDMDAFLKMD 183
           E P +  D   + +++++L   VN G ++  C  LQ+M+ ++S S +   +D+    K  
Sbjct: 389 ERPKDINDEGMIFLFNSVLKFLVNAGKVESTCYLLQLMMGNESRSDNIHILDIHQTFKK- 447

Query: 184 MDAFLEMKNRLISPNANSFRIVIDGLLKNGRL---DFALGLFNDMKRFVGKPDVLIYNNM 354
                      + PN  SF IVI GLLK       D AL LF DM +   + D L+YNN+
Sbjct: 448 -----------LLPNTASFNIVIHGLLKTTSKLDQDAALSLFEDMVQLGCERDQLLYNNL 496

Query: 355 INGLCKSDRLEESYELLREMKESGIEPTRFTYNSIYRCLCKRK 483
           I+ LCKSDRL+ESY+LLR+M++S ++PT FTYNSI+ CLC+R+
Sbjct: 497 IDALCKSDRLKESYKLLRDMEQSRLQPTHFTYNSIFGCLCRRE 539



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 31/85 (36%), Positives = 52/85 (61%)
 Frame = +1

Query: 223 PNANSFRIVIDGLLKNGRLDFALGLFNDMKRFVGKPDVLIYNNMINGLCKSDRLEESYEL 402
           P+  S+   +DGL+K  +LD AL LF D+     +PDV+ +N +I G CK+ ++ E+Y  
Sbjct: 593 PDIVSYSAAMDGLVKINKLDRALELFQDICTRGCRPDVVSHNILIKGYCKAGKVNEAYNF 652

Query: 403 LREMKESGIEPTRFTYNSIYRCLCK 477
           L +M+ +G+ P+  +YN +    CK
Sbjct: 653 LHKMRVAGLVPSAVSYNLLINEWCK 677



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/85 (37%), Positives = 48/85 (56%)
 Frame = +1

Query: 223 PNANSFRIVIDGLLKNGRLDFALGLFNDMKRFVGKPDVLIYNNMINGLCKSDRLEESYEL 402
           P+A S+ ++I+   KNG +D A+   + M     KP ++ Y  +ING C S R +++  L
Sbjct: 663 PSAVSYNLLINEWCKNGDIDKAILCLSQMNEENKKPTIISYTTLINGCCNSGRPDDAKIL 722

Query: 403 LREMKESGIEPTRFTYNSIYRCLCK 477
             EM+E G  P R TY +I   LCK
Sbjct: 723 WNEMQEKGCSPNRITYMAIVHGLCK 747